RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 SCRN1Q12765 414 aa18.18■□□□□ 0.5
CCNE1-204ENST00000574121 STK3Q13188 491 aa18.18■□□□□ 0.5
CCNE1-204ENST00000574121 ME3Q16798 604 aa18.18■□□□□ 0.5
CCNE1-204ENST00000574121 CCDC82Q8N4S0 544 aa18.18■□□□□ 0.5
CCNE1-204ENST00000574121 ZNF713Q8N859 430 aaPredicted RBP18.18■□□□□ 0.5
CCNE1-204ENST00000574121 RGS22Q8NE09 1264 aa18.18■□□□□ 0.5
CCNE1-204ENST00000574121 GTF3C6Q969F1 213 aa18.18■□□□□ 0.5
CCNE1-204ENST00000574121 GJD2Q9UKL4 321 aa18.18■□□□□ 0.5
CCNE1-204ENST00000574121 MRPL11Q9Y3B7 192 aaKnown RBP18.18■□□□□ 0.5
CCNE1-204ENST00000574121 PCDHA1Q9Y5I3 950 aa18.18■□□□□ 0.5
CCNE1-204ENST00000574121 PRPF3O43395 683 aaKnown RBP18.17■□□□□ 0.5
CCNE1-204ENST00000574121 PPP1R11O60927 126 aaPredicted RBP18.17■□□□□ 0.5
CCNE1-204ENST00000574121 SLC4A3P48751 1232 aa18.17■□□□□ 0.5
CCNE1-204ENST00000574121 AKAP17AQ02040 695 aaKnown RBP18.17■□□□□ 0.5
CCNE1-204ENST00000574121 MAP2K5Q13163 448 aa18.17■□□□□ 0.5
CCNE1-204ENST00000574121 IRF5Q13568 498 aa18.17■□□□□ 0.5
CCNE1-204ENST00000574121 USH1GQ495M9 461 aa18.17■□□□□ 0.5
CCNE1-204ENST00000574121 NOL8Q76FK4 1167 aaKnown RBP18.17■□□□□ 0.5
CCNE1-204ENST00000574121 TRIM22Q8IYM9 498 aa18.17■□□□□ 0.5
CCNE1-204ENST00000574121 SAMD3Q8N6K7 520 aa18.17■□□□□ 0.5
CCNE1-204ENST00000574121 USP6NLQ92738 828 aa18.17■□□□□ 0.5
CCNE1-204ENST00000574121 MMP19Q99542 508 aa18.17■□□□□ 0.5
CCNE1-204ENST00000574121 HOMER2Q9NSB8 354 aa18.17■□□□□ 0.5
CCNE1-204ENST00000574121 SLC5A4Q9NY91 659 aa18.17■□□□□ 0.5
CCNE1-204ENST00000574121 V9GY48 417 aaPredicted RBP18.17■□□□□ 0.5
CCNE1-204ENST00000574121 PFASO15067 1338 aa18.17■□□□□ 0.5
CCNE1-204ENST00000574121 HOXC6P09630 235 aa18.16■□□□□ 0.5
CCNE1-204ENST00000574121 XRCC5P13010 732 aaKnown RBP18.16■□□□□ 0.5
CCNE1-204ENST00000574121 ADORA2AP29274 412 aa18.16■□□□□ 0.5
CCNE1-204ENST00000574121 RGS2P41220 211 aa18.16■□□□□ 0.5
CCNE1-204ENST00000574121 FLT3LGP49771 235 aa18.16■□□□□ 0.5
CCNE1-204ENST00000574121 PRKCZQ05513 592 aa18.16■□□□□ 0.5
CCNE1-204ENST00000574121 MCF2L2Q86YR7 1114 aa18.16■□□□□ 0.5
CCNE1-204ENST00000574121 TEX2Q8IWB9 1127 aa18.16■□□□□ 0.5
CCNE1-204ENST00000574121 CLEC4DQ8WXI8 215 aa18.16■□□□□ 0.5
CCNE1-204ENST00000574121 ZNF236Q9UL36 1845 aa18.15■□□□□ 0.5
CCNE1-204ENST00000574121 ECM2O94769 699 aaPredicted RBP18.15■□□□□ 0.5
CCNE1-204ENST00000574121 LARGE1O95461 756 aa18.15■□□□□ 0.5
CCNE1-204ENST00000574121 GHRHRQ02643 423 aa18.15■□□□□ 0.5
CCNE1-204ENST00000574121 MUM1L1Q5H9M0 696 aa18.15■□□□□ 0.5
CCNE1-204ENST00000574121 TRMT44Q8IYL2 757 aaKnown RBP18.15■□□□□ 0.5
CCNE1-204ENST00000574121 ANKRD35Q8N283 1001 aa18.15■□□□□ 0.5
CCNE1-204ENST00000574121 PIBF1Q8WXW3 757 aa18.15■□□□□ 0.5
CCNE1-204ENST00000574121 DDX11Q96FC9 970 aa18.15■□□□□ 0.5
CCNE1-204ENST00000574121 APBA2Q99767 749 aa18.15■□□□□ 0.5
CCNE1-204ENST00000574121 A1CFQ9NQ94 594 aaKnown RBP18.15■□□□□ 0.5
CCNE1-204ENST00000574121 MAP3K20Q9NYL2 800 aaKnown RBP18.15■□□□□ 0.5
CCNE1-204ENST00000574121 DIS3Q9Y2L1 958 aaKnown RBP18.15■□□□□ 0.5
CCNE1-204ENST00000574121 PTPN22Q9Y2R2 807 aa18.15■□□□□ 0.5
CCNE1-204ENST00000574121 CASP8AP2Q9UKL3 1982 aa18.15■□□□□ 0.5
CCNE1-204ENST00000574121 DNAJC25-GNG10A0A024R161 153 aa18.14■□□□□ 0.49
CCNE1-204ENST00000574121 NFIBO00712 420 aa18.14■□□□□ 0.49
CCNE1-204ENST00000574121 SCG2P13521 617 aa18.14■□□□□ 0.49
CCNE1-204ENST00000574121 SSRP1Q08945 709 aaKnown RBP18.14■□□□□ 0.49
CCNE1-204ENST00000574121 PFKFB3Q16875 520 aaPredicted RBP18.14■□□□□ 0.49
CCNE1-204ENST00000574121 PPP1R18Q6NYC8 613 aa18.14■□□□□ 0.49
CCNE1-204ENST00000574121 FBXO46Q6PJ61 603 aaPredicted RBP18.14■□□□□ 0.49
CCNE1-204ENST00000574121 FAM177A1Q8N128 213 aaPredicted RBP18.14■□□□□ 0.49
CCNE1-204ENST00000574121 PXYLP1Q8TE99 480 aa18.14■□□□□ 0.49
CCNE1-204ENST00000574121 PHKBQ93100 1093 aa18.14■□□□□ 0.49
CCNE1-204ENST00000574121 LLPHQ9BRT6 129 aaKnown RBP18.14■□□□□ 0.49
CCNE1-204ENST00000574121 GABRQQ9UN88 632 aa18.14■□□□□ 0.49
CCNE1-204ENST00000574121 STK36Q9NRP7 1315 aa18.14■□□□□ 0.49
CCNE1-204ENST00000574121 MGAMO43451 1857 aa18.14■□□□□ 0.49
CCNE1-204ENST00000574121 DEXIO95424 95 aa18.13■□□□□ 0.49
CCNE1-204ENST00000574121 NSMFQ6X4W1 530 aa18.13■□□□□ 0.49
CCNE1-204ENST00000574121 HEATR3Q7Z4Q2 680 aa18.13■□□□□ 0.49
CCNE1-204ENST00000574121 DPP9Q86TI2 863 aa18.13■□□□□ 0.49
CCNE1-204ENST00000574121 NECAB1Q8N987 351 aa18.13■□□□□ 0.49
CCNE1-204ENST00000574121 RAET1EQ8TD07 263 aa18.13■□□□□ 0.49
CCNE1-204ENST00000574121 SLC26A6Q9BXS9 759 aa18.13■□□□□ 0.49
CCNE1-204ENST00000574121 BARHL2Q9NY43 387 aa18.13■□□□□ 0.49
CCNE1-204ENST00000574121 CYP39A1Q9NYL5 469 aa18.13■□□□□ 0.49
CCNE1-204ENST00000574121 hCG_1642624A0A1W2PR95 340 aa18.12■□□□□ 0.49
CCNE1-204ENST00000574121 CD2BP2O95400 341 aaKnown RBP18.12■□□□□ 0.49
CCNE1-204ENST00000574121 TAL1P17542 331 aaPredicted RBP18.12■□□□□ 0.49
CCNE1-204ENST00000574121 PKN1Q16512 942 aa18.12■□□□□ 0.49
CCNE1-204ENST00000574121 RNF207Q6ZRF8 634 aa18.12■□□□□ 0.49
CCNE1-204ENST00000574121 ZNF467Q7Z7K2 595 aaPredicted RBP18.12■□□□□ 0.49
CCNE1-204ENST00000574121 CCDC12Q8WUD4 166 aaPredicted RBP18.12■□□□□ 0.49
CCNE1-204ENST00000574121 TMX3Q96JJ7 454 aa18.12■□□□□ 0.49
CCNE1-204ENST00000574121 ZSWIM8A7E2V4 1837 aa18.12■□□□□ 0.49
CCNE1-204ENST00000574121 LOC102724159A0A0B4J2E5 919 aa18.11■□□□□ 0.49
CCNE1-204ENST00000574121 POTEB2H3BUK9 544 aa18.11■□□□□ 0.49
CCNE1-204ENST00000574121 OPLAHO14841 1288 aa18.11■□□□□ 0.49
CCNE1-204ENST00000574121 COBLO75128 1261 aa18.11■□□□□ 0.49
CCNE1-204ENST00000574121 CTDNEP1O95476 244 aa18.11■□□□□ 0.49
CCNE1-204ENST00000574121 CYP2B6P20813 491 aa18.11■□□□□ 0.49
CCNE1-204ENST00000574121 HSD17B4P51659 736 aa18.11■□□□□ 0.49
CCNE1-204ENST00000574121 RPS6P62753 249 aaKnown RBP18.11■□□□□ 0.49
CCNE1-204ENST00000574121 PWP2Q15269 919 aaKnown RBP18.11■□□□□ 0.49
CCNE1-204ENST00000574121 ZNF792Q3KQV3 632 aa18.11■□□□□ 0.49
CCNE1-204ENST00000574121 WWC2Q6AWC2 1192 aa18.11■□□□□ 0.49
CCNE1-204ENST00000574121 MSL3Q8N5Y2 521 aaKnown RBP18.11■□□□□ 0.49
CCNE1-204ENST00000574121 FAM133AQ8N9E0 248 aa18.11■□□□□ 0.49
CCNE1-204ENST00000574121 SLAIN1Q8ND83 568 aa18.11■□□□□ 0.49
CCNE1-204ENST00000574121 NSUN7Q8NE18 718 aaKnown RBP18.11■□□□□ 0.49
CCNE1-204ENST00000574121 WASF1Q92558 559 aa18.11■□□□□ 0.49
CCNE1-204ENST00000574121 SNX21Q969T3 373 aa18.11■□□□□ 0.49
CCNE1-204ENST00000574121 GLT8D2Q9H1C3 349 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms