RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 CPXCR1Q8N123 301 aa16.67■□□□□ 0.26
CSNK1D-211ENST00000579316 TRMT13Q9NUP7 481 aaKnown RBP16.67■□□□□ 0.26
CSNK1D-211ENST00000579316 TANC1Q9C0D5 1861 aa16.67■□□□□ 0.26
CSNK1D-211ENST00000579316 TNKSO95271 1327 aa16.67■□□□□ 0.26
CSNK1D-211ENST00000579316 POTEB3A0JP26 581 aa16.66■□□□□ 0.26
CSNK1D-211ENST00000579316 PITPNM1O00562 1244 aa16.66■□□□□ 0.26
CSNK1D-211ENST00000579316 DYNC1LI2O43237 492 aaPredicted RBP16.66■□□□□ 0.26
CSNK1D-211ENST00000579316 RAD21O60216 631 aa16.66■□□□□ 0.26
CSNK1D-211ENST00000579316 BAIAP3O94812 1187 aa16.66■□□□□ 0.26
CSNK1D-211ENST00000579316 NDUFB10O96000 172 aa16.66■□□□□ 0.26
CSNK1D-211ENST00000579316 CYP2C9P11712 490 aa16.66■□□□□ 0.26
CSNK1D-211ENST00000579316 CNTN2Q02246 1040 aa16.66■□□□□ 0.26
CSNK1D-211ENST00000579316 POTEBQ6S5H4 581 aa16.66■□□□□ 0.26
CSNK1D-211ENST00000579316 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.66■□□□□ 0.26
CSNK1D-211ENST00000579316 RAVER2Q9HCJ3 691 aaKnown RBP16.66■□□□□ 0.26
CSNK1D-211ENST00000579316 PTPRSQ13332 1948 aa16.65■□□□□ 0.26
CSNK1D-211ENST00000579316 CYP2D7A0A087X1C5 515 aa16.65■□□□□ 0.26
CSNK1D-211ENST00000579316 ASB14A6NK59 587 aa16.65■□□□□ 0.26
CSNK1D-211ENST00000579316 DCXO43602 365 aa16.65■□□□□ 0.26
CSNK1D-211ENST00000579316 PTGS1P23219 599 aa16.65■□□□□ 0.26
CSNK1D-211ENST00000579316 SSTR3P32745 418 aaPredicted RBP16.65■□□□□ 0.26
CSNK1D-211ENST00000579316 IQSEC1Q6DN90 963 aa16.65■□□□□ 0.26
CSNK1D-211ENST00000579316 TET1Q8NFU7 2136 aa16.65■□□□□ 0.26
CSNK1D-211ENST00000579316 GDPD5Q8WTR4 605 aa16.65■□□□□ 0.26
CSNK1D-211ENST00000579316 ARMT1Q9H993 441 aa16.65■□□□□ 0.26
CSNK1D-211ENST00000579316 TRIOO75962 3097 aa16.64■□□□□ 0.25
CSNK1D-211ENST00000579316 SOWAHBA6NEL2 793 aa16.64■□□□□ 0.25
CSNK1D-211ENST00000579316 F5H6K3 240 aa16.64■□□□□ 0.25
CSNK1D-211ENST00000579316 PRKAB2O43741 272 aa16.64■□□□□ 0.25
CSNK1D-211ENST00000579316 BCAR3O75815 825 aa16.64■□□□□ 0.25
CSNK1D-211ENST00000579316 IL9P15248 144 aa16.64■□□□□ 0.25
CSNK1D-211ENST00000579316 KLRC3Q07444 240 aa16.64■□□□□ 0.25
CSNK1D-211ENST00000579316 PUS10Q3MIT2 529 aaKnown RBP16.64■□□□□ 0.25
CSNK1D-211ENST00000579316 NYAP2Q9P242 653 aa16.64■□□□□ 0.25
CSNK1D-211ENST00000579316 ZBED9Q6R2W3 1325 aa16.64■□□□□ 0.25
CSNK1D-211ENST00000579316 SCN10AQ9Y5Y9 1956 aa16.64■□□□□ 0.25
CSNK1D-211ENST00000579316 CFAP54Q96N23 3096 aa16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 LCHNA4D1U4 455 aa16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 GRXCR2A6NFK2 248 aa16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 USP17L12C9JPN9 530 aa16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 USP17L21D6R901 530 aa16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 IPO8O15397 1037 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 IQCF3P0C7M6 154 aa16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 KCNA5P22460 613 aa16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 SLC4A3P48751 1232 aa16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 PTCRAQ6ISU1 281 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 TAPT1Q6NXT6 567 aa16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 AMOTL1Q8IY63 956 aa16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 ACAD9Q9H845 621 aa16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 A1CFQ9NQ94 594 aaKnown RBP16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 TNNQ9UQP3 1299 aa16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 CTDP1Q9Y5B0 961 aaPredicted RBP16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 ZNF536O15090 1300 aa16.63■□□□□ 0.25
CSNK1D-211ENST00000579316 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.62■□□□□ 0.25
CSNK1D-211ENST00000579316 KIFC2Q96AC6 838 aa16.62■□□□□ 0.25
CSNK1D-211ENST00000579316 SUGCTQ9HAC7 445 aa16.62■□□□□ 0.25
CSNK1D-211ENST00000579316 PDGFCQ9NRA1 345 aa16.62■□□□□ 0.25
CSNK1D-211ENST00000579316 POLR3EQ9NVU0 708 aa16.62■□□□□ 0.25
CSNK1D-211ENST00000579316 FEM1BQ9UK73 627 aa16.62■□□□□ 0.25
CSNK1D-211ENST00000579316 CACNA1HO95180 2353 aa16.62■□□□□ 0.25
CSNK1D-211ENST00000579316 MBD4O95243 580 aa16.61■□□□□ 0.25
CSNK1D-211ENST00000579316 ERVK-21P61565 698 aa16.61■□□□□ 0.25
CSNK1D-211ENST00000579316 PURAQ00577 322 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-211ENST00000579316 TMEM63BQ5T3F8 832 aa16.61■□□□□ 0.25
CSNK1D-211ENST00000579316 AACSQ86V21 672 aa16.61■□□□□ 0.25
CSNK1D-211ENST00000579316 NEK9Q8TD19 979 aa16.61■□□□□ 0.25
CSNK1D-211ENST00000579316 FTOQ9C0B1 505 aaKnown RBP eCLIP16.61■□□□□ 0.253e-10■■■■■ 39.9
CSNK1D-211ENST00000579316 VTA1Q9NP79 307 aa16.61■□□□□ 0.25
CSNK1D-211ENST00000579316 SYNPO2Q9UMS6 1093 aa16.61■□□□□ 0.25
CSNK1D-211ENST00000579316 SPTBN4Q9H254 2564 aa16.6■□□□□ 0.25
CSNK1D-211ENST00000579316 FDX1P10109 184 aa16.6■□□□□ 0.25
CSNK1D-211ENST00000579316 KCNJ6P48051 423 aa16.6■□□□□ 0.25
CSNK1D-211ENST00000579316 WDR5P61964 334 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-211ENST00000579316 DUSP28Q4G0W2 176 aa16.6■□□□□ 0.25
CSNK1D-211ENST00000579316 FBXO16Q8IX29 292 aaPredicted RBP16.6■□□□□ 0.25
CSNK1D-211ENST00000579316 RETREG2Q8NC44 543 aa16.6■□□□□ 0.25
CSNK1D-211ENST00000579316 MORC4Q8TE76 937 aa16.6■□□□□ 0.25
CSNK1D-211ENST00000579316 TGS1Q96RS0 853 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-211ENST00000579316 HOMER2Q9NSB8 354 aa16.6■□□□□ 0.25
CSNK1D-211ENST00000579316 COG6Q9Y2V7 657 aa16.6■□□□□ 0.25
CSNK1D-211ENST00000579316 SIP14410 1827 aa16.6■□□□□ 0.25
CSNK1D-211ENST00000579316 GOLIM4O00461 696 aa16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 ST18O60284 1047 aa16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 ADD2P35612 726 aa16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 ZP2Q05996 745 aa16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 BFSP2Q13515 415 aa16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 LRRFIP1Q32MZ4 808 aaKnown RBP16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 TKFCQ3LXA3 575 aa16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 NFRKBQ6P4R8 1299 aa16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 CTR9Q6PD62 1173 aa16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 HFE2Q6ZVN8 426 aa16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 RPAP2Q8IXW5 612 aaPredicted RBP16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 DDRGK1Q96HY6 314 aa16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 MTG1Q9BT17 334 aaPredicted RBP16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 RNF146Q9NTX7 359 aa16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 PRKAG3Q9UGI9 489 aa16.59■□□□□ 0.25
CSNK1D-211ENST00000579316 IGKV6D-41A0A0C4DH26 115 aa16.58■□□□□ 0.24
CSNK1D-211ENST00000579316 C19orf67A6NJJ6 358 aa16.58■□□□□ 0.24
CSNK1D-211ENST00000579316 RASA1P20936 1047 aa16.58■□□□□ 0.24
CSNK1D-211ENST00000579316 CPT1AP50416 773 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms