RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 RRP1P56182 461 aaKnown RBP13.33□□□□□ -0.28
CCDC47-206ENST00000584112 CCNA1P78396 465 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 PKN1Q16512 942 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 LRRFIP1Q32MZ4 808 aaKnown RBP13.33□□□□□ -0.28
CCDC47-206ENST00000584112 SLFNL1Q499Z3 407 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 OLFML2BQ68BL8 750 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 CATSPERGQ6ZRH7 1159 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 FRMD5Q7Z6J6 570 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 RNF135Q8IUD6 432 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 KBTBD3Q8NAB2 608 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 ACER1Q8TDN7 264 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 VWCEQ96DN2 955 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 CCDC17Q96LX7 622 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 SH2D4AQ9H788 454 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 ARHGEF10LQ9HCE6 1279 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 RABGAP1Q9Y3P9 1069 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 SLC4A4Q9Y6R1 1079 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 ZNF236Q9UL36 1845 aa13.33□□□□□ -0.28
CCDC47-206ENST00000584112 USP17L12C9JPN9 530 aa13.32□□□□□ -0.28
CCDC47-206ENST00000584112 USP17L21D6R901 530 aa13.32□□□□□ -0.28
CCDC47-206ENST00000584112 KDM4AO75164 1064 aa13.32□□□□□ -0.28
CCDC47-206ENST00000584112 ZFYP08048 801 aaPredicted RBP13.32□□□□□ -0.28
CCDC47-206ENST00000584112 RARBP10826 455 aa13.32□□□□□ -0.28
CCDC47-206ENST00000584112 NBL1P41271 181 aa13.32□□□□□ -0.28
CCDC47-206ENST00000584112 CDK7P50613 346 aa13.32□□□□□ -0.28
CCDC47-206ENST00000584112 TTLL4Q14679 1199 aa13.32□□□□□ -0.28
CCDC47-206ENST00000584112 C12orf60Q5U649 245 aa13.32□□□□□ -0.28
CCDC47-206ENST00000584112 LBX2Q6XYB7 198 aa13.32□□□□□ -0.28
CCDC47-206ENST00000584112 DPP9Q86TI2 863 aa13.32□□□□□ -0.28
CCDC47-206ENST00000584112 NEK9Q8TD19 979 aa13.32□□□□□ -0.28
CCDC47-206ENST00000584112 PUS7LQ9H0K6 701 aaKnown RBP13.32□□□□□ -0.28
CCDC47-206ENST00000584112 ARPP21Q9UBL0 812 aaPredicted RBP13.32□□□□□ -0.28
CCDC47-206ENST00000584112 IVNS1ABPQ9Y6Y0 642 aa13.32□□□□□ -0.28
CCDC47-206ENST00000584112 TTC41PQ6P2S7 1318 aa13.32□□□□□ -0.28
CCDC47-206ENST00000584112 CHGBP05060 677 aa13.31□□□□□ -0.28
CCDC47-206ENST00000584112 AVPR2P30518 371 aa13.31□□□□□ -0.28
CCDC47-206ENST00000584112 CDK8P49336 464 aa13.31□□□□□ -0.28
CCDC47-206ENST00000584112 IRX5P78411 483 aaPredicted RBP13.31□□□□□ -0.28
CCDC47-206ENST00000584112 EVX2Q03828 476 aa13.31□□□□□ -0.28
CCDC47-206ENST00000584112 C16orf86Q6ZW13 317 aa13.31□□□□□ -0.28
CCDC47-206ENST00000584112 DYNLL2Q96FJ2 89 aa13.31□□□□□ -0.28
CCDC47-206ENST00000584112 RPAP3Q9H6T3 665 aaPredicted RBP13.31□□□□□ -0.28
CCDC47-206ENST00000584112 ZBTB47Q9UFB7 747 aaPredicted RBP13.31□□□□□ -0.28
CCDC47-206ENST00000584112 PRKAG3Q9UGI9 489 aa13.31□□□□□ -0.28
CCDC47-206ENST00000584112 PCDHB15Q9Y5E8 787 aa13.31□□□□□ -0.28
CCDC47-206ENST00000584112 RNF113AO15541 343 aaKnown RBP13.3□□□□□ -0.28
CCDC47-206ENST00000584112 COBLO75128 1261 aa13.3□□□□□ -0.28
CCDC47-206ENST00000584112 ADORA2AP29274 412 aa13.3□□□□□ -0.28
CCDC47-206ENST00000584112 DSG3P32926 999 aa13.3□□□□□ -0.28
CCDC47-206ENST00000584112 ICA1Q05084 483 aa13.3□□□□□ -0.28
CCDC47-206ENST00000584112 PUS10Q3MIT2 529 aaKnown RBP13.3□□□□□ -0.28
CCDC47-206ENST00000584112 GIMAP6Q6P9H5 292 aa13.3□□□□□ -0.28
CCDC47-206ENST00000584112 APPBP2Q92624 585 aa13.3□□□□□ -0.28
CCDC47-206ENST00000584112 TANGO6Q9C0B7 1094 aa13.3□□□□□ -0.28
CCDC47-206ENST00000584112 HOXC10Q9NYD6 342 aa13.3□□□□□ -0.28
CCDC47-206ENST00000584112 CYP2D7A0A087X1C5 515 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 A0A1W2PRG0 241 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 SPDYE16A6NNV3 312 aaPredicted RBP13.29□□□□□ -0.28
CCDC47-206ENST00000584112 ADAMTS4O75173 837 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 AKR1B1P15121 316 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 TAL1P17542 331 aaPredicted RBP13.29□□□□□ -0.28
CCDC47-206ENST00000584112 GNAT2P19087 354 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 COG2Q14746 738 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 KCNA10Q16322 511 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 SBK1Q52WX2 424 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 TSHZ3Q63HK5 1081 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 CTR9Q6PD62 1173 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 FAM126BQ8IXS8 530 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 NUP133Q8WUM0 1156 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 NKD2Q969F2 451 aaPredicted RBP13.29□□□□□ -0.28
CCDC47-206ENST00000584112 STRBPQ96SI9 672 aaKnown RBP13.29□□□□□ -0.28
CCDC47-206ENST00000584112 LMCD1Q9NZU5 365 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 BTBD7Q9P203 1132 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 TMX2Q9Y320 296 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 SCN5AQ14524 2016 aa13.29□□□□□ -0.28
CCDC47-206ENST00000584112 MYO7AQ13402 2215 aa13.28□□□□□ -0.28
CCDC47-206ENST00000584112 MYADML2A6NDP7 307 aa13.28□□□□□ -0.28
CCDC47-206ENST00000584112 EP400NLQ6ZTU2 488 aa13.28□□□□□ -0.28
CCDC47-206ENST00000584112 MB21D1Q8N884 522 aa13.28□□□□□ -0.28
CCDC47-206ENST00000584112 OSBP2Q969R2 916 aa13.28□□□□□ -0.28
CCDC47-206ENST00000584112 WNT8AQ9H1J5 351 aa13.28□□□□□ -0.28
CCDC47-206ENST00000584112 HIPK3Q9H422 1215 aa13.28□□□□□ -0.28
CCDC47-206ENST00000584112 VCPKMTQ9H867 229 aa13.28□□□□□ -0.28
CCDC47-206ENST00000584112 KANSL2Q9H9L4 492 aa13.28□□□□□ -0.28
CCDC47-206ENST00000584112 MTUS1Q9ULD2 1270 aa13.28□□□□□ -0.28
CCDC47-206ENST00000584112 MROH7Q68CQ1 1323 aa13.28□□□□□ -0.28
CCDC47-206ENST00000584112 GCN1Q92616 2671 aaKnown RBP13.28□□□□□ -0.28
CCDC47-206ENST00000584112 ROBO3Q96MS0 1386 aa13.28□□□□□ -0.28
CCDC47-206ENST00000584112 LCHNA4D1U4 455 aa13.27□□□□□ -0.29
CCDC47-206ENST00000584112 GSG1L2A8MUP6 293 aa13.27□□□□□ -0.29
CCDC47-206ENST00000584112 WDR46O15213 610 aaKnown RBP13.27□□□□□ -0.29
CCDC47-206ENST00000584112 GPAA1O43292 621 aa13.27□□□□□ -0.29
CCDC47-206ENST00000584112 MX1P20591 662 aa13.27□□□□□ -0.29
CCDC47-206ENST00000584112 AAMPQ13685 434 aa13.27□□□□□ -0.29
CCDC47-206ENST00000584112 PUM1Q14671 1186 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCDC47-206ENST00000584112 PI4K2BQ8TCG2 481 aa13.27□□□□□ -0.29
CCDC47-206ENST00000584112 VTI1AQ96AJ9 217 aa13.27□□□□□ -0.29
CCDC47-206ENST00000584112 SCLYQ96I15 445 aa13.27□□□□□ -0.29
CCDC47-206ENST00000584112 CRBNQ96SW2 442 aa13.27□□□□□ -0.29
CCDC47-206ENST00000584112 TSEN34Q9BSV6 310 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms