RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 FANCBQ8NB91 859 aa28.19■■■□□ 2.1
LITAF-213ENST00000574701 UPF3BQ9BZI7 483 aaKnown RBP28.19■■■□□ 2.1
LITAF-213ENST00000574701 A1CFQ9NQ94 594 aaKnown RBP28.19■■■□□ 2.1
LITAF-213ENST00000574701 BRPF3Q9ULD4 1205 aa28.19■■■□□ 2.1
LITAF-213ENST00000574701 DIS3Q9Y2L1 958 aaKnown RBP28.19■■■□□ 2.1
LITAF-213ENST00000574701 RBBP6Q7Z6E9 1792 aaKnown RBP28.19■■■□□ 2.1
LITAF-213ENST00000574701 APOBRQ0VD83 1088 aa28.18■■■□□ 2.1
LITAF-213ENST00000574701 TRAF1Q13077 416 aa28.18■■■□□ 2.1
LITAF-213ENST00000574701 RTN1Q16799 776 aa28.18■■■□□ 2.1
LITAF-213ENST00000574701 MTMR8Q96EF0 704 aa28.18■■■□□ 2.1
LITAF-213ENST00000574701 MAML3Q96JK9 1138 aa28.18■■■□□ 2.1
LITAF-213ENST00000574701 SPZ1Q9BXG8 430 aa28.18■■■□□ 2.1
LITAF-213ENST00000574701 AMNQ9BXJ7 453 aa28.18■■■□□ 2.1
LITAF-213ENST00000574701 CCL5P13501 91 aa28.17■■■□□ 2.1
LITAF-213ENST00000574701 PRKAR2AP13861 404 aaKnown RBP28.17■■■□□ 2.1
LITAF-213ENST00000574701 SMARCA1P28370 1054 aa28.17■■■□□ 2.1
LITAF-213ENST00000574701 MTFR1Q15390 333 aa28.17■■■□□ 2.1
LITAF-213ENST00000574701 ZNF792Q3KQV3 632 aa28.17■■■□□ 2.1
LITAF-213ENST00000574701 PIGSQ96S52 555 aa28.17■■■□□ 2.1
LITAF-213ENST00000574701 AGXT2Q9BYV1 514 aa28.17■■■□□ 2.1
LITAF-213ENST00000574701 FLRT1Q9NZU1 646 aa28.17■■■□□ 2.1
LITAF-213ENST00000574701 SEC63Q9UGP8 760 aaKnown RBP28.17■■■□□ 2.1
LITAF-213ENST00000574701 SMCHD1A6NHR9 2005 aa28.17■■■□□ 2.1
LITAF-213ENST00000574701 HTTP42858 3142 aa28.16■■■□□ 2.1
LITAF-213ENST00000574701 DNAJC25-GNG10A0A024R161 153 aa28.16■■■□□ 2.1
LITAF-213ENST00000574701 POTEB2H3BUK9 544 aa28.16■■■□□ 2.1
LITAF-213ENST00000574701 CYTH3O43739 400 aa28.16■■■□□ 2.1
LITAF-213ENST00000574701 PLEKHA8P1O95397 391 aa28.16■■■□□ 2.1
LITAF-213ENST00000574701 TRIM32Q13049 653 aa28.16■■■□□ 2.1
LITAF-213ENST00000574701 TMTC3Q6ZXV5 915 aa28.16■■■□□ 2.1
LITAF-213ENST00000574701 RRP36Q96EU6 259 aaKnown RBP28.16■■■□□ 2.1
LITAF-213ENST00000574701 RNF208Q9H0X6 261 aa28.16■■■□□ 2.1
LITAF-213ENST00000574701 PDRG1Q9NUG6 133 aa28.16■■■□□ 2.1
LITAF-213ENST00000574701 MRPL11Q9Y3B7 192 aaKnown RBP28.16■■■□□ 2.1
LITAF-213ENST00000574701 PTPDC1A2A3K4 754 aa28.15■■■□□ 2.1
LITAF-213ENST00000574701 NFIBO00712 420 aa28.15■■■□□ 2.1
LITAF-213ENST00000574701 METAP2P50579 478 aaKnown RBP eCLIP28.15■■■□□ 2.1
LITAF-213ENST00000574701 SOX10P56693 466 aa28.15■■■□□ 2.1
LITAF-213ENST00000574701 UNC93B1Q9H1C4 597 aa28.15■■■□□ 2.1
LITAF-213ENST00000574701 UPF2Q9HAU5 1272 aaKnown RBP28.15■■■□□ 2.1
LITAF-213ENST00000574701 HMX1Q9NP08 348 aaPredicted RBP28.15■■■□□ 2.1
LITAF-213ENST00000574701 RPTORQ8N122 1335 aa28.15■■■□□ 2.1
LITAF-213ENST00000574701 BAZ2BQ9UIF8 2168 aaKnown RBP28.14■■■□□ 2.1
LITAF-213ENST00000574701 PNMA6FA0A0J9YX94 578 aa28.14■■■□□ 2.1
LITAF-213ENST00000574701 SLC35G1Q2M3R5 365 aa28.14■■■□□ 2.1
LITAF-213ENST00000574701 CLEC4DQ8WXI8 215 aa28.14■■■□□ 2.1
LITAF-213ENST00000574701 PIBF1Q8WXW3 757 aa28.14■■■□□ 2.1
LITAF-213ENST00000574701 CYP39A1Q9NYL5 469 aa28.14■■■□□ 2.1
LITAF-213ENST00000574701 CCDC196A0A1B0GTZ2 297 aa28.13■■■□□ 2.09
LITAF-213ENST00000574701 CYP2C19P33261 490 aa28.13■■■□□ 2.09
LITAF-213ENST00000574701 CACNB2Q08289 660 aaPredicted RBP28.13■■■□□ 2.09
LITAF-213ENST00000574701 PPP2R5BQ15173 497 aa28.13■■■□□ 2.09
LITAF-213ENST00000574701 MAP3K21Q5TCX8 1036 aa28.13■■■□□ 2.09
LITAF-213ENST00000574701 RNF207Q6ZRF8 634 aa28.13■■■□□ 2.09
LITAF-213ENST00000574701 MCF2L2Q86YR7 1114 aa28.13■■■□□ 2.09
LITAF-213ENST00000574701 SRBD1Q8N5C6 995 aaKnown RBP28.13■■■□□ 2.09
LITAF-213ENST00000574701 MSL3Q8N5Y2 521 aaKnown RBP28.13■■■□□ 2.09
LITAF-213ENST00000574701 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.13■■■□□ 2.093e-7■■□□□ 13.1
LITAF-213ENST00000574701 ZNF467Q7Z7K2 595 aaPredicted RBP28.12■■■□□ 2.09
LITAF-213ENST00000574701 CMTR1Q8N1G2 835 aaKnown RBP28.12■■■□□ 2.09
LITAF-213ENST00000574701 IL17RAQ96F46 866 aa28.12■■■□□ 2.09
LITAF-213ENST00000574701 TINF2Q9BSI4 451 aa28.12■■■□□ 2.09
LITAF-213ENST00000574701 PCDHA1Q9Y5I3 950 aa28.12■■■□□ 2.09
LITAF-213ENST00000574701 BAATQ14032 418 aaPredicted RBP28.11■■■□□ 2.09
LITAF-213ENST00000574701 TOB2Q14106 344 aaPredicted RBP28.11■■■□□ 2.09
LITAF-213ENST00000574701 IFFO2Q5TF58 517 aa28.11■■■□□ 2.09
LITAF-213ENST00000574701 FAM133AQ8N9E0 248 aa28.11■■■□□ 2.09
LITAF-213ENST00000574701 MAF1Q9H063 256 aa28.11■■■□□ 2.09
LITAF-213ENST00000574701 NID2Q14112 1375 aa28.11■■■□□ 2.09
LITAF-213ENST00000574701 PPP1R11O60927 126 aaPredicted RBP28.1■■■□□ 2.09
LITAF-213ENST00000574701 CALML3P27482 149 aa28.1■■■□□ 2.09
LITAF-213ENST00000574701 SLC30A10Q6XR72 485 aa28.1■■■□□ 2.09
LITAF-213ENST00000574701 CCDC82Q8N4S0 544 aa28.1■■■□□ 2.09
LITAF-213ENST00000574701 ADD3Q9UEY8 706 aaKnown RBP28.1■■■□□ 2.09
LITAF-213ENST00000574701 SYNGAP1Q96PV0 1343 aa28.1■■■□□ 2.09
LITAF-213ENST00000574701 GJB1P08034 283 aa28.09■■■□□ 2.09
LITAF-213ENST00000574701 CNTN2Q02246 1040 aa28.09■■■□□ 2.09
LITAF-213ENST00000574701 RGS22Q8NE09 1264 aa28.09■■■□□ 2.09
LITAF-213ENST00000574701 C22orf23Q9BZE7 217 aa28.09■■■□□ 2.09
LITAF-213ENST00000574701 PAK6Q9NQU5 681 aaPredicted RBP28.09■■■□□ 2.09
LITAF-213ENST00000574701 LCTP09848 1927 aa28.09■■■□□ 2.09
LITAF-213ENST00000574701 CNTNAP5Q8WYK1 1306 aa28.09■■■□□ 2.09
LITAF-213ENST00000574701 POTEFA5A3E0 1075 aa28.08■■■□□ 2.09
LITAF-213ENST00000574701 IGHA2P01877 340 aa28.08■■■□□ 2.09
LITAF-213ENST00000574701 CYBAP13498 195 aa28.08■■■□□ 2.09
LITAF-213ENST00000574701 EVCP57679 992 aa28.08■■■□□ 2.09
LITAF-213ENST00000574701 RPS6P62753 249 aaKnown RBP28.08■■■□□ 2.09
LITAF-213ENST00000574701 ANKRD1Q15327 319 aa28.08■■■□□ 2.09
LITAF-213ENST00000574701 NRBP1Q9UHY1 535 aa28.08■■■□□ 2.09
LITAF-213ENST00000574701 CNPY2Q9Y2B0 182 aa28.08■■■□□ 2.09
LITAF-213ENST00000574701 ASB14A6NK59 587 aa28.07■■■□□ 2.08
LITAF-213ENST00000574701 CNGA1P29973 690 aa28.07■■■□□ 2.08
LITAF-213ENST00000574701 CDC27P30260 824 aa28.07■■■□□ 2.08
LITAF-213ENST00000574701 CCND3P30281 292 aaPredicted RBP28.07■■■□□ 2.08
LITAF-213ENST00000574701 MAMDC4Q6UXC1 1216 aa28.07■■■□□ 2.08
LITAF-213ENST00000574701 FGD4Q96M96 766 aa28.07■■■□□ 2.08
LITAF-213ENST00000574701 DEFB118Q96PH6 123 aa28.07■■■□□ 2.08
LITAF-213ENST00000574701 MPHOSPH6Q99547 160 aaKnown RBP28.07■■■□□ 2.08
LITAF-213ENST00000574701 SOWAHBA6NEL2 793 aa28.06■■■□□ 2.08
LITAF-213ENST00000574701 PDIA3P30101 505 aaKnown RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms