RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 CDKL5O76039 1030 aa18■□□□□ 0.47
SLC6A4-205ENST00000579221 CAP1Q01518 475 aa18■□□□□ 0.47
SLC6A4-205ENST00000579221 SSRP1Q08945 709 aaKnown RBP18■□□□□ 0.47
SLC6A4-205ENST00000579221 NTRK3Q16288 839 aa18■□□□□ 0.47
SLC6A4-205ENST00000579221 PKN2Q16513 984 aaKnown RBP18■□□□□ 0.47
SLC6A4-205ENST00000579221 SOCS4Q8WXH5 440 aa18■□□□□ 0.47
SLC6A4-205ENST00000579221 DDX11Q96FC9 970 aa18■□□□□ 0.47
SLC6A4-205ENST00000579221 SH2B1Q9NRF2 756 aaPredicted RBP18■□□□□ 0.47
SLC6A4-205ENST00000579221 GJD2Q9UKL4 321 aa18■□□□□ 0.47
SLC6A4-205ENST00000579221 PCDHA1Q9Y5I3 950 aa18■□□□□ 0.47
SLC6A4-205ENST00000579221 A0A0G2JMZ2 1700 aa18■□□□□ 0.47
SLC6A4-205ENST00000579221 CNTNAP5Q8WYK1 1306 aa17.99■□□□□ 0.47
SLC6A4-205ENST00000579221 MUM1L1Q5H9M0 696 aa17.99■□□□□ 0.47
SLC6A4-205ENST00000579221 MORN1Q5T089 497 aa17.99■□□□□ 0.47
SLC6A4-205ENST00000579221 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.99■□□□□ 0.47
SLC6A4-205ENST00000579221 DPP9Q86TI2 863 aa17.99■□□□□ 0.47
SLC6A4-205ENST00000579221 MCF2L2Q86YR7 1114 aa17.99■□□□□ 0.47
SLC6A4-205ENST00000579221 TRIM22Q8IYM9 498 aa17.99■□□□□ 0.47
SLC6A4-205ENST00000579221 ANKRD35Q8N283 1001 aa17.99■□□□□ 0.47
SLC6A4-205ENST00000579221 NECAB1Q8N987 351 aa17.99■□□□□ 0.47
SLC6A4-205ENST00000579221 MAF1Q9H063 256 aa17.99■□□□□ 0.47
SLC6A4-205ENST00000579221 SLC5A4Q9NY91 659 aa17.99■□□□□ 0.47
SLC6A4-205ENST00000579221 GABRQQ9UN88 632 aa17.99■□□□□ 0.47
SLC6A4-205ENST00000579221 hCG_1642624A0A1W2PR95 340 aa17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 PPP1R11O60927 126 aaPredicted RBP17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 LARGE1O95461 756 aa17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 RGS2P41220 211 aa17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 FLT3LGP49771 235 aa17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 PRKCZQ05513 592 aa17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 MAP2K5Q13163 448 aa17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 GRB14Q14449 540 aa17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 RGS22Q8NE09 1264 aa17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 CLEC4DQ8WXI8 215 aa17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 PHKBQ93100 1093 aa17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 GTF3C6Q969F1 213 aa17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 SLC26A6Q9BXS9 759 aa17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 RNF26Q9BY78 433 aaPredicted RBP17.98■□□□□ 0.47
SLC6A4-205ENST00000579221 TAL1P17542 331 aaPredicted RBP17.97■□□□□ 0.47
SLC6A4-205ENST00000579221 ADORA2AP29274 412 aa17.97■□□□□ 0.47
SLC6A4-205ENST00000579221 IRF5Q13568 498 aa17.97■□□□□ 0.47
SLC6A4-205ENST00000579221 NSMFQ6X4W1 530 aa17.97■□□□□ 0.47
SLC6A4-205ENST00000579221 SAMD3Q8N6K7 520 aa17.97■□□□□ 0.47
SLC6A4-205ENST00000579221 RAET1EQ8TD07 263 aa17.97■□□□□ 0.47
SLC6A4-205ENST00000579221 USP6NLQ92738 828 aa17.97■□□□□ 0.47
SLC6A4-205ENST00000579221 PTPN22Q9Y2R2 807 aa17.97■□□□□ 0.47
SLC6A4-205ENST00000579221 PFASO15067 1338 aa17.97■□□□□ 0.47
SLC6A4-205ENST00000579221 hCG_1984214I3L0E3 225 aa17.96■□□□□ 0.47
SLC6A4-205ENST00000579221 XRCC5P13010 732 aaKnown RBP17.96■□□□□ 0.47
SLC6A4-205ENST00000579221 CYP2B6P20813 491 aa17.96■□□□□ 0.47
SLC6A4-205ENST00000579221 PFKFB3Q16875 520 aaPredicted RBP17.96■□□□□ 0.47
SLC6A4-205ENST00000579221 HEATR3Q7Z4Q2 680 aa17.96■□□□□ 0.47
SLC6A4-205ENST00000579221 ZNF713Q8N859 430 aaPredicted RBP17.96■□□□□ 0.47
SLC6A4-205ENST00000579221 A1CFQ9NQ94 594 aaKnown RBP17.96■□□□□ 0.47
SLC6A4-205ENST00000579221 COL11A1P12107 1806 aaPredicted RBP17.95■□□□□ 0.46
SLC6A4-205ENST00000579221 PTPDC1A2A3K4 754 aa17.95■□□□□ 0.46
SLC6A4-205ENST00000579221 NFIBO00712 420 aa17.95■□□□□ 0.46
SLC6A4-205ENST00000579221 SCG2P13521 617 aa17.95■□□□□ 0.46
SLC6A4-205ENST00000579221 BAATQ14032 418 aaPredicted RBP17.95■□□□□ 0.46
SLC6A4-205ENST00000579221 FBXO46Q6PJ61 603 aaPredicted RBP17.95■□□□□ 0.46
SLC6A4-205ENST00000579221 RNF207Q6ZRF8 634 aa17.95■□□□□ 0.46
SLC6A4-205ENST00000579221 CCDC83Q8IWF9 413 aa17.95■□□□□ 0.46
SLC6A4-205ENST00000579221 TRMT44Q8IYL2 757 aaKnown RBP17.95■□□□□ 0.46
SLC6A4-205ENST00000579221 MAP3K20Q9NYL2 800 aaKnown RBP17.95■□□□□ 0.46
SLC6A4-205ENST00000579221 CYP39A1Q9NYL5 469 aa17.95■□□□□ 0.46
SLC6A4-205ENST00000579221 DIS3Q9Y2L1 958 aaKnown RBP17.95■□□□□ 0.46
SLC6A4-205ENST00000579221 POTEB2H3BUK9 544 aa17.94■□□□□ 0.46
SLC6A4-205ENST00000579221 COBLO75128 1261 aa17.94■□□□□ 0.46
SLC6A4-205ENST00000579221 PPFIA3O75145 1194 aa17.94■□□□□ 0.46
SLC6A4-205ENST00000579221 CD2BP2O95400 341 aaKnown RBP17.94■□□□□ 0.46
SLC6A4-205ENST00000579221 DEXIO95424 95 aa17.94■□□□□ 0.46
SLC6A4-205ENST00000579221 PGK2P07205 417 aa17.94■□□□□ 0.46
SLC6A4-205ENST00000579221 HOXC6P09630 235 aa17.94■□□□□ 0.46
SLC6A4-205ENST00000579221 PKN1Q16512 942 aa17.94■□□□□ 0.46
SLC6A4-205ENST00000579221 TMX3Q96JJ7 454 aa17.94■□□□□ 0.46
SLC6A4-205ENST00000579221 APBA2Q99767 749 aa17.94■□□□□ 0.46
SLC6A4-205ENST00000579221 LLPHQ9BRT6 129 aaKnown RBP17.94■□□□□ 0.46
SLC6A4-205ENST00000579221 BARHL2Q9NY43 387 aa17.94■□□□□ 0.46
SLC6A4-205ENST00000579221 CASP8AP2Q9UKL3 1982 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 DNAJC25-GNG10A0A024R161 153 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 ADCY3O60266 1144 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 CTDNEP1O95476 244 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 CFBP00751 764 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 NAPAP54920 295 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 ZNF792Q3KQV3 632 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 WWC2Q6AWC2 1192 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 NPLOC4Q8TAT6 608 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 PXYLP1Q8TE99 480 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 CCDC12Q8WUD4 166 aaPredicted RBP17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 WASF1Q92558 559 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 TBC1D5Q92609 795 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 GPKOWQ92917 476 aaPredicted RBP eCLIP17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 CUL5Q93034 780 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 PSTPIP2Q9H939 334 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 ORC3Q9UBD5 711 aaPredicted RBP17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 PTCH2Q9Y6C5 1203 aa17.93■□□□□ 0.46
SLC6A4-205ENST00000579221 GCOM1H8Y6P7 765 aaPredicted RBP17.92■□□□□ 0.46
SLC6A4-205ENST00000579221 STXBP3O00186 592 aa17.92■□□□□ 0.46
SLC6A4-205ENST00000579221 POLR2MP0CAP2 368 aa17.92■□□□□ 0.46
SLC6A4-205ENST00000579221 CALML3P27482 149 aa17.92■□□□□ 0.46
SLC6A4-205ENST00000579221 RPS6P62753 249 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms