RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 COL6A1P12109 1028 aa16.29■□□□□ 0.2
GGA3-215ENST00000582821 LIFRP42702 1097 aa16.29■□□□□ 0.2
GGA3-215ENST00000582821 CNTN2Q02246 1040 aa16.29■□□□□ 0.2
GGA3-215ENST00000582821 GRM4Q14833 912 aa16.29■□□□□ 0.2
GGA3-215ENST00000582821 ARRDC4Q8NCT1 418 aa16.29■□□□□ 0.2
GGA3-215ENST00000582821 DIS3LQ8TF46 1054 aaKnown RBP16.29■□□□□ 0.2
GGA3-215ENST00000582821 KCNB2Q92953 911 aa16.29■□□□□ 0.2
GGA3-215ENST00000582821 MTMR8Q96EF0 704 aa16.29■□□□□ 0.2
GGA3-215ENST00000582821 MAP3K14Q99558 947 aa16.29■□□□□ 0.2
GGA3-215ENST00000582821 ABHD16BQ9H3Z7 469 aa16.29■□□□□ 0.2
GGA3-215ENST00000582821 JMJD4Q9H9V9 463 aa16.29■□□□□ 0.2
GGA3-215ENST00000582821 LY9Q9HBG7 655 aa16.29■□□□□ 0.2
GGA3-215ENST00000582821 LOC102724159A0A0B4J2E5 919 aa16.28■□□□□ 0.2
GGA3-215ENST00000582821 ASB14A6NK59 587 aa16.28■□□□□ 0.2
GGA3-215ENST00000582821 EPB41L2O43491 1005 aaKnown RBP16.28■□□□□ 0.2
GGA3-215ENST00000582821 TAL1P17542 331 aaPredicted RBP16.28■□□□□ 0.2
GGA3-215ENST00000582821 PWP2Q15269 919 aaKnown RBP16.28■□□□□ 0.2
GGA3-215ENST00000582821 CDC37Q16543 378 aaPredicted RBP16.28■□□□□ 0.2
GGA3-215ENST00000582821 NSMFQ6X4W1 530 aa16.28■□□□□ 0.2
GGA3-215ENST00000582821 ARMCX2Q7L311 632 aa16.28■□□□□ 0.2
GGA3-215ENST00000582821 CATIPQ7Z7H3 387 aa16.28■□□□□ 0.2
GGA3-215ENST00000582821 C11orf49Q9H6J7 331 aa16.28■□□□□ 0.2
GGA3-215ENST00000582821 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.28■□□□□ 0.2
GGA3-215ENST00000582821 DNAH12Q6ZR08 3092 aa16.28■□□□□ 0.2
GGA3-215ENST00000582821 LCTP09848 1927 aa16.27■□□□□ 0.2
GGA3-215ENST00000582821 NFIBO00712 420 aa16.27■□□□□ 0.2
GGA3-215ENST00000582821 SH2B2O14492 632 aaPredicted RBP16.27■□□□□ 0.2
GGA3-215ENST00000582821 AKR1A1P14550 325 aa16.27■□□□□ 0.2
GGA3-215ENST00000582821 EXOSC10Q01780 885 aaKnown RBP16.27■□□□□ 0.2
GGA3-215ENST00000582821 ACVR2BQ13705 512 aa16.27■□□□□ 0.2
GGA3-215ENST00000582821 BAATQ14032 418 aaPredicted RBP16.27■□□□□ 0.2
GGA3-215ENST00000582821 KRT32Q14532 448 aa16.27■□□□□ 0.2
GGA3-215ENST00000582821 QRICH1Q2TAL8 776 aa16.27■□□□□ 0.2
GGA3-215ENST00000582821 CCDC144CPQ8IYA2 1237 aa16.27■□□□□ 0.2
GGA3-215ENST00000582821 RASEFQ8IZ41 740 aa16.27■□□□□ 0.2
GGA3-215ENST00000582821 MORC4Q8TE76 937 aa16.27■□□□□ 0.2
GGA3-215ENST00000582821 DPF3Q92784 378 aa16.27■□□□□ 0.2
GGA3-215ENST00000582821 NEK1Q96PY6 1258 aa16.27■□□□□ 0.2
GGA3-215ENST00000582821 KATNBL1Q9H079 304 aa16.27■□□□□ 0.2
GGA3-215ENST00000582821 RIOX1Q9H6W3 641 aa16.27■□□□□ 0.2
GGA3-215ENST00000582821 ABCB11O95342 1321 aa16.26■□□□□ 0.19
GGA3-215ENST00000582821 ALPK3Q96L96 1907 aa16.26■□□□□ 0.19
GGA3-215ENST00000582821 DNM1LO00429 736 aa16.26■□□□□ 0.19
GGA3-215ENST00000582821 DDAH1O94760 285 aa16.26■□□□□ 0.19
GGA3-215ENST00000582821 REC8O95072 547 aa16.26■□□□□ 0.19
GGA3-215ENST00000582821 SMARCA1P28370 1054 aa16.26■□□□□ 0.19
GGA3-215ENST00000582821 COL9A3Q14050 684 aaPredicted RBP16.26■□□□□ 0.19
GGA3-215ENST00000582821 RNF207Q6ZRF8 634 aa16.26■□□□□ 0.19
GGA3-215ENST00000582821 FBXO11Q86XK2 927 aa16.26■□□□□ 0.19
GGA3-215ENST00000582821 ZNF654Q8IZM8 581 aa16.26■□□□□ 0.19
GGA3-215ENST00000582821 VAT1LQ9HCJ6 419 aa16.26■□□□□ 0.19
GGA3-215ENST00000582821 GPHNQ9NQX3 736 aaPredicted RBP16.26■□□□□ 0.19
GGA3-215ENST00000582821 ADD3Q9UEY8 706 aaKnown RBP16.26■□□□□ 0.19
GGA3-215ENST00000582821 FAM184BQ9ULE4 1060 aa16.26■□□□□ 0.19
GGA3-215ENST00000582821 ASTN1O14525 1302 aa16.25■□□□□ 0.19
GGA3-215ENST00000582821 ZBTB5O15062 677 aa16.25■□□□□ 0.19
GGA3-215ENST00000582821 DHX16O60231 1041 aaKnown RBP16.25■□□□□ 0.19
GGA3-215ENST00000582821 RARBP10826 455 aa16.25■□□□□ 0.19
GGA3-215ENST00000582821 HSPA4P34932 840 aa16.25■□□□□ 0.19
GGA3-215ENST00000582821 RPS6P62753 249 aaKnown RBP16.25■□□□□ 0.19
GGA3-215ENST00000582821 SLC35G1Q2M3R5 365 aa16.25■□□□□ 0.19
GGA3-215ENST00000582821 DHX32Q7L7V1 743 aaKnown RBP16.25■□□□□ 0.19
GGA3-215ENST00000582821 SGMS1Q86VZ5 419 aa16.25■□□□□ 0.19
GGA3-215ENST00000582821 AMNQ9BXJ7 453 aa16.25■□□□□ 0.19
GGA3-215ENST00000582821 MRPL11Q9Y3B7 192 aaKnown RBP16.25■□□□□ 0.19
GGA3-215ENST00000582821 PTPDC1A2A3K4 754 aa16.24■□□□□ 0.19
GGA3-215ENST00000582821 DUSP11O75319 330 aaKnown RBP16.24■□□□□ 0.19
GGA3-215ENST00000582821 HMGB1P09429 215 aaKnown RBP16.24■□□□□ 0.19
GGA3-215ENST00000582821 TRAF1Q13077 416 aa16.24■□□□□ 0.19
GGA3-215ENST00000582821 LRRC41Q15345 812 aa16.24■□□□□ 0.19
GGA3-215ENST00000582821 ADCK5Q3MIX3 580 aa16.24■□□□□ 0.19
GGA3-215ENST00000582821 USH1GQ495M9 461 aa16.24■□□□□ 0.19
GGA3-215ENST00000582821 ANO1Q5XXA6 986 aa16.24■□□□□ 0.19
GGA3-215ENST00000582821 MCF2L2Q86YR7 1114 aa16.24■□□□□ 0.19
GGA3-215ENST00000582821 DNERQ8NFT8 737 aa16.24■□□□□ 0.19
GGA3-215ENST00000582821 LZTS2Q9BRK4 669 aa16.24■□□□□ 0.19
GGA3-215ENST00000582821 NR2E3Q9Y5X4 410 aa16.24■□□□□ 0.19
GGA3-215ENST00000582821 CCDC69A6NI79 296 aa16.23■□□□□ 0.19
GGA3-215ENST00000582821 CYTH3O43739 400 aa16.23■□□□□ 0.19
GGA3-215ENST00000582821 CALM1P0DP23 149 aa16.23■□□□□ 0.19
GGA3-215ENST00000582821 CALM2P0DP24 149 aa16.23■□□□□ 0.19
GGA3-215ENST00000582821 CALM3P0DP25 149 aa16.23■□□□□ 0.19
GGA3-215ENST00000582821 KIF5BP33176 963 aa16.23■□□□□ 0.19
GGA3-215ENST00000582821 GNAQP50148 359 aa16.23■□□□□ 0.19
GGA3-215ENST00000582821 ALDH5A1P51649 535 aaPredicted RBP16.23■□□□□ 0.19
GGA3-215ENST00000582821 GHRHRQ02643 423 aa16.23■□□□□ 0.19
GGA3-215ENST00000582821 CCDC144BQ3MJ40 725 aa16.23■□□□□ 0.19
GGA3-215ENST00000582821 GJC2Q5T442 439 aaPredicted RBP16.23■□□□□ 0.19
GGA3-215ENST00000582821 SAMD3Q8N6K7 520 aa16.23■□□□□ 0.19
GGA3-215ENST00000582821 CTCFLQ8NI51 663 aaPredicted RBP16.23■□□□□ 0.19
GGA3-215ENST00000582821 NUP133Q8WUM0 1156 aa16.23■□□□□ 0.19
GGA3-215ENST00000582821 PURBQ96QR8 312 aaKnown RBP16.23■□□□□ 0.19
GGA3-215ENST00000582821 XPNPEP3Q9NQH7 507 aa16.23■□□□□ 0.19
GGA3-215ENST00000582821 MAP3K20Q9NYL2 800 aaKnown RBP16.23■□□□□ 0.19
GGA3-215ENST00000582821 ZHX1Q9UKY1 873 aaPredicted RBP16.23■□□□□ 0.19
GGA3-215ENST00000582821 PNMA6FA0A0J9YX94 578 aa16.22■□□□□ 0.19
GGA3-215ENST00000582821 KBTBD13C9JR72 458 aa16.22■□□□□ 0.19
GGA3-215ENST00000582821 EVI5O60447 810 aa16.22■□□□□ 0.19
GGA3-215ENST00000582821 PPP1R11O60927 126 aaPredicted RBP16.22■□□□□ 0.19
GGA3-215ENST00000582821 ADAMTS4O75173 837 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms