RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 U2AF1L4Q8WU68 220 aaKnown RBP11.4□□□□□ -0.58
PTPRM-205ENST00000577827 AIFM3Q96NN9 605 aa11.4□□□□□ -0.58
PTPRM-205ENST00000577827 ZMYND10O75800 440 aa11.4□□□□□ -0.58
PTPRM-205ENST00000577827 GJC1P36383 396 aa11.4□□□□□ -0.58
PTPRM-205ENST00000577827 TECP42680 631 aa11.4□□□□□ -0.58
PTPRM-205ENST00000577827 FKBP3Q00688 224 aaKnown RBP11.4□□□□□ -0.58
PTPRM-205ENST00000577827 HHATQ5VTY9 493 aa11.4□□□□□ -0.58
PTPRM-205ENST00000577827 MCUR1Q96AQ8 359 aa11.4□□□□□ -0.58
PTPRM-205ENST00000577827 CDCA7Q9BWT1 371 aaPredicted RBP11.4□□□□□ -0.58
PTPRM-205ENST00000577827 MAP3K15Q6ZN16 1313 aa11.4□□□□□ -0.58
PTPRM-205ENST00000577827 LGALS16A8MUM7 142 aa11.4□□□□□ -0.58
PTPRM-205ENST00000577827 PGRMC1O00264 195 aaKnown RBP11.4□□□□□ -0.58
PTPRM-205ENST00000577827 EIF3BP55884 814 aaKnown RBP11.4□□□□□ -0.58
PTPRM-205ENST00000577827 EXOSC10Q01780 885 aaKnown RBP11.4□□□□□ -0.58
PTPRM-205ENST00000577827 C2orf54Q08AI8 447 aa11.4□□□□□ -0.58
PTPRM-205ENST00000577827 MICAL1Q8TDZ2 1067 aa11.4□□□□□ -0.58
PTPRM-205ENST00000577827 ZCCHC17Q9NP64 241 aaKnown RBP11.4□□□□□ -0.58
PTPRM-205ENST00000577827 SLC39A2Q9NP94 309 aa11.4□□□□□ -0.58
PTPRM-205ENST00000577827 GPCPD1Q9NPB8 672 aa11.4□□□□□ -0.58
PTPRM-205ENST00000577827 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.4□□□□□ -0.58
PTPRM-205ENST00000577827 SUN1O94901 812 aa11.4□□□□□ -0.59
PTPRM-205ENST00000577827 IRX5P78411 483 aaPredicted RBP11.4□□□□□ -0.59
PTPRM-205ENST00000577827 CUL1Q13616 776 aa11.4□□□□□ -0.59
PTPRM-205ENST00000577827 CCDC62Q6P9F0 684 aa11.4□□□□□ -0.59
PTPRM-205ENST00000577827 ANKRD13CQ8N6S4 541 aa11.4□□□□□ -0.59
PTPRM-205ENST00000577827 KCNB2Q92953 911 aa11.4□□□□□ -0.59
PTPRM-205ENST00000577827 TYW1Q9NV66 732 aaKnown RBP11.4□□□□□ -0.59
PTPRM-205ENST00000577827 EXOC7Q9UPT5 735 aa11.4□□□□□ -0.59
PTPRM-205ENST00000577827 USP14P54578 494 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 SRLQ86TD4 932 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 SDR42E1Q8WUS8 393 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 P3H4Q92791 437 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 VTI1AQ96AJ9 217 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 TUBE1Q9UJT0 475 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 HSPA6P17066 643 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 GYS2P54840 703 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 TMED8Q6PL24 325 aaPredicted RBP11.39□□□□□ -0.59
PTPRM-205ENST00000577827 GRK7Q8WTQ7 553 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 MRPL44Q9H9J2 332 aaKnown RBP11.39□□□□□ -0.59
PTPRM-205ENST00000577827 INTS9Q9NV88 658 aaKnown RBP11.39□□□□□ -0.59
PTPRM-205ENST00000577827 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.39□□□□□ -0.59
PTPRM-205ENST00000577827 PCDHA13Q9Y5I0 950 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 FAM169AQ9Y6X4 670 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 ANKARQ7Z5J8 1434 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 ALKQ9UM73 1620 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 CHUKO15111 745 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 EXOC3O60645 756 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 SEPT2Q15019 361 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 WDR44Q5JSH3 913 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 PALLDQ8WX93 1383 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 CCDC87Q9NVE4 849 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 PANK4Q9NVE7 773 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 ODF2LQ9ULJ1 636 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 PCDHA12Q9UN75 941 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 GCNT3O95395 438 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 KIF11P52732 1056 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 PSMD2Q13200 908 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 WDR78Q5VTH9 848 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 GPBP1Q86WP2 473 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 LARP4BQ92615 738 aaKnown RBP11.39□□□□□ -0.59
PTPRM-205ENST00000577827 EPSTI1Q96J88 318 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 GPHNQ9NQX3 736 aaPredicted RBP11.39□□□□□ -0.59
PTPRM-205ENST00000577827 TBC1D7Q9P0N9 293 aa11.39□□□□□ -0.59
PTPRM-205ENST00000577827 KLRF2D3W0D1 207 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 FERP16591 822 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 LRRC63Q05C16 580 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 ADAM9Q13443 819 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 COG1Q8WTW3 980 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 TBC1D31Q96DN5 1066 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 WDR24Q96S15 920 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 GREM2Q9H772 168 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 SAP30BPQ9UHR5 308 aaKnown RBP11.38□□□□□ -0.59
PTPRM-205ENST00000577827 USP31Q70CQ4 1352 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 N4BP1O75113 896 aaKnown RBP11.38□□□□□ -0.59
PTPRM-205ENST00000577827 ERCC3P19447 782 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 GCKP35557 465 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 EIF4A3P38919 411 aaKnown RBP11.38□□□□□ -0.59
PTPRM-205ENST00000577827 BBOF1Q8ND07 529 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 ARHGEF2Q92974 986 aaKnown RBP11.38□□□□□ -0.59
PTPRM-205ENST00000577827 DPH5Q9H2P9 285 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 A0A1W2PQC6 194 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 PRAMEF22A3QJZ6 481 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 ARHGEF35A5YM69 484 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 CCDC188H7C350 402 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 SERPING1P05155 500 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 TROVE2P10155 538 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTPRM-205ENST00000577827 LMNB1P20700 586 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 SMTNP53814 917 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 SLMAPQ14BN4 828 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 EXOC3L4Q17RC7 722 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 TTC19Q6DKK2 380 aaPredicted RBP11.38□□□□□ -0.59
PTPRM-205ENST00000577827 SHC4Q6S5L8 630 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 ARHGEF40Q8TER5 1519 aa11.38□□□□□ -0.59
PTPRM-205ENST00000577827 hCG_1984214I3L0E3 225 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 CLTAP09496 248 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 ALX1Q15699 326 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 NBPF9Q3BBW0 867 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 TRMT1LQ7Z2T5 733 aaKnown RBP11.37□□□□□ -0.59
PTPRM-205ENST00000577827 PHLDB2Q86SQ0 1253 aa11.37□□□□□ -0.59
PTPRM-205ENST00000577827 SLFN12Q8IYM2 578 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms