RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 ADGRF4Q8IZF3 695 aa21.9■■□□□ 1.1
LIMS2-218ENST00000582671 ARRDC4Q8NCT1 418 aa21.9■■□□□ 1.1
LIMS2-218ENST00000582671 SENP6Q9GZR1 1112 aaPredicted RBP21.9■■□□□ 1.1
LIMS2-218ENST00000582671 SLC27A2O14975 620 aa21.89■■□□□ 1.09
LIMS2-218ENST00000582671 ADCY6O43306 1168 aa21.89■■□□□ 1.09
LIMS2-218ENST00000582671 MYCNP04198 464 aaPredicted RBP21.89■■□□□ 1.09
LIMS2-218ENST00000582671 ACVR2BQ13705 512 aa21.89■■□□□ 1.09
LIMS2-218ENST00000582671 BAATQ14032 418 aaPredicted RBP21.89■■□□□ 1.09
LIMS2-218ENST00000582671 LRRC41Q15345 812 aa21.89■■□□□ 1.09
LIMS2-218ENST00000582671 CDC37Q16543 378 aaPredicted RBP21.89■■□□□ 1.09
LIMS2-218ENST00000582671 LRRC26Q2I0M4 334 aa21.89■■□□□ 1.09
LIMS2-218ENST00000582671 ANO2Q9NQ90 1003 aa21.89■■□□□ 1.09
LIMS2-218ENST00000582671 XPNPEP3Q9NQH7 507 aa21.89■■□□□ 1.09
LIMS2-218ENST00000582671 COLQQ9Y215 455 aaPredicted RBP21.89■■□□□ 1.09
LIMS2-218ENST00000582671 PGK1P00558 417 aa21.88■■□□□ 1.09
LIMS2-218ENST00000582671 NEFLP07196 543 aa21.88■■□□□ 1.09
LIMS2-218ENST00000582671 RARBP10826 455 aa21.88■■□□□ 1.09
LIMS2-218ENST00000582671 CREB3L3Q68CJ9 461 aa21.88■■□□□ 1.09
LIMS2-218ENST00000582671 IGDCC4Q8TDY8 1250 aa21.88■■□□□ 1.09
LIMS2-218ENST00000582671 ABHD16BQ9H3Z7 469 aa21.88■■□□□ 1.09
LIMS2-218ENST00000582671 JMJD4Q9H9V9 463 aa21.88■■□□□ 1.09
LIMS2-218ENST00000582671 VAT1LQ9HCJ6 419 aa21.88■■□□□ 1.09
LIMS2-218ENST00000582671 MAD2L2Q9UI95 211 aa21.88■■□□□ 1.09
LIMS2-218ENST00000582671 FAM184BQ9ULE4 1060 aa21.88■■□□□ 1.09
LIMS2-218ENST00000582671 PALM3A6NDB9 673 aaPredicted RBP21.87■■□□□ 1.09
LIMS2-218ENST00000582671 CDC45O75419 566 aa21.87■■□□□ 1.09
LIMS2-218ENST00000582671 USH1GQ495M9 461 aa21.87■■□□□ 1.09
LIMS2-218ENST00000582671 SLC30A10Q6XR72 485 aa21.87■■□□□ 1.09
LIMS2-218ENST00000582671 GPHNQ9NQX3 736 aaPredicted RBP21.87■■□□□ 1.09
LIMS2-218ENST00000582671 PNMA2Q9UL42 364 aa21.87■■□□□ 1.09
LIMS2-218ENST00000582671 ADAMTS4O75173 837 aa21.86■■□□□ 1.09
LIMS2-218ENST00000582671 ATN1P54259 1190 aaPredicted RBP21.86■■□□□ 1.09
LIMS2-218ENST00000582671 WTAPQ15007 396 aa21.86■■□□□ 1.09
LIMS2-218ENST00000582671 SLC35G1Q2M3R5 365 aa21.86■■□□□ 1.09
LIMS2-218ENST00000582671 QRICH1Q2TAL8 776 aa21.86■■□□□ 1.09
LIMS2-218ENST00000582671 CCDC144BQ3MJ40 725 aa21.86■■□□□ 1.09
LIMS2-218ENST00000582671 TMEM67Q5HYA8 995 aa21.86■■□□□ 1.09
LIMS2-218ENST00000582671 CHRDL2Q6WN34 429 aa21.86■■□□□ 1.09
LIMS2-218ENST00000582671 RNF207Q6ZRF8 634 aa21.86■■□□□ 1.09
LIMS2-218ENST00000582671 PCDH10Q9P2E7 1040 aa21.86■■□□□ 1.09
LIMS2-218ENST00000582671 SYNRGQ9UMZ2 1314 aa21.85■■□□□ 1.09
LIMS2-218ENST00000582671 ERICH2A1L162 156 aa21.85■■□□□ 1.09
LIMS2-218ENST00000582671 PTPDC1A2A3K4 754 aa21.85■■□□□ 1.09
LIMS2-218ENST00000582671 ASB14A6NK59 587 aa21.85■■□□□ 1.09
LIMS2-218ENST00000582671 KBTBD13C9JR72 458 aa21.85■■□□□ 1.09
LIMS2-218ENST00000582671 KLRF2D3W0D1 207 aa21.85■■□□□ 1.09
LIMS2-218ENST00000582671 CALML3P27482 149 aa21.85■■□□□ 1.09
LIMS2-218ENST00000582671 ADCYAP1R1P41586 468 aa21.85■■□□□ 1.09
LIMS2-218ENST00000582671 IRX5P78411 483 aaPredicted RBP21.85■■□□□ 1.09
LIMS2-218ENST00000582671 TROAPQ12815 778 aa21.85■■□□□ 1.09
LIMS2-218ENST00000582671 GRM4Q14833 912 aa21.85■■□□□ 1.09
LIMS2-218ENST00000582671 ZMYND8Q9ULU4 1186 aaPredicted RBP21.85■■□□□ 1.09
LIMS2-218ENST00000582671 DHX16O60231 1041 aaKnown RBP21.84■■□□□ 1.09
LIMS2-218ENST00000582671 ALDH5A1P51649 535 aaPredicted RBP21.84■■□□□ 1.09
LIMS2-218ENST00000582671 HABP4Q5JVS0 413 aaKnown RBP21.84■■□□□ 1.09
LIMS2-218ENST00000582671 MORC4Q8TE76 937 aa21.84■■□□□ 1.09
LIMS2-218ENST00000582671 TBC1D5Q92609 795 aa21.84■■□□□ 1.09
LIMS2-218ENST00000582671 FERMT2Q96AC1 680 aa21.84■■□□□ 1.09
LIMS2-218ENST00000582671 LY9Q9HBG7 655 aa21.84■■□□□ 1.09
LIMS2-218ENST00000582671 PHF24Q9UPV7 400 aa21.84■■□□□ 1.09
LIMS2-218ENST00000582671 KIAA1217Q5T5P2 1943 aa21.84■■□□□ 1.09
LIMS2-218ENST00000582671 LTBP2Q14767 1821 aa21.83■■□□□ 1.09
LIMS2-218ENST00000582671 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.83■■□□□ 1.09
LIMS2-218ENST00000582671 MYADML2A6NDP7 307 aa21.83■■□□□ 1.09
LIMS2-218ENST00000582671 PRC1O43663 620 aa21.83■■□□□ 1.09
LIMS2-218ENST00000582671 DUSP11O75319 330 aaKnown RBP21.83■■□□□ 1.09
LIMS2-218ENST00000582671 SYN1P17600 705 aa21.83■■□□□ 1.09
LIMS2-218ENST00000582671 RPS6P62753 249 aaKnown RBP21.83■■□□□ 1.09
LIMS2-218ENST00000582671 SART3Q15020 963 aaKnown RBP21.83■■□□□ 1.09
LIMS2-218ENST00000582671 SLC39A5Q6ZMH5 540 aa21.83■■□□□ 1.09
LIMS2-218ENST00000582671 EEPD1Q7L9B9 569 aa21.83■■□□□ 1.09
LIMS2-218ENST00000582671 RNF180Q86T96 592 aa21.83■■□□□ 1.09
LIMS2-218ENST00000582671 KLHDC9Q8NEP7 349 aa21.83■■□□□ 1.09
LIMS2-218ENST00000582671 MTMR8Q96EF0 704 aa21.83■■□□□ 1.09
LIMS2-218ENST00000582671 PRO3102Q9H379 93 aa21.83■■□□□ 1.09
LIMS2-218ENST00000582671 PDGFCQ9NRA1 345 aa21.83■■□□□ 1.09
LIMS2-218ENST00000582671 ABCB11O95342 1321 aa21.82■■□□□ 1.08
LIMS2-218ENST00000582671 PPP1R11O60927 126 aaPredicted RBP21.82■■□□□ 1.08
LIMS2-218ENST00000582671 PTGS1P23219 599 aa21.82■■□□□ 1.08
LIMS2-218ENST00000582671 TAPT1Q6NXT6 567 aa21.82■■□□□ 1.08
LIMS2-218ENST00000582671 CASC1Q6TDU7 716 aa21.82■■□□□ 1.08
LIMS2-218ENST00000582671 FBXO11Q86XK2 927 aa21.82■■□□□ 1.08
LIMS2-218ENST00000582671 FBXO16Q8IX29 292 aaPredicted RBP21.82■■□□□ 1.08
LIMS2-218ENST00000582671 SH2B2O14492 632 aaPredicted RBP21.81■■□□□ 1.08
LIMS2-218ENST00000582671 CYTH3O43739 400 aa21.81■■□□□ 1.08
LIMS2-218ENST00000582671 MCM5P33992 734 aa21.81■■□□□ 1.08
LIMS2-218ENST00000582671 RTP1P59025 263 aa21.81■■□□□ 1.08
LIMS2-218ENST00000582671 TMEM63BQ5T3F8 832 aa21.81■■□□□ 1.08
LIMS2-218ENST00000582671 CCSAPQ6IQ19 270 aaPredicted RBP21.81■■□□□ 1.08
LIMS2-218ENST00000582671 RGS22Q8NE09 1264 aa21.81■■□□□ 1.08
LIMS2-218ENST00000582671 MYL10Q9BUA6 226 aa21.81■■□□□ 1.08
LIMS2-218ENST00000582671 RBM27Q9P2N5 1060 aaKnown RBP21.81■■□□□ 1.08
LIMS2-218ENST00000582671 ADD3Q9UEY8 706 aaKnown RBP21.81■■□□□ 1.08
LIMS2-218ENST00000582671 CTAGE5O15320 804 aa21.8■■□□□ 1.08
LIMS2-218ENST00000582671 TNFAIP2Q03169 654 aa21.8■■□□□ 1.08
LIMS2-218ENST00000582671 SNX17Q15036 470 aa21.8■■□□□ 1.08
LIMS2-218ENST00000582671 CATIPQ7Z7H3 387 aa21.8■■□□□ 1.08
LIMS2-218ENST00000582671 RASEFQ8IZ41 740 aa21.8■■□□□ 1.08
LIMS2-218ENST00000582671 ZNF654Q8IZM8 581 aa21.8■■□□□ 1.08
LIMS2-218ENST00000582671 MTA3Q9BTC8 594 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms