RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 NONOQ15233 471 aaKnown RBP eCLIP19.85■□□□□ 0.77
TMCO1-207ENST00000580248 IL17AQ16552 155 aa19.85■□□□□ 0.77
TMCO1-207ENST00000580248 MYRIPQ8NFW9 859 aa19.85■□□□□ 0.77
TMCO1-207ENST00000580248 PI4KBQ9UBF8 816 aa19.85■□□□□ 0.77
TMCO1-207ENST00000580248 MTMR7Q9Y216 660 aa19.85■□□□□ 0.77
TMCO1-207ENST00000580248 ASTN2O75129 1339 aaPredicted RBP19.84■□□□□ 0.77
TMCO1-207ENST00000580248 GREB1LQ9C091 1923 aaPredicted RBP19.84■□□□□ 0.77
TMCO1-207ENST00000580248 DYNC1I1O14576 645 aa19.84■□□□□ 0.77
TMCO1-207ENST00000580248 ADAMTS3O15072 1205 aa19.84■□□□□ 0.77
TMCO1-207ENST00000580248 ATP1A3P13637 1013 aa19.84■□□□□ 0.77
TMCO1-207ENST00000580248 AKR1B1P15121 316 aa19.84■□□□□ 0.77
TMCO1-207ENST00000580248 ZNF18P17022 549 aa19.84■□□□□ 0.77
TMCO1-207ENST00000580248 SFPQP23246 707 aaKnown RBP eCLIP19.84■□□□□ 0.77
TMCO1-207ENST00000580248 AFMP43652 599 aa19.84■□□□□ 0.77
TMCO1-207ENST00000580248 RMND1Q9NWS8 449 aa19.84■□□□□ 0.77
TMCO1-207ENST00000580248 NFE2L3Q9Y4A8 694 aa19.84■□□□□ 0.77
TMCO1-207ENST00000580248 IQCA1LA6NCM1 817 aa19.83■□□□□ 0.77
TMCO1-207ENST00000580248 USP17L5A8MUK1 530 aa19.83■□□□□ 0.77
TMCO1-207ENST00000580248 MYL1P05976 194 aa19.83■□□□□ 0.77
TMCO1-207ENST00000580248 INF2Q27J81 1249 aa19.83■□□□□ 0.77
TMCO1-207ENST00000580248 PPP1R18Q6NYC8 613 aa19.83■□□□□ 0.77
TMCO1-207ENST00000580248 PDXDC2PQ6P474 469 aa19.83■□□□□ 0.77
TMCO1-207ENST00000580248 VSTM4Q8IW00 320 aa19.83■□□□□ 0.77
TMCO1-207ENST00000580248 AK8Q96MA6 479 aa19.83■□□□□ 0.77
TMCO1-207ENST00000580248 CCSER1Q9C0I3 900 aa19.83■□□□□ 0.77
TMCO1-207ENST00000580248 CDK11BP21127 795 aaKnown RBP19.82■□□□□ 0.76
TMCO1-207ENST00000580248 SHMT1P34896 483 aa19.82■□□□□ 0.76
TMCO1-207ENST00000580248 ANGEL2Q5VTE6 544 aaKnown RBP19.82■□□□□ 0.76
TMCO1-207ENST00000580248 SPATA1Q5VX52 437 aa19.82■□□□□ 0.76
TMCO1-207ENST00000580248 USP50Q70EL3 339 aaPredicted RBP19.82■□□□□ 0.76
TMCO1-207ENST00000580248 CCDC112Q8NEF3 446 aa19.82■□□□□ 0.76
TMCO1-207ENST00000580248 RASGRP4Q8TDF6 673 aa19.82■□□□□ 0.76
TMCO1-207ENST00000580248 PIGSQ96S52 555 aa19.82■□□□□ 0.76
TMCO1-207ENST00000580248 EPHX2P34913 555 aa19.82■□□□□ 0.76
TMCO1-207ENST00000580248 GTF2F1P35269 517 aaKnown RBP eCLIP19.82■□□□□ 0.76
TMCO1-207ENST00000580248 RASA3Q14644 834 aa19.82■□□□□ 0.76
TMCO1-207ENST00000580248 ARID5BQ14865 1188 aa19.82■□□□□ 0.76
TMCO1-207ENST00000580248 TPD52L1Q16890 204 aaPredicted RBP19.82■□□□□ 0.76
TMCO1-207ENST00000580248 GPATCH4Q5T3I0 446 aaKnown RBP19.82■□□□□ 0.76
TMCO1-207ENST00000580248 APOBEC3FQ8IUX4 373 aaKnown RBP19.82■□□□□ 0.76
TMCO1-207ENST00000580248 CSRNP1Q96S65 589 aa19.82■□□□□ 0.76
TMCO1-207ENST00000580248 TMEM39BQ9GZU3 492 aa19.82■□□□□ 0.76
TMCO1-207ENST00000580248 CUEDC2Q9H467 287 aa19.82■□□□□ 0.76
TMCO1-207ENST00000580248 MAGEF1Q9HAY2 307 aa19.82■□□□□ 0.76
TMCO1-207ENST00000580248 WDR90Q96KV7 1748 aa19.81■□□□□ 0.76
TMCO1-207ENST00000580248 POTECB2RU33 542 aa19.81■□□□□ 0.76
TMCO1-207ENST00000580248 FMR1Q06787 632 aaKnown RBP eCLIP19.81■□□□□ 0.76
TMCO1-207ENST00000580248 NEK8Q86SG6 692 aa19.81■□□□□ 0.76
TMCO1-207ENST00000580248 PGAP2Q9UHJ9 254 aa19.81■□□□□ 0.76
TMCO1-207ENST00000580248 SCN4AP35499 1836 aa19.81■□□□□ 0.76
TMCO1-207ENST00000580248 STAT6P42226 847 aa19.8■□□□□ 0.76
TMCO1-207ENST00000580248 ZNF543Q08ER8 600 aa19.8■□□□□ 0.76
TMCO1-207ENST00000580248 CUL4BQ13620 913 aa19.8■□□□□ 0.76
TMCO1-207ENST00000580248 ARMCX5Q6P1M9 558 aa19.8■□□□□ 0.76
TMCO1-207ENST00000580248 HOMER1Q86YM7 354 aa19.8■□□□□ 0.76
TMCO1-207ENST00000580248 DEFB129Q9H1M3 183 aa19.8■□□□□ 0.76
TMCO1-207ENST00000580248 DISC1Q9NRI5 854 aa19.8■□□□□ 0.76
TMCO1-207ENST00000580248 GGA3Q9NZ52 723 aa19.8■□□□□ 0.76
TMCO1-207ENST00000580248 PAXBP1Q9Y5B6 917 aa19.8■□□□□ 0.76
TMCO1-207ENST00000580248 PITPNM2Q9BZ72 1349 aa19.8■□□□□ 0.76
TMCO1-207ENST00000580248 KIF2AO00139 706 aaPredicted RBP19.79■□□□□ 0.76
TMCO1-207ENST00000580248 OR52Z1P0C646 297 aa19.79■□□□□ 0.76
TMCO1-207ENST00000580248 REXO1Q8N1G1 1221 aaKnown RBP19.79■□□□□ 0.76
TMCO1-207ENST00000580248 TAF1DQ9H5J8 278 aaPredicted RBP19.79■□□□□ 0.76
TMCO1-207ENST00000580248 VAT1LQ9HCJ6 419 aa19.79■□□□□ 0.76
TMCO1-207ENST00000580248 SCAF8Q9UPN6 1271 aaKnown RBP19.79■□□□□ 0.76
TMCO1-207ENST00000580248 SYNRGQ9UMZ2 1314 aa19.79■□□□□ 0.76
TMCO1-207ENST00000580248 PNMA6FA0A0J9YX94 578 aa19.79■□□□□ 0.76
TMCO1-207ENST00000580248 CCP110O43303 1012 aa19.79■□□□□ 0.76
TMCO1-207ENST00000580248 TUBB4AP04350 444 aa19.79■□□□□ 0.76
TMCO1-207ENST00000580248 UBA7P41226 1012 aa19.79■□□□□ 0.76
TMCO1-207ENST00000580248 RRAGBQ5VZM2 374 aa19.79■□□□□ 0.76
TMCO1-207ENST00000580248 CTAGE1Q96RT6 745 aa19.79■□□□□ 0.76
TMCO1-207ENST00000580248 UBA5Q9GZZ9 404 aa19.79■□□□□ 0.76
TMCO1-207ENST00000580248 PPP1R3GB7ZBB8 358 aa19.78■□□□□ 0.76
TMCO1-207ENST00000580248 TNNT1P13805 278 aa19.78■□□□□ 0.76
TMCO1-207ENST00000580248 ADCY7P51828 1080 aa19.78■□□□□ 0.76
TMCO1-207ENST00000580248 ZNF658Q5TYW1 1059 aaPredicted RBP19.78■□□□□ 0.76
TMCO1-207ENST00000580248 PNMA8AQ86V59 439 aaPredicted RBP19.78■□□□□ 0.76
TMCO1-207ENST00000580248 CCAR2Q8N163 923 aaKnown RBP19.78■□□□□ 0.76
TMCO1-207ENST00000580248 LRRC47Q8N1G4 583 aaKnown RBP19.78■□□□□ 0.76
TMCO1-207ENST00000580248 ZC3H15Q8WU90 426 aaKnown RBP19.78■□□□□ 0.76
TMCO1-207ENST00000580248 TEPSINQ96N21 525 aa19.78■□□□□ 0.76
TMCO1-207ENST00000580248 TRIM34Q9BYJ4 488 aa19.78■□□□□ 0.76
TMCO1-207ENST00000580248 GTPBP4Q9BZE4 634 aaKnown RBP19.78■□□□□ 0.76
TMCO1-207ENST00000580248 TMEM60Q9H2L4 133 aa19.78■□□□□ 0.76
TMCO1-207ENST00000580248 CPVLQ9H3G5 476 aa19.78■□□□□ 0.76
TMCO1-207ENST00000580248 HERC5Q9UII4 1024 aaKnown RBP19.78■□□□□ 0.76
TMCO1-207ENST00000580248 SIPA1L1O43166 1804 aa19.78■□□□□ 0.76
TMCO1-207ENST00000580248 FRMPD2Q68DX3 1309 aaPredicted RBP19.77■□□□□ 0.76
TMCO1-207ENST00000580248 RASGRP2Q7LDG7 609 aa19.77■□□□□ 0.76
TMCO1-207ENST00000580248 MKL1Q969V6 931 aa19.77■□□□□ 0.76
TMCO1-207ENST00000580248 DCPSQ96C86 337 aaKnown RBP19.77■□□□□ 0.76
TMCO1-207ENST00000580248 DNAJC18Q9H819 358 aa19.77■□□□□ 0.76
TMCO1-207ENST00000580248 NYAP2Q9P242 653 aa19.77■□□□□ 0.76
TMCO1-207ENST00000580248 PPP2R3BQ9Y5P8 575 aa19.77■□□□□ 0.76
TMCO1-207ENST00000580248 MYH4Q9Y623 1939 aa19.77■□□□□ 0.76
TMCO1-207ENST00000580248 TBC1D12O60347 775 aa19.76■□□□□ 0.75
TMCO1-207ENST00000580248 CCNT1O60563 726 aaKnown RBP19.76■□□□□ 0.75
TMCO1-207ENST00000580248 KCNB1Q14721 858 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms