RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 CCDC144BQ3MJ40 725 aa26.25■■□□□ 1.79
CASC3-207ENST00000581849 MUM1L1Q5H9M0 696 aa26.25■■□□□ 1.79
CASC3-207ENST00000581849 CCSAPQ6IQ19 270 aaPredicted RBP26.25■■□□□ 1.79
CASC3-207ENST00000581849 NUP133Q8WUM0 1156 aa26.25■■□□□ 1.79
CASC3-207ENST00000581849 FRMPD2Q68DX3 1309 aaPredicted RBP26.24■■□□□ 1.79
CASC3-207ENST00000581849 WDR19Q8NEZ3 1342 aa26.24■■□□□ 1.79
CASC3-207ENST00000581849 GSPT1P15170 499 aaKnown RBP26.24■■□□□ 1.79
CASC3-207ENST00000581849 ACLYP53396 1101 aa26.24■■□□□ 1.79
CASC3-207ENST00000581849 GJA9P57773 515 aa26.24■■□□□ 1.79
CASC3-207ENST00000581849 SNAP25P60880 206 aa26.24■■□□□ 1.79
CASC3-207ENST00000581849 PCSK9Q8NBP7 692 aaKnown RBP26.24■■□□□ 1.79
CASC3-207ENST00000581849 CNNM2Q9H8M5 875 aa26.24■■□□□ 1.79
CASC3-207ENST00000581849 GPCPD1Q9NPB8 672 aa26.24■■□□□ 1.79
CASC3-207ENST00000581849 PDLIM7Q9NR12 457 aa26.24■■□□□ 1.79
CASC3-207ENST00000581849 LRRC37A2A6NM11 1700 aa26.23■■□□□ 1.79
CASC3-207ENST00000581849 KDM4AO75164 1064 aa26.23■■□□□ 1.79
CASC3-207ENST00000581849 KRT23Q9C075 422 aa26.23■■□□□ 1.79
CASC3-207ENST00000581849 TLE2Q04725 743 aa26.22■■□□□ 1.79
CASC3-207ENST00000581849 NSMFQ6X4W1 530 aa26.22■■□□□ 1.79
CASC3-207ENST00000581849 MORC4Q8TE76 937 aa26.22■■□□□ 1.79
CASC3-207ENST00000581849 TOX2Q96NM4 488 aa26.22■■□□□ 1.79
CASC3-207ENST00000581849 STARD7Q9NQZ5 370 aa26.22■■□□□ 1.79
CASC3-207ENST00000581849 ADD3Q9UEY8 706 aaKnown RBP26.22■■□□□ 1.79
CASC3-207ENST00000581849 LCTP09848 1927 aa26.22■■□□□ 1.79
CASC3-207ENST00000581849 ASTN1O14525 1302 aa26.21■■□□□ 1.79
CASC3-207ENST00000581849 ELP1O95163 1332 aa26.21■■□□□ 1.79
CASC3-207ENST00000581849 ADCY6O43306 1168 aa26.21■■□□□ 1.79
CASC3-207ENST00000581849 ANKRD33Q7Z3H0 272 aa26.21■■□□□ 1.79
CASC3-207ENST00000581849 PNMA1Q8ND90 353 aa26.21■■□□□ 1.79
CASC3-207ENST00000581849 RUFY2Q8WXA3 655 aa26.21■■□□□ 1.79
CASC3-207ENST00000581849 LRCH3Q96II8 777 aa26.21■■□□□ 1.79
CASC3-207ENST00000581849 ZSCAN10Q96SZ4 725 aaPredicted RBP26.21■■□□□ 1.79
CASC3-207ENST00000581849 MAF1Q9H063 256 aa26.21■■□□□ 1.79
CASC3-207ENST00000581849 B4E1Z4 1266 aa26.2■■□□□ 1.78
CASC3-207ENST00000581849 C6orf222P0C671 652 aaPredicted RBP26.2■■□□□ 1.78
CASC3-207ENST00000581849 KCNA10Q16322 511 aa26.2■■□□□ 1.78
CASC3-207ENST00000581849 GLT1D1Q96MS3 346 aa26.2■■□□□ 1.78
CASC3-207ENST00000581849 ZKSCAN3Q9BRR0 538 aa26.2■■□□□ 1.78
CASC3-207ENST00000581849 PRDM5Q9NQX1 630 aaPredicted RBP26.2■■□□□ 1.78
CASC3-207ENST00000581849 CLTBP09497 229 aa26.19■■□□□ 1.78
CASC3-207ENST00000581849 TNFAIP2Q03169 654 aa26.19■■□□□ 1.78
CASC3-207ENST00000581849 IL25Q9H293 177 aa26.19■■□□□ 1.78
CASC3-207ENST00000581849 KAT14Q9H8E8 782 aa26.19■■□□□ 1.78
CASC3-207ENST00000581849 VTA1Q9NP79 307 aa26.19■■□□□ 1.78
CASC3-207ENST00000581849 ZSWIM5Q9P217 1185 aa26.19■■□□□ 1.78
CASC3-207ENST00000581849 MROH7Q68CQ1 1323 aa26.18■■□□□ 1.78
CASC3-207ENST00000581849 MYADML2A6NDP7 307 aa26.18■■□□□ 1.78
CASC3-207ENST00000581849 KIAA0355O15063 1070 aa26.18■■□□□ 1.78
CASC3-207ENST00000581849 BAATQ14032 418 aaPredicted RBP26.18■■□□□ 1.78
CASC3-207ENST00000581849 ASPRV1Q53RT3 343 aa26.18■■□□□ 1.78
CASC3-207ENST00000581849 IQSEC1Q6DN90 963 aa26.18■■□□□ 1.78
CASC3-207ENST00000581849 ENAHQ8N8S7 591 aaPredicted RBP26.18■■□□□ 1.78
CASC3-207ENST00000581849 CLEC4DQ8WXI8 215 aa26.18■■□□□ 1.78
CASC3-207ENST00000581849 GNEQ9Y223 722 aaKnown RBP26.18■■□□□ 1.78
CASC3-207ENST00000581849 Q9Y3F1 56 aa26.18■■□□□ 1.78
CASC3-207ENST00000581849 TNKSO95271 1327 aa26.17■■□□□ 1.78
CASC3-207ENST00000581849 NFIBO00712 420 aa26.17■■□□□ 1.78
CASC3-207ENST00000581849 ASGR1P07306 291 aa26.17■■□□□ 1.78
CASC3-207ENST00000581849 UBAC1Q9BSL1 405 aa26.17■■□□□ 1.78
CASC3-207ENST00000581849 TRIM43BA6NCK2 446 aa26.16■■□□□ 1.78
CASC3-207ENST00000581849 CTAGE5O15320 804 aa26.16■■□□□ 1.78
CASC3-207ENST00000581849 CHMLP26374 656 aa26.16■■□□□ 1.78
CASC3-207ENST00000581849 ALDH5A1P51649 535 aaPredicted RBP26.16■■□□□ 1.78
CASC3-207ENST00000581849 GNASQ5JWF2 1037 aa26.16■■□□□ 1.78
CASC3-207ENST00000581849 SH3RF1Q7Z6J0 888 aa26.16■■□□□ 1.78
CASC3-207ENST00000581849 RGS22Q8NE09 1264 aa26.16■■□□□ 1.78
CASC3-207ENST00000581849 TRIM43Q96BQ3 446 aaPredicted RBP26.16■■□□□ 1.78
CASC3-207ENST00000581849 DCDC2CA8MYV0 355 aa26.15■■□□□ 1.78
CASC3-207ENST00000581849 PQBP1O60828 265 aaKnown RBP26.15■■□□□ 1.78
CASC3-207ENST00000581849 IRX6P78412 446 aaPredicted RBP26.15■■□□□ 1.78
CASC3-207ENST00000581849 TAPT1Q6NXT6 567 aa26.15■■□□□ 1.78
CASC3-207ENST00000581849 RNF207Q6ZRF8 634 aa26.15■■□□□ 1.78
CASC3-207ENST00000581849 TLK2Q86UE8 772 aa26.15■■□□□ 1.78
CASC3-207ENST00000581849 BADQ92934 168 aa26.15■■□□□ 1.78
CASC3-207ENST00000581849 MPHOSPH6Q99547 160 aaKnown RBP26.15■■□□□ 1.78
CASC3-207ENST00000581849 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.14■■□□□ 1.78
CASC3-207ENST00000581849 PTPDC1A2A3K4 754 aa26.14■■□□□ 1.78
CASC3-207ENST00000581849 CABYRO75952 493 aa26.14■■□□□ 1.78
CASC3-207ENST00000581849 GOLGA8HP0CJ92 632 aa26.14■■□□□ 1.78
CASC3-207ENST00000581849 CDK7P50613 346 aa26.14■■□□□ 1.78
CASC3-207ENST00000581849 DNERQ8NFT8 737 aa26.14■■□□□ 1.78
CASC3-207ENST00000581849 SEZ6LQ9BYH1 1024 aa26.14■■□□□ 1.78
CASC3-207ENST00000581849 U3KPZ7 1027 aaPredicted RBP26.14■■□□□ 1.78
CASC3-207ENST00000581849 A0A0U1RQG5 324 aaPredicted RBP26.13■■□□□ 1.77
CASC3-207ENST00000581849 SMPD1P17405 629 aa26.13■■□□□ 1.77
CASC3-207ENST00000581849 FAAP100Q0VG06 881 aa26.13■■□□□ 1.77
CASC3-207ENST00000581849 NOL8Q76FK4 1167 aaKnown RBP26.13■■□□□ 1.77
CASC3-207ENST00000581849 FBXO16Q8IX29 292 aaPredicted RBP26.13■■□□□ 1.77
CASC3-207ENST00000581849 AP5M1Q9H0R1 490 aa26.13■■□□□ 1.77
CASC3-207ENST00000581849 ZEB2O60315 1214 aa26.12■■□□□ 1.77
CASC3-207ENST00000581849 PARP1P09874 1014 aaKnown RBP26.12■■□□□ 1.77
CASC3-207ENST00000581849 RPS6P62753 249 aaKnown RBP26.12■■□□□ 1.77
CASC3-207ENST00000581849 TRDNQ13061 729 aa26.12■■□□□ 1.77
CASC3-207ENST00000581849 CDC37Q16543 378 aaPredicted RBP26.12■■□□□ 1.77
CASC3-207ENST00000581849 IFIT1BQ5T764 474 aaKnown RBP26.12■■□□□ 1.77
CASC3-207ENST00000581849 SLC30A10Q6XR72 485 aa26.12■■□□□ 1.77
CASC3-207ENST00000581849 PURBQ96QR8 312 aaKnown RBP26.12■■□□□ 1.77
CASC3-207ENST00000581849 UBA5Q9GZZ9 404 aa26.12■■□□□ 1.77
CASC3-207ENST00000581849 TMEM39AQ9NV64 488 aa26.12■■□□□ 1.77
CASC3-207ENST00000581849 ABCB11O95342 1321 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms