RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 SGMS1Q86VZ5 419 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 UBAC1Q9BSL1 405 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 MYL10Q9BUA6 226 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 TMEM106CQ9BVX2 250 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 RIOX1Q9H6W3 641 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 KAT14Q9H8E8 782 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 FBXO40Q9UH90 709 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 DDX20Q9UHI6 824 aaKnown RBP10.16□□□□□ -0.78
SMG6-216ENST00000575176 CCPG1Q9ULG6 757 aa10.16□□□□□ -0.78
SMG6-216ENST00000575176 SEPT4O43236 478 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 ADAMTS4O75173 837 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 ALAS1P13196 640 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 IRX5P78411 483 aaPredicted RBP10.15□□□□□ -0.78
SMG6-216ENST00000575176 FUT2Q10981 343 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 TMEM63BQ5T3F8 832 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 DPP9Q86TI2 863 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 ZNF654Q8IZM8 581 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 MSL3Q8N5Y2 521 aaKnown RBP10.15□□□□□ -0.78
SMG6-216ENST00000575176 ANKLE1Q8NAG6 615 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 IL17RAQ96F46 866 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 TCEANC2Q96MN5 208 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 TRERF1Q96PN7 1200 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 LRRC2Q9BYS8 371 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 AGXT2Q9BYV1 514 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 PCDH10Q9P2E7 1040 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 BIN2Q9UBW5 565 aaPredicted RBP10.15□□□□□ -0.78
SMG6-216ENST00000575176 NRBP1Q9UHY1 535 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 SNX14Q9Y5W7 946 aa10.15□□□□□ -0.78
SMG6-216ENST00000575176 MYH7BA7E2Y1 1941 aa10.15□□□□□ -0.79
SMG6-216ENST00000575176 CHD9Q3L8U1 2897 aa10.15□□□□□ -0.79
SMG6-216ENST00000575176 FRMPD4Q14CM0 1322 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 CNTNAP5Q8WYK1 1306 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 SYNRGQ9UMZ2 1314 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 WDR81Q562E7 1941 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 MYADML2A6NDP7 307 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 IFIT3O14879 490 aaKnown RBP10.14□□□□□ -0.79
SMG6-216ENST00000575176 DDAH1O94760 285 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 PLEKHA8P1O95397 391 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 PARP1P09874 1014 aaKnown RBP10.14□□□□□ -0.79
SMG6-216ENST00000575176 CPA1P15085 419 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 LIFRP42702 1097 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 NKX3-2P78367 333 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 WTAPQ15007 396 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 TMEM67Q5HYA8 995 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 MFSD14CQ5VZR4 134 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 CCSAPQ6IQ19 270 aaPredicted RBP10.14□□□□□ -0.79
SMG6-216ENST00000575176 ARMCX2Q7L311 632 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 RALYLQ86SE5 291 aaKnown RBP10.14□□□□□ -0.79
SMG6-216ENST00000575176 CCAR1Q8IX12 1150 aaKnown RBP10.14□□□□□ -0.79
SMG6-216ENST00000575176 CCDC144CPQ8IYA2 1237 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 TBC1D5Q92609 795 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 PAWRQ96IZ0 340 aaKnown RBP10.14□□□□□ -0.79
SMG6-216ENST00000575176 MAP3K14Q99558 947 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 PRO3102Q9H379 93 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 FAM217BQ9NTX9 383 aaPredicted RBP10.14□□□□□ -0.79
SMG6-216ENST00000575176 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.14□□□□□ -0.79
SMG6-216ENST00000575176 BRPF3Q9ULD4 1205 aa10.14□□□□□ -0.79
SMG6-216ENST00000575176 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.13□□□□□ -0.79
SMG6-216ENST00000575176 KLRF2D3W0D1 207 aa10.13□□□□□ -0.79
SMG6-216ENST00000575176 EPB41L2O43491 1005 aaKnown RBP10.13□□□□□ -0.79
SMG6-216ENST00000575176 RXRAP19793 462 aa10.13□□□□□ -0.79
SMG6-216ENST00000575176 MCM5P33992 734 aa10.13□□□□□ -0.79
SMG6-216ENST00000575176 ALDH5A1P51649 535 aaPredicted RBP10.13□□□□□ -0.79
SMG6-216ENST00000575176 RPS6P62753 249 aaKnown RBP10.13□□□□□ -0.79
SMG6-216ENST00000575176 TRDNQ13061 729 aa10.13□□□□□ -0.79
SMG6-216ENST00000575176 IKQ13123 557 aaPredicted RBP10.13□□□□□ -0.79
SMG6-216ENST00000575176 SNX17Q15036 470 aa10.13□□□□□ -0.79
SMG6-216ENST00000575176 ANO1Q5XXA6 986 aa10.13□□□□□ -0.79
SMG6-216ENST00000575176 TAPT1Q6NXT6 567 aa10.13□□□□□ -0.79
SMG6-216ENST00000575176 APOA5Q6Q788 366 aa10.13□□□□□ -0.79
SMG6-216ENST00000575176 FBXL16Q8N461 479 aa10.13□□□□□ -0.79
SMG6-216ENST00000575176 TMEM87BQ96K49 555 aa10.13□□□□□ -0.79
SMG6-216ENST00000575176 SPZ1Q9BXG8 430 aa10.13□□□□□ -0.79
SMG6-216ENST00000575176 UPF3AQ9H1J1 476 aaKnown RBP10.13□□□□□ -0.79
SMG6-216ENST00000575176 CWC22Q9HCG8 908 aaKnown RBP10.13□□□□□ -0.79
SMG6-216ENST00000575176 SIP14410 1827 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 ZBTB5O15062 677 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 CAPN2P17655 700 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 HSD17B4P51659 736 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 BAATQ14032 418 aaPredicted RBP10.12□□□□□ -0.79
SMG6-216ENST00000575176 LRRC41Q15345 812 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 USH1GQ495M9 461 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 PRPF38BQ5VTL8 546 aaKnown RBP10.12□□□□□ -0.79
SMG6-216ENST00000575176 KIAA1211Q6ZU35 1233 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 RAB11FIP4Q86YS3 637 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 ANKRD35Q8N283 1001 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 SRBD1Q8N5C6 995 aaKnown RBP10.12□□□□□ -0.79
SMG6-216ENST00000575176 RGS22Q8NE09 1264 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 KLHDC9Q8NEP7 349 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 NEK1Q96PY6 1258 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 PIGSQ96S52 555 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 USP26Q9BXU7 913 aa10.12□□□□□ -0.79
SMG6-216ENST00000575176 ISY1Q9ULR0 285 aaKnown RBP10.12□□□□□ -0.79
SMG6-216ENST00000575176 GNEQ9Y223 722 aaKnown RBP10.12□□□□□ -0.79
SMG6-216ENST00000575176 ABCB11O95342 1321 aa10.11□□□□□ -0.79
SMG6-216ENST00000575176 EYSQ5T1H1 3165 aa10.11□□□□□ -0.79
SMG6-216ENST00000575176 RBM47A0AV96 593 aaKnown RBP10.11□□□□□ -0.79
SMG6-216ENST00000575176 POTEB2H3BUK9 544 aa10.11□□□□□ -0.79
SMG6-216ENST00000575176 DNM1LO00429 736 aa10.11□□□□□ -0.79
SMG6-216ENST00000575176 MSCO60682 206 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms