RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 IL17AQ16552 155 aa25.64■■□□□ 1.7
CCDC47-204ENST00000582252 TRPM4Q8TD43 1214 aa25.64■■□□□ 1.7
CCDC47-204ENST00000582252 GLT8D2Q9H1C3 349 aa25.64■■□□□ 1.7
CCDC47-204ENST00000582252 JMJD4Q9H9V9 463 aa25.64■■□□□ 1.7
CCDC47-204ENST00000582252 ERCC5P28715 1186 aaPredicted RBP25.63■■□□□ 1.69
CCDC47-204ENST00000582252 FANCCQ00597 558 aa25.63■■□□□ 1.69
CCDC47-204ENST00000582252 DPYDQ12882 1025 aa25.63■■□□□ 1.69
CCDC47-204ENST00000582252 ABCB5Q2M3G0 1257 aa25.63■■□□□ 1.69
CCDC47-204ENST00000582252 KIAA1524Q8TCG1 905 aa25.63■■□□□ 1.69
CCDC47-204ENST00000582252 L3MBTL3Q96JM7 780 aaPredicted RBP25.63■■□□□ 1.69
CCDC47-204ENST00000582252 ADARB2Q9NS39 739 aaKnown RBP25.63■■□□□ 1.69
CCDC47-204ENST00000582252 IFNKQ9P0W0 207 aa25.63■■□□□ 1.69
CCDC47-204ENST00000582252 HERC5Q9UII4 1024 aaKnown RBP25.63■■□□□ 1.69
CCDC47-204ENST00000582252 HACL1Q9UJ83 578 aa25.63■■□□□ 1.69
CCDC47-204ENST00000582252 ZBTB5O15062 677 aa25.63■■□□□ 1.69
CCDC47-204ENST00000582252 CCNT1O60563 726 aaKnown RBP25.63■■□□□ 1.69
CCDC47-204ENST00000582252 OR52Z1P0C646 297 aa25.63■■□□□ 1.69
CCDC47-204ENST00000582252 EEF2P13639 858 aaKnown RBP25.63■■□□□ 1.69
CCDC47-204ENST00000582252 ICA1Q05084 483 aa25.63■■□□□ 1.69
CCDC47-204ENST00000582252 LETM2Q2VYF4 491 aa25.63■■□□□ 1.69
CCDC47-204ENST00000582252 ENOX1Q8TC92 643 aaKnown RBP25.63■■□□□ 1.69
CCDC47-204ENST00000582252 NRBP1Q9UHY1 535 aa25.63■■□□□ 1.69
CCDC47-204ENST00000582252 GTPBP6O43824 516 aaPredicted RBP25.62■■□□□ 1.69
CCDC47-204ENST00000582252 BMP6P22004 513 aa25.62■■□□□ 1.69
CCDC47-204ENST00000582252 APOBEC3FQ8IUX4 373 aaKnown RBP25.62■■□□□ 1.69
CCDC47-204ENST00000582252 MTMR8Q96EF0 704 aa25.62■■□□□ 1.69
CCDC47-204ENST00000582252 XPO4Q9C0E2 1151 aaKnown RBP25.62■■□□□ 1.69
CCDC47-204ENST00000582252 CCSER1Q9C0I3 900 aa25.62■■□□□ 1.69
CCDC47-204ENST00000582252 TMEM39BQ9GZU3 492 aa25.62■■□□□ 1.69
CCDC47-204ENST00000582252 RIC8AQ9NPQ8 531 aa25.62■■□□□ 1.69
CCDC47-204ENST00000582252 SPTLC3Q9NUV7 552 aa25.62■■□□□ 1.69
CCDC47-204ENST00000582252 SYNPO2Q9UMS6 1093 aa25.62■■□□□ 1.69
CCDC47-204ENST00000582252 SERPINC1P01008 464 aa25.61■■□□□ 1.69
CCDC47-204ENST00000582252 UBA7P41226 1012 aa25.61■■□□□ 1.69
CCDC47-204ENST00000582252 STAT6P42226 847 aa25.61■■□□□ 1.69
CCDC47-204ENST00000582252 SLC1A4P43007 532 aa25.61■■□□□ 1.69
CCDC47-204ENST00000582252 RASA3Q14644 834 aa25.61■■□□□ 1.69
CCDC47-204ENST00000582252 SLFN13Q68D06 897 aa25.61■■□□□ 1.69
CCDC47-204ENST00000582252 PDXDC2PQ6P474 469 aa25.61■■□□□ 1.69
CCDC47-204ENST00000582252 TBCKQ8TEA7 893 aa25.61■■□□□ 1.69
CCDC47-204ENST00000582252 COA7Q96BR5 231 aa25.61■■□□□ 1.69
CCDC47-204ENST00000582252 RMND1Q9NWS8 449 aa25.61■■□□□ 1.69
CCDC47-204ENST00000582252 GLTPD2A6NH11 291 aa25.6■■□□□ 1.69
CCDC47-204ENST00000582252 MRPL12P52815 198 aaKnown RBP25.6■■□□□ 1.69
CCDC47-204ENST00000582252 JAKMIP3Q5VZ66 844 aa25.6■■□□□ 1.69
CCDC47-204ENST00000582252 RASSF8Q8NHQ8 419 aa25.6■■□□□ 1.69
CCDC47-204ENST00000582252 CUL5Q93034 780 aa25.6■■□□□ 1.69
CCDC47-204ENST00000582252 TMEM60Q9H2L4 133 aa25.6■■□□□ 1.69
CCDC47-204ENST00000582252 CUEDC2Q9H467 287 aa25.6■■□□□ 1.69
CCDC47-204ENST00000582252 MAGEF1Q9HAY2 307 aa25.6■■□□□ 1.69
CCDC47-204ENST00000582252 DISC1Q9NRI5 854 aa25.6■■□□□ 1.69
CCDC47-204ENST00000582252 BIN2Q9UBW5 565 aaPredicted RBP25.6■■□□□ 1.69
CCDC47-204ENST00000582252 FAM196BA6NMK8 535 aa25.6■■□□□ 1.69
CCDC47-204ENST00000582252 MYL1P05976 194 aa25.6■■□□□ 1.69
CCDC47-204ENST00000582252 CCDC144BQ3MJ40 725 aa25.6■■□□□ 1.69
CCDC47-204ENST00000582252 KCTD1Q719H9 257 aa25.6■■□□□ 1.69
CCDC47-204ENST00000582252 GMCL1P1Q8NEA9 526 aa25.6■■□□□ 1.69
CCDC47-204ENST00000582252 NAP1L5Q96NT1 182 aaPredicted RBP25.6■■□□□ 1.69
CCDC47-204ENST00000582252 ASTN2O75129 1339 aaPredicted RBP25.59■■□□□ 1.69
CCDC47-204ENST00000582252 SEMA3FQ13275 785 aa25.59■■□□□ 1.69
CCDC47-204ENST00000582252 SEPT2Q15019 361 aa25.59■■□□□ 1.69
CCDC47-204ENST00000582252 RRAGBQ5VZM2 374 aa25.59■■□□□ 1.69
CCDC47-204ENST00000582252 TTBK2Q6IQ55 1244 aa25.59■■□□□ 1.69
CCDC47-204ENST00000582252 NAP1L4Q99733 375 aaKnown RBP25.59■■□□□ 1.69
CCDC47-204ENST00000582252 PYCARDQ9ULZ3 195 aa25.59■■□□□ 1.69
CCDC47-204ENST00000582252 UBASH3AP57075 661 aa25.58■■□□□ 1.69
CCDC47-204ENST00000582252 ANGEL2Q5VTE6 544 aaKnown RBP25.58■■□□□ 1.69
CCDC47-204ENST00000582252 LRRC8AQ8IWT6 810 aa25.58■■□□□ 1.69
CCDC47-204ENST00000582252 CCDC150Q8NCX0 1101 aa25.58■■□□□ 1.69
CCDC47-204ENST00000582252 HSD3B7Q9H2F3 369 aa25.58■■□□□ 1.69
CCDC47-204ENST00000582252 PGAP2Q9UHJ9 254 aa25.58■■□□□ 1.69
CCDC47-204ENST00000582252 NRDCO43847 1150 aa25.57■■□□□ 1.68
CCDC47-204ENST00000582252 TBC1D12O60347 775 aa25.57■■□□□ 1.68
CCDC47-204ENST00000582252 FILIP1Q7Z7B0 1213 aa25.57■■□□□ 1.68
CCDC47-204ENST00000582252 GMCL1Q96IK5 515 aa25.57■■□□□ 1.68
CCDC47-204ENST00000582252 DEFB129Q9H1M3 183 aa25.57■■□□□ 1.68
CCDC47-204ENST00000582252 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.57■■□□□ 1.68
CCDC47-204ENST00000582252 FANCLQ9NW38 375 aa25.57■■□□□ 1.68
CCDC47-204ENST00000582252 GGA3Q9NZ52 723 aa25.57■■□□□ 1.68
CCDC47-204ENST00000582252 PITPNM2Q9BZ72 1349 aa25.57■■□□□ 1.68
CCDC47-204ENST00000582252 WDR90Q96KV7 1748 aa25.57■■□□□ 1.68
CCDC47-204ENST00000582252 USP17L10C9JJH3 530 aa25.57■■□□□ 1.68
CCDC47-204ENST00000582252 RAD21O60216 631 aa25.57■■□□□ 1.68
CCDC47-204ENST00000582252 HIRAP54198 1017 aaPredicted RBP25.57■■□□□ 1.68
CCDC47-204ENST00000582252 DNTTIP2Q5QJE6 756 aaKnown RBP25.57■■□□□ 1.68
CCDC47-204ENST00000582252 CACTINQ8WUQ7 758 aaKnown RBP25.57■■□□□ 1.68
CCDC47-204ENST00000582252 GDF11O95390 407 aa25.56■■□□□ 1.68
CCDC47-204ENST00000582252 SLC16A2P36021 539 aa25.56■■□□□ 1.68
CCDC47-204ENST00000582252 TERF1P54274 439 aa25.56■■□□□ 1.68
CCDC47-204ENST00000582252 KARSQ15046 597 aaKnown RBP25.56■■□□□ 1.68
CCDC47-204ENST00000582252 NFE2L3Q9Y4A8 694 aa25.56■■□□□ 1.68
CCDC47-204ENST00000582252 DCAF8L1A6NGE4 600 aa25.55■■□□□ 1.68
CCDC47-204ENST00000582252 CDK11BP21127 795 aaKnown RBP25.55■■□□□ 1.68
CCDC47-204ENST00000582252 TMEM266Q2M3C6 531 aa25.55■■□□□ 1.68
CCDC47-204ENST00000582252 MCTP2Q6DN12 878 aa25.55■■□□□ 1.68
CCDC47-204ENST00000582252 TMC6Q7Z403 805 aa25.55■■□□□ 1.68
CCDC47-204ENST00000582252 TEPSINQ96N21 525 aa25.55■■□□□ 1.68
CCDC47-204ENST00000582252 RAB34Q9BZG1 259 aa25.55■■□□□ 1.68
CCDC47-204ENST00000582252 TMEM260Q9NX78 707 aa25.55■■□□□ 1.68
CCDC47-204ENST00000582252 PPP2R3BQ9Y5P8 575 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms