RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 DNAI1Q9UI46 699 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 MAD2L2Q9UI95 211 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 ZNF646O15015 1829 aaPredicted RBP11.3□□□□□ -0.6
RTTN-202ENST00000578780 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 PSDA5PKW4 1024 aaPredicted RBP11.3□□□□□ -0.6
RTTN-202ENST00000578780 ECM2O94769 699 aaPredicted RBP11.3□□□□□ -0.6
RTTN-202ENST00000578780 TOP1P11387 765 aaKnown RBP11.3□□□□□ -0.6
RTTN-202ENST00000578780 AKR1B1P15121 316 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 CCNHP51946 323 aaPredicted RBP11.3□□□□□ -0.6
RTTN-202ENST00000578780 NR5A1Q13285 461 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 DALRD3Q5D0E6 543 aaKnown RBP11.3□□□□□ -0.6
RTTN-202ENST00000578780 RBM43Q6ZSC3 357 aaKnown RBP11.3□□□□□ -0.6
RTTN-202ENST00000578780 FAM210AQ96ND0 272 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 TDRD3Q9H7E2 651 aaKnown RBP11.3□□□□□ -0.6
RTTN-202ENST00000578780 FAM198AQ9UFP1 575 aa11.3□□□□□ -0.6
RTTN-202ENST00000578780 PHLPP2Q6ZVD8 1323 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 MYO3BQ8WXR4 1341 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 PSMD14O00487 310 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 RTN2O75298 545 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 VIL1P09327 827 aaKnown RBP11.29□□□□□ -0.6
RTTN-202ENST00000578780 SCG2P13521 617 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 SHMT1P34896 483 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 SLC39A14Q15043 492 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 IQCB1Q15051 598 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 ADALQ6DHV7 355 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 FMNL3Q8IVF7 1028 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 ZSCAN29Q8IWY8 852 aaPredicted RBP11.29□□□□□ -0.6
RTTN-202ENST00000578780 PRPF38AQ8NAV1 312 aaKnown RBP11.29□□□□□ -0.6
RTTN-202ENST00000578780 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 ZNF483Q8TF39 744 aaPredicted RBP11.29□□□□□ -0.6
RTTN-202ENST00000578780 N4BP2L2Q92802 583 aaPredicted RBP11.29□□□□□ -0.6
RTTN-202ENST00000578780 PRMT6Q96LA8 375 aaPredicted RBP11.29□□□□□ -0.6
RTTN-202ENST00000578780 CLIC6Q96NY7 704 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 PHF20Q9BVI0 1012 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 TNMDQ9H2S6 317 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 DHX36Q9H2U1 1008 aaKnown RBP11.29□□□□□ -0.6
RTTN-202ENST00000578780 PALM3A6NDB9 673 aaPredicted RBP11.29□□□□□ -0.6
RTTN-202ENST00000578780 CTAGE5O15320 804 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 URI1O94763 535 aaPredicted RBP11.29□□□□□ -0.6
RTTN-202ENST00000578780 NOVP48745 357 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 PFKFB3Q16875 520 aaPredicted RBP11.29□□□□□ -0.6
RTTN-202ENST00000578780 TRIM65Q6PJ69 517 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 CCDC73Q6ZRK6 1079 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 RSRC2Q7L4I2 434 aaKnown RBP11.29□□□□□ -0.6
RTTN-202ENST00000578780 NIM1KQ8IY84 436 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 FSIP1Q8NA03 581 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 CNNM3Q8NE01 707 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 EHD4Q9H223 541 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 GOLPH3LQ9H4A5 285 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 MTMR4Q9NYA4 1195 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 ZNRF3Q9ULT6 936 aa11.29□□□□□ -0.6
RTTN-202ENST00000578780 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
RTTN-202ENST00000578780 COL4A5P29400 1685 aa11.28□□□□□ -0.6
RTTN-202ENST00000578780 EME2A4GXA9 379 aaPredicted RBP11.28□□□□□ -0.6
RTTN-202ENST00000578780 DDTLA6NHG4 134 aaPredicted RBP11.28□□□□□ -0.6
RTTN-202ENST00000578780 CAND2O75155 1236 aa11.28□□□□□ -0.6
RTTN-202ENST00000578780 NPM3O75607 178 aaKnown RBP11.28□□□□□ -0.6
RTTN-202ENST00000578780 GOLGA8HP0CJ92 632 aa11.28□□□□□ -0.6
RTTN-202ENST00000578780 SLURP2P0DP57 97 aa11.28□□□□□ -0.6
RTTN-202ENST00000578780 KRT2P35908 639 aa11.28□□□□□ -0.6
RTTN-202ENST00000578780 FAM107BQ9H098 131 aa11.28□□□□□ -0.6
RTTN-202ENST00000578780 CLSTN2Q9H4D0 955 aa11.28□□□□□ -0.6
RTTN-202ENST00000578780 PI4KBQ9UBF8 816 aa11.28□□□□□ -0.6
RTTN-202ENST00000578780 IGKV6D-41A0A0C4DH26 115 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 A0A1W2PQ27 194 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 A0A1W2PQ64 194 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 A0A1W2PQD8 194 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 KLRF2D3W0D1 207 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 IPO7O95373 1038 aaKnown RBP11.27□□□□□ -0.6
RTTN-202ENST00000578780 PARP1P09874 1014 aaKnown RBP11.27□□□□□ -0.6
RTTN-202ENST00000578780 VEGFAP15692 232 aaPredicted RBP11.27□□□□□ -0.6
RTTN-202ENST00000578780 MARCKSP29966 332 aaPredicted RBP11.27□□□□□ -0.6
RTTN-202ENST00000578780 TOB1P50616 345 aaPredicted RBP11.27□□□□□ -0.6
RTTN-202ENST00000578780 EIF6P56537 245 aaKnown RBP11.27□□□□□ -0.6
RTTN-202ENST00000578780 PTPAQ15257 358 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 RILPL1Q5EBL4 403 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 SH3BP5LQ7L8J4 393 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 RASGRP2Q7LDG7 609 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 OGFOD1Q8N543 542 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 MRPS27Q92552 414 aaKnown RBP11.27□□□□□ -0.6
RTTN-202ENST00000578780 ZKSCAN4Q969J2 545 aaPredicted RBP11.27□□□□□ -0.6
RTTN-202ENST00000578780 GMLQ99445 158 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 LZTS2Q9BRK4 669 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 CABP5Q9NP86 173 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 HDAC9Q9UKV0 1011 aa11.27□□□□□ -0.6
RTTN-202ENST00000578780 CYTH3O43739 400 aa11.27□□□□□ -0.61
RTTN-202ENST00000578780 NLRP5P59047 1200 aa11.27□□□□□ -0.61
RTTN-202ENST00000578780 MCM6Q14566 821 aa11.27□□□□□ -0.61
RTTN-202ENST00000578780 CRYMQ14894 314 aa11.27□□□□□ -0.61
RTTN-202ENST00000578780 USP17L2Q6R6M4 530 aa11.27□□□□□ -0.61
RTTN-202ENST00000578780 TRIM6Q9C030 488 aaPredicted RBP11.27□□□□□ -0.61
RTTN-202ENST00000578780 IRAK4Q9NWZ3 460 aa11.27□□□□□ -0.61
RTTN-202ENST00000578780 MYH6P13533 1939 aa11.27□□□□□ -0.61
RTTN-202ENST00000578780 A0A1B0GVL5 298 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 FAM196BA6NMK8 535 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 PPP6R2O75170 966 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 TTLL1O95922 423 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 MYBL2P10244 700 aa11.26□□□□□ -0.61
RTTN-202ENST00000578780 FAM160A1Q05DH4 1040 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms