RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 USP17L15C9J2P7 530 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 USP17L13C9JLJ4 530 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 USP17L11C9JVI0 530 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 USP17L18D6R9N7 530 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 USP17L22D6RA61 530 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 USP17L17D6RBQ6 530 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 USP17L19D6RCP7 530 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 USP17L20D6RJB6 530 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 PRPF3O43395 683 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 CDKL5O76039 1030 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 ELNP15502 786 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 FLT3LGP49771 235 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 USP17L24Q0WX57 530 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 COG2Q14746 738 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 SLC35G1Q2M3R5 365 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 CPLX2Q6PUV4 134 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 NECAB1Q8N987 351 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 NSUN7Q8NE18 718 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 ATXN2LQ8WWM7 1075 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 NCOA5Q9HCD5 579 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 HOXC10Q9NYD6 342 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 HCN4Q9Y3Q4 1203 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 LOC285556D6RIA3 1793 aa12.91□□□□□ -0.34
CDK5RAP3-204ENST00000577664 STK36Q9NRP7 1315 aa12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 TMEM232C9JQI7 657 aa12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 RXRAP19793 462 aa12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 STAT2P52630 851 aa12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 HMGN5P82970 282 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 MDM2Q00987 491 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 STK3Q13188 491 aa12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 PABPC4Q13310 644 aaKnown RBP eCLIP12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 FAM83BQ5T0W9 1011 aa12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 TTBK2Q6IQ55 1244 aa12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 KCTD1Q719H9 257 aa12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 SPICE1Q8N0Z3 855 aa12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 USP38Q8NB14 1042 aa12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 RPAP3Q9H6T3 665 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 JMJD4Q9H9V9 463 aa12.9□□□□□ -0.34
CDK5RAP3-204ENST00000577664 PFASO15067 1338 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 MUC6Q6W4X9 2439 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 CPLX1O14810 134 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ATP2A1O14983 1001 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PLEKHA8P1O95397 391 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 GOLGA8HP0CJ92 632 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 FDPSP14324 419 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 DSG3P32926 999 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ZYXQ15942 572 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PKN1Q16512 942 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 NOL8Q76FK4 1167 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 TEX2Q8IWB9 1127 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 CCDC83Q8IWF9 413 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 CCDC144CPQ8IYA2 1237 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ADGRF4Q8IZF3 695 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 NUP88Q99567 741 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 MAF1Q9H063 256 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 CWC22Q9HCG8 908 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PNMA2Q9UL42 364 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 OGDHLQ9ULD0 1010 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PPP1R9AQ9ULJ8 1098 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PRR12Q9ULL5 1215 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 RLFQ13129 1914 aa12.89□□□□□ -0.35
CDK5RAP3-204ENST00000577664 FRMPD2Q68DX3 1309 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 CNTNAP5Q8WYK1 1306 aa12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PNMA6FA0A0J9YX94 578 aa12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PDHXO00330 501 aa12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 COL6A1P12109 1028 aa12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 OAZ1P54368 228 aa12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 SMAD3P84022 425 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 SSRP1Q08945 709 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 SYDE2Q5VT97 1194 aa12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 RASGRP2Q7LDG7 609 aa12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ADAMTS19Q8TE59 1207 aa12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 GTF3C2Q8WUA4 911 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 IPO9Q96P70 1041 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 SLF1Q9BQI6 1058 aa12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 UBA5Q9GZZ9 404 aa12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 RANBP17Q9H2T7 1088 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 SLC38A10Q9HBR0 1119 aa12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 GPCPD1Q9NPB8 672 aa12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 NAP1L2Q9ULW6 460 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 V9GY48 417 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-204ENST00000577664 hCG_1984214I3L0E3 225 aa12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ZBTB5O15062 677 aa12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 DEXIO95424 95 aa12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 TRAF1Q13077 416 aa12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PFKFB3Q16875 520 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 CCDC96Q2M329 555 aa12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 RAB11FIP4Q86YS3 637 aa12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 TRIM22Q8IYM9 498 aa12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ZNF713Q8N859 430 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 MB21D1Q8N884 522 aa12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 REPS2Q8NFH8 660 aa12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 ASB2Q96Q27 587 aa12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 UHRF1Q96T88 793 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 SH3GLB2Q9NR46 395 aa12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PARP14Q460N5 1801 aa12.87□□□□□ -0.35
CDK5RAP3-204ENST00000577664 PTPDC1A2A3K4 754 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms