RNA–Protein interactions for RNA: ENST00000583818.1

TSEN54-211, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 765 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-211ENST00000583818 ASTN1O14525 1302 aa19.68■□□□□ 0.74
TSEN54-211ENST00000583818 PALM3A6NDB9 673 aaPredicted RBP19.67■□□□□ 0.74
TSEN54-211ENST00000583818 SNAI1O95863 264 aaPredicted RBP19.67■□□□□ 0.74
TSEN54-211ENST00000583818 CPA1P15085 419 aa19.67■□□□□ 0.74
TSEN54-211ENST00000583818 TROAPQ12815 778 aa19.67■□□□□ 0.74
TSEN54-211ENST00000583818 BAATQ14032 418 aaPredicted RBP19.67■□□□□ 0.74
TSEN54-211ENST00000583818 SLC30A10Q6XR72 485 aa19.67■□□□□ 0.74
TSEN54-211ENST00000583818 NFXL1Q6ZNB6 911 aa19.67■□□□□ 0.74
TSEN54-211ENST00000583818 CATIPQ7Z7H3 387 aa19.67■□□□□ 0.74
TSEN54-211ENST00000583818 ZNF654Q8IZM8 581 aa19.67■□□□□ 0.74
TSEN54-211ENST00000583818 FAM133AQ8N9E0 248 aa19.67■□□□□ 0.74
TSEN54-211ENST00000583818 NEK1Q96PY6 1258 aa19.67■□□□□ 0.74
TSEN54-211ENST00000583818 BAZ2BQ9UIF8 2168 aaKnown RBP19.67■□□□□ 0.74
TSEN54-211ENST00000583818 PTPDC1A2A3K4 754 aa19.66■□□□□ 0.74
TSEN54-211ENST00000583818 MYCNP04198 464 aaPredicted RBP19.66■□□□□ 0.74
TSEN54-211ENST00000583818 ARMCX2Q7L311 632 aa19.66■□□□□ 0.74
TSEN54-211ENST00000583818 HOMER1Q86YM7 354 aa19.66■□□□□ 0.74
TSEN54-211ENST00000583818 CCDC144CPQ8IYA2 1237 aa19.66■□□□□ 0.74
TSEN54-211ENST00000583818 PIBF1Q8WXW3 757 aa19.66■□□□□ 0.74
TSEN54-211ENST00000583818 ZHX1Q9UKY1 873 aaPredicted RBP19.66■□□□□ 0.74
TSEN54-211ENST00000583818 PFASO15067 1338 aa19.66■□□□□ 0.74
TSEN54-211ENST00000583818 MYH6P13533 1939 aa19.66■□□□□ 0.74
TSEN54-211ENST00000583818 SEPT4O43236 478 aa19.65■□□□□ 0.74
TSEN54-211ENST00000583818 ZNF865P0CJ78 1059 aaPredicted RBP19.65■□□□□ 0.74
TSEN54-211ENST00000583818 CALML3P27482 149 aa19.65■□□□□ 0.74
TSEN54-211ENST00000583818 TBC1D5Q92609 795 aa19.65■□□□□ 0.74
TSEN54-211ENST00000583818 TMEM87BQ96K49 555 aa19.65■□□□□ 0.74
TSEN54-211ENST00000583818 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.65■□□□□ 0.74
TSEN54-211ENST00000583818 SNX14Q9Y5W7 946 aa19.65■□□□□ 0.74
TSEN54-211ENST00000583818 WDR19Q8NEZ3 1342 aa19.65■□□□□ 0.74
TSEN54-211ENST00000583818 CCDC69A6NI79 296 aa19.64■□□□□ 0.73
TSEN54-211ENST00000583818 CYTH3O43739 400 aa19.64■□□□□ 0.73
TSEN54-211ENST00000583818 PPP1R11O60927 126 aaPredicted RBP19.64■□□□□ 0.73
TSEN54-211ENST00000583818 HSPA4P34932 840 aa19.64■□□□□ 0.73
TSEN54-211ENST00000583818 MAMDC4Q6UXC1 1216 aa19.64■□□□□ 0.73
TSEN54-211ENST00000583818 FBXO11Q86XK2 927 aa19.64■□□□□ 0.73
TSEN54-211ENST00000583818 PIGSQ96S52 555 aa19.64■□□□□ 0.73
TSEN54-211ENST00000583818 CNPY2Q9Y2B0 182 aa19.64■□□□□ 0.73
TSEN54-211ENST00000583818 SYNGAP1Q96PV0 1343 aa19.63■□□□□ 0.73
TSEN54-211ENST00000583818 REC8O95072 547 aa19.63■□□□□ 0.73
TSEN54-211ENST00000583818 EXOSC10Q01780 885 aaKnown RBP19.63■□□□□ 0.73
TSEN54-211ENST00000583818 TSGA10IPQ3SY00 556 aa19.63■□□□□ 0.73
TSEN54-211ENST00000583818 GJC2Q5T442 439 aaPredicted RBP19.63■□□□□ 0.73
TSEN54-211ENST00000583818 RNF207Q6ZRF8 634 aa19.63■□□□□ 0.73
TSEN54-211ENST00000583818 ZNF467Q7Z7K2 595 aaPredicted RBP19.63■□□□□ 0.73
TSEN54-211ENST00000583818 CMTR1Q8N1G2 835 aaKnown RBP19.63■□□□□ 0.73
TSEN54-211ENST00000583818 JAKMIP1Q96N16 626 aaKnown RBP19.63■□□□□ 0.73
TSEN54-211ENST00000583818 ADCY6O43306 1168 aa19.62■□□□□ 0.73
TSEN54-211ENST00000583818 DDAH1O94760 285 aa19.62■□□□□ 0.73
TSEN54-211ENST00000583818 PLEKHA8P1O95397 391 aa19.62■□□□□ 0.73
TSEN54-211ENST00000583818 PTGS1P23219 599 aa19.62■□□□□ 0.73
TSEN54-211ENST00000583818 RPS6P62753 249 aaKnown RBP19.62■□□□□ 0.73
TSEN54-211ENST00000583818 DHX32Q7L7V1 743 aaKnown RBP19.62■□□□□ 0.73
TSEN54-211ENST00000583818 EEPD1Q7L9B9 569 aa19.62■□□□□ 0.73
TSEN54-211ENST00000583818 NECAB2Q7Z6G3 386 aa19.62■□□□□ 0.73
TSEN54-211ENST00000583818 ANKLE1Q8NAG6 615 aa19.62■□□□□ 0.73
TSEN54-211ENST00000583818 DPF3Q92784 378 aa19.62■□□□□ 0.73
TSEN54-211ENST00000583818 PCDH10Q9P2E7 1040 aa19.62■□□□□ 0.73
TSEN54-211ENST00000583818 DNAH12Q6ZR08 3092 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 ALPK3Q96L96 1907 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 ABCB11O95342 1321 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 MSCO60682 206 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 PGK1P00558 417 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 LIFRP42702 1097 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 IRX5P78411 483 aaPredicted RBP19.61■□□□□ 0.73
TSEN54-211ENST00000583818 ACVR2BQ13705 512 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 MICU3Q86XE3 530 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 MSL3Q8N5Y2 521 aaKnown RBP19.61■□□□□ 0.73
TSEN54-211ENST00000583818 CTCFLQ8NI51 663 aaPredicted RBP19.61■□□□□ 0.73
TSEN54-211ENST00000583818 KCNB2Q92953 911 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 MTMR8Q96EF0 704 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 KATNBL1Q9H079 304 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 C11orf49Q9H6J7 331 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 RIOX1Q9H6W3 641 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 SLC12A7Q9Y666 1083 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 LRRC37A2A6NM11 1700 aa19.61■□□□□ 0.73
TSEN54-211ENST00000583818 ZBTB5O15062 677 aa19.6■□□□□ 0.73
TSEN54-211ENST00000583818 AKR1A1P14550 325 aa19.6■□□□□ 0.73
TSEN54-211ENST00000583818 ALDH5A1P51649 535 aaPredicted RBP19.6■□□□□ 0.73
TSEN54-211ENST00000583818 KRT32Q14532 448 aa19.6■□□□□ 0.73
TSEN54-211ENST00000583818 CCDC144BQ3MJ40 725 aa19.6■□□□□ 0.73
TSEN54-211ENST00000583818 FBXO16Q8IX29 292 aaPredicted RBP19.6■□□□□ 0.73
TSEN54-211ENST00000583818 MTA3Q9BTC8 594 aa19.6■□□□□ 0.73
TSEN54-211ENST00000583818 XPNPEP3Q9NQH7 507 aa19.6■□□□□ 0.73
TSEN54-211ENST00000583818 COL20A1Q9P218 1284 aa19.6■□□□□ 0.73
TSEN54-211ENST00000583818 NRBP1Q9UHY1 535 aa19.6■□□□□ 0.73
TSEN54-211ENST00000583818 BRPF3Q9ULD4 1205 aa19.6■□□□□ 0.73
TSEN54-211ENST00000583818 CEP290O15078 2479 aa19.6■□□□□ 0.73
TSEN54-211ENST00000583818 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.59■□□□□ 0.73
TSEN54-211ENST00000583818 hCG_1642624A0A1W2PR95 340 aa19.59■□□□□ 0.73
TSEN54-211ENST00000583818 OPLAHO14841 1288 aa19.59■□□□□ 0.73
TSEN54-211ENST00000583818 RARBP10826 455 aa19.59■□□□□ 0.73
TSEN54-211ENST00000583818 TMEM63BQ5T3F8 832 aa19.59■□□□□ 0.73
TSEN54-211ENST00000583818 TMTC2Q8N394 836 aa19.59■□□□□ 0.73
TSEN54-211ENST00000583818 CCDC82Q8N4S0 544 aa19.59■□□□□ 0.73
TSEN54-211ENST00000583818 SRBD1Q8N5C6 995 aaKnown RBP19.59■□□□□ 0.73
TSEN54-211ENST00000583818 HTATIP2Q9BUP3 242 aa19.59■□□□□ 0.73
TSEN54-211ENST00000583818 AMNQ9BXJ7 453 aa19.59■□□□□ 0.73
TSEN54-211ENST00000583818 USP26Q9BXU7 913 aa19.59■□□□□ 0.73
TSEN54-211ENST00000583818 SENP6Q9GZR1 1112 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms