RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 TNKSO95271 1327 aa16.67■□□□□ 0.26
CSNK1D-219ENST00000581660 POTEB3A0JP26 581 aa16.66■□□□□ 0.26
CSNK1D-219ENST00000581660 PITPNM1O00562 1244 aa16.66■□□□□ 0.26
CSNK1D-219ENST00000581660 DYNC1LI2O43237 492 aaPredicted RBP16.66■□□□□ 0.26
CSNK1D-219ENST00000581660 RAD21O60216 631 aa16.66■□□□□ 0.26
CSNK1D-219ENST00000581660 BAIAP3O94812 1187 aa16.66■□□□□ 0.26
CSNK1D-219ENST00000581660 NDUFB10O96000 172 aa16.66■□□□□ 0.26
CSNK1D-219ENST00000581660 CYP2C9P11712 490 aa16.66■□□□□ 0.26
CSNK1D-219ENST00000581660 CNTN2Q02246 1040 aa16.66■□□□□ 0.26
CSNK1D-219ENST00000581660 POTEBQ6S5H4 581 aa16.66■□□□□ 0.26
CSNK1D-219ENST00000581660 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.66■□□□□ 0.26
CSNK1D-219ENST00000581660 RAVER2Q9HCJ3 691 aaKnown RBP16.66■□□□□ 0.26
CSNK1D-219ENST00000581660 PTPRSQ13332 1948 aa16.65■□□□□ 0.26
CSNK1D-219ENST00000581660 CYP2D7A0A087X1C5 515 aa16.65■□□□□ 0.26
CSNK1D-219ENST00000581660 ASB14A6NK59 587 aa16.65■□□□□ 0.26
CSNK1D-219ENST00000581660 DCXO43602 365 aa16.65■□□□□ 0.26
CSNK1D-219ENST00000581660 PTGS1P23219 599 aa16.65■□□□□ 0.26
CSNK1D-219ENST00000581660 SSTR3P32745 418 aaPredicted RBP16.65■□□□□ 0.26
CSNK1D-219ENST00000581660 IQSEC1Q6DN90 963 aa16.65■□□□□ 0.26
CSNK1D-219ENST00000581660 TET1Q8NFU7 2136 aa16.65■□□□□ 0.26
CSNK1D-219ENST00000581660 GDPD5Q8WTR4 605 aa16.65■□□□□ 0.26
CSNK1D-219ENST00000581660 ARMT1Q9H993 441 aa16.65■□□□□ 0.26
CSNK1D-219ENST00000581660 TRIOO75962 3097 aa16.64■□□□□ 0.25
CSNK1D-219ENST00000581660 SOWAHBA6NEL2 793 aa16.64■□□□□ 0.25
CSNK1D-219ENST00000581660 F5H6K3 240 aa16.64■□□□□ 0.25
CSNK1D-219ENST00000581660 PRKAB2O43741 272 aa16.64■□□□□ 0.25
CSNK1D-219ENST00000581660 BCAR3O75815 825 aa16.64■□□□□ 0.25
CSNK1D-219ENST00000581660 IL9P15248 144 aa16.64■□□□□ 0.25
CSNK1D-219ENST00000581660 KLRC3Q07444 240 aa16.64■□□□□ 0.25
CSNK1D-219ENST00000581660 PUS10Q3MIT2 529 aaKnown RBP16.64■□□□□ 0.25
CSNK1D-219ENST00000581660 NYAP2Q9P242 653 aa16.64■□□□□ 0.25
CSNK1D-219ENST00000581660 ZBED9Q6R2W3 1325 aa16.64■□□□□ 0.25
CSNK1D-219ENST00000581660 SCN10AQ9Y5Y9 1956 aa16.64■□□□□ 0.25
CSNK1D-219ENST00000581660 CFAP54Q96N23 3096 aa16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 LCHNA4D1U4 455 aa16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 GRXCR2A6NFK2 248 aa16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 USP17L12C9JPN9 530 aa16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 USP17L21D6R901 530 aa16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 IPO8O15397 1037 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 IQCF3P0C7M6 154 aa16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 KCNA5P22460 613 aa16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 SLC4A3P48751 1232 aa16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 PTCRAQ6ISU1 281 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 TAPT1Q6NXT6 567 aa16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 AMOTL1Q8IY63 956 aa16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 ACAD9Q9H845 621 aa16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 A1CFQ9NQ94 594 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 TNNQ9UQP3 1299 aa16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 CTDP1Q9Y5B0 961 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 ZNF536O15090 1300 aa16.63■□□□□ 0.25
CSNK1D-219ENST00000581660 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.62■□□□□ 0.25
CSNK1D-219ENST00000581660 KIFC2Q96AC6 838 aa16.62■□□□□ 0.25
CSNK1D-219ENST00000581660 SUGCTQ9HAC7 445 aa16.62■□□□□ 0.25
CSNK1D-219ENST00000581660 PDGFCQ9NRA1 345 aa16.62■□□□□ 0.25
CSNK1D-219ENST00000581660 POLR3EQ9NVU0 708 aa16.62■□□□□ 0.25
CSNK1D-219ENST00000581660 FEM1BQ9UK73 627 aa16.62■□□□□ 0.25
CSNK1D-219ENST00000581660 CACNA1HO95180 2353 aa16.62■□□□□ 0.25
CSNK1D-219ENST00000581660 MBD4O95243 580 aa16.61■□□□□ 0.25
CSNK1D-219ENST00000581660 ERVK-21P61565 698 aa16.61■□□□□ 0.25
CSNK1D-219ENST00000581660 PURAQ00577 322 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-219ENST00000581660 TMEM63BQ5T3F8 832 aa16.61■□□□□ 0.25
CSNK1D-219ENST00000581660 AACSQ86V21 672 aa16.61■□□□□ 0.25
CSNK1D-219ENST00000581660 NEK9Q8TD19 979 aa16.61■□□□□ 0.25
CSNK1D-219ENST00000581660 FTOQ9C0B1 505 aaKnown RBP eCLIP16.61■□□□□ 0.253e-10■■■■■ 39.9
CSNK1D-219ENST00000581660 VTA1Q9NP79 307 aa16.61■□□□□ 0.25
CSNK1D-219ENST00000581660 SYNPO2Q9UMS6 1093 aa16.61■□□□□ 0.25
CSNK1D-219ENST00000581660 SPTBN4Q9H254 2564 aa16.6■□□□□ 0.25
CSNK1D-219ENST00000581660 FDX1P10109 184 aa16.6■□□□□ 0.25
CSNK1D-219ENST00000581660 KCNJ6P48051 423 aa16.6■□□□□ 0.25
CSNK1D-219ENST00000581660 WDR5P61964 334 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-219ENST00000581660 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
CSNK1D-219ENST00000581660 FBXO16Q8IX29 292 aaPredicted RBP16.6■□□□□ 0.25
CSNK1D-219ENST00000581660 RETREG2Q8NC44 543 aa16.6■□□□□ 0.25
CSNK1D-219ENST00000581660 MORC4Q8TE76 937 aa16.6■□□□□ 0.25
CSNK1D-219ENST00000581660 TGS1Q96RS0 853 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-219ENST00000581660 HOMER2Q9NSB8 354 aa16.6■□□□□ 0.25
CSNK1D-219ENST00000581660 COG6Q9Y2V7 657 aa16.6■□□□□ 0.25
CSNK1D-219ENST00000581660 SIP14410 1827 aa16.6■□□□□ 0.25
CSNK1D-219ENST00000581660 GOLIM4O00461 696 aa16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 ST18O60284 1047 aa16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 ADD2P35612 726 aa16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 ZP2Q05996 745 aa16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 BFSP2Q13515 415 aa16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 LRRFIP1Q32MZ4 808 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 TKFCQ3LXA3 575 aa16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 NFRKBQ6P4R8 1299 aa16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 CTR9Q6PD62 1173 aa16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 HFE2Q6ZVN8 426 aa16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 DDRGK1Q96HY6 314 aa16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 MTG1Q9BT17 334 aaPredicted RBP16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 RNF146Q9NTX7 359 aa16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 PRKAG3Q9UGI9 489 aa16.59■□□□□ 0.25
CSNK1D-219ENST00000581660 IGKV6D-41A0A0C4DH26 115 aa16.58■□□□□ 0.24
CSNK1D-219ENST00000581660 C19orf67A6NJJ6 358 aa16.58■□□□□ 0.24
CSNK1D-219ENST00000581660 RASA1P20936 1047 aa16.58■□□□□ 0.24
CSNK1D-219ENST00000581660 CPT1AP50416 773 aa16.58■□□□□ 0.24
CSNK1D-219ENST00000581660 PTPN11Q06124 597 aaPredicted RBP16.58■□□□□ 0.24
CSNK1D-219ENST00000581660 ERC1Q8IUD2 1116 aa16.58■□□□□ 0.24
CSNK1D-219ENST00000581660 TMEM57Q8N5G2 664 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms