RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 LRRC2Q9BYS8 371 aa32.38■■■□□ 2.77
SCARF1-207ENST00000573867 VAT1LQ9HCJ6 419 aa32.38■■■□□ 2.77
SCARF1-207ENST00000573867 PFASO15067 1338 aa32.37■■■□□ 2.77
SCARF1-207ENST00000573867 SYNGAP1Q96PV0 1343 aa32.37■■■□□ 2.77
SCARF1-207ENST00000573867 SEPT4O43236 478 aa32.37■■■□□ 2.77
SCARF1-207ENST00000573867 QRICH1Q2TAL8 776 aa32.37■■■□□ 2.77
SCARF1-207ENST00000573867 MSL3Q8N5Y2 521 aaKnown RBP32.37■■■□□ 2.77
SCARF1-207ENST00000573867 MYL10Q9BUA6 226 aa32.37■■■□□ 2.77
SCARF1-207ENST00000573867 NRBP1Q9UHY1 535 aa32.37■■■□□ 2.77
SCARF1-207ENST00000573867 DDX49Q9Y6V7 483 aaKnown RBP32.37■■■□□ 2.77
SCARF1-207ENST00000573867 USH1GQ495M9 461 aa32.36■■■□□ 2.77
SCARF1-207ENST00000573867 KCNB2Q92953 911 aa32.36■■■□□ 2.77
SCARF1-207ENST00000573867 TMEM87BQ96K49 555 aa32.36■■■□□ 2.77
SCARF1-207ENST00000573867 BAATQ14032 418 aaPredicted RBP32.35■■■□□ 2.77
SCARF1-207ENST00000573867 SLC30A10Q6XR72 485 aa32.35■■■□□ 2.77
SCARF1-207ENST00000573867 ZNF654Q8IZM8 581 aa32.35■■■□□ 2.77
SCARF1-207ENST00000573867 MTMR8Q96EF0 704 aa32.35■■■□□ 2.77
SCARF1-207ENST00000573867 NEK1Q96PY6 1258 aa32.35■■■□□ 2.77
SCARF1-207ENST00000573867 CDKN2AIPQ9NXV6 580 aaPredicted RBP32.35■■■□□ 2.77
SCARF1-207ENST00000573867 DHX16O60231 1041 aaKnown RBP32.34■■■□□ 2.77
SCARF1-207ENST00000573867 MSCO60682 206 aa32.34■■■□□ 2.77
SCARF1-207ENST00000573867 ARMCX2Q7L311 632 aa32.34■■■□□ 2.77
SCARF1-207ENST00000573867 CATIPQ7Z7H3 387 aa32.34■■■□□ 2.77
SCARF1-207ENST00000573867 CYTH3O43739 400 aa32.33■■■□□ 2.77
SCARF1-207ENST00000573867 PPP1R11O60927 126 aaPredicted RBP32.33■■■□□ 2.77
SCARF1-207ENST00000573867 HSPA4P34932 840 aa32.33■■■□□ 2.77
SCARF1-207ENST00000573867 EXOSC10Q01780 885 aaKnown RBP32.33■■■□□ 2.77
SCARF1-207ENST00000573867 CCDC144CPQ8IYA2 1237 aa32.33■■■□□ 2.77
SCARF1-207ENST00000573867 TCEANC2Q96MN5 208 aa32.33■■■□□ 2.77
SCARF1-207ENST00000573867 KATNBL1Q9H079 304 aa32.33■■■□□ 2.77
SCARF1-207ENST00000573867 PNMA2Q9UL42 364 aa32.33■■■□□ 2.77
SCARF1-207ENST00000573867 NECAB2Q7Z6G3 386 aa32.32■■■□□ 2.76
SCARF1-207ENST00000573867 NUP133Q8WUM0 1156 aa32.32■■■□□ 2.76
SCARF1-207ENST00000573867 LENG1Q96BZ8 264 aaPredicted RBP32.32■■■□□ 2.76
SCARF1-207ENST00000573867 CNPY2Q9Y2B0 182 aa32.32■■■□□ 2.76
SCARF1-207ENST00000573867 MCM3APO60318 1980 aa32.32■■■□□ 2.76
SCARF1-207ENST00000573867 LIFRP42702 1097 aa32.31■■■□□ 2.76
SCARF1-207ENST00000573867 RIOX1Q9H6W3 641 aa32.31■■■□□ 2.76
SCARF1-207ENST00000573867 SNX14Q9Y5W7 946 aa32.31■■■□□ 2.76
SCARF1-207ENST00000573867 PTPDC1A2A3K4 754 aa32.3■■■□□ 2.76
SCARF1-207ENST00000573867 LRRC37A2A6NM11 1700 aa32.3■■■□□ 2.76
SCARF1-207ENST00000573867 DDAH1O94760 285 aa32.3■■■□□ 2.76
SCARF1-207ENST00000573867 COL6A1P12109 1028 aa32.3■■■□□ 2.76
SCARF1-207ENST00000573867 FBXO11Q86XK2 927 aa32.3■■■□□ 2.76
SCARF1-207ENST00000573867 TBC1D5Q92609 795 aa32.3■■■□□ 2.76
SCARF1-207ENST00000573867 ZHX1Q9UKY1 873 aaPredicted RBP32.3■■■□□ 2.76
SCARF1-207ENST00000573867 REC8O95072 547 aa32.29■■■□□ 2.76
SCARF1-207ENST00000573867 RXRAP19793 462 aa32.29■■■□□ 2.76
SCARF1-207ENST00000573867 RPS6P62753 249 aaKnown RBP32.29■■■□□ 2.76
SCARF1-207ENST00000573867 ACVR2BQ13705 512 aa32.29■■■□□ 2.76
SCARF1-207ENST00000573867 NFXL1Q6ZNB6 911 aa32.29■■■□□ 2.76
SCARF1-207ENST00000573867 RAB11FIP4Q86YS3 637 aa32.29■■■□□ 2.76
SCARF1-207ENST00000573867 MAP3K14Q99558 947 aa32.29■■■□□ 2.76
SCARF1-207ENST00000573867 C11orf49Q9H6J7 331 aa32.29■■■□□ 2.76
SCARF1-207ENST00000573867 ABCB11O95342 1321 aa32.28■■■□□ 2.76
SCARF1-207ENST00000573867 ADCY6O43306 1168 aa32.28■■■□□ 2.76
SCARF1-207ENST00000573867 CPA1P15085 419 aa32.28■■■□□ 2.76
SCARF1-207ENST00000573867 CALML3P27482 149 aa32.28■■■□□ 2.76
SCARF1-207ENST00000573867 KRT32Q14532 448 aa32.28■■■□□ 2.76
SCARF1-207ENST00000573867 RNF207Q6ZRF8 634 aa32.28■■■□□ 2.76
SCARF1-207ENST00000573867 DHX32Q7L7V1 743 aaKnown RBP32.28■■■□□ 2.76
SCARF1-207ENST00000573867 TMTC2Q8N394 836 aa32.28■■■□□ 2.76
SCARF1-207ENST00000573867 PIGSQ96S52 555 aa32.28■■■□□ 2.76
SCARF1-207ENST00000573867 CCDC69A6NI79 296 aa32.27■■■□□ 2.76
SCARF1-207ENST00000573867 ZBTB5O15062 677 aa32.27■■■□□ 2.76
SCARF1-207ENST00000573867 AKR1A1P14550 325 aa32.27■■■□□ 2.76
SCARF1-207ENST00000573867 GJC2Q5T442 439 aaPredicted RBP32.27■■■□□ 2.76
SCARF1-207ENST00000573867 SGMS1Q86VZ5 419 aa32.27■■■□□ 2.76
SCARF1-207ENST00000573867 HOMER1Q86YM7 354 aa32.27■■■□□ 2.76
SCARF1-207ENST00000573867 ABHD16BQ9H3Z7 469 aa32.27■■■□□ 2.76
SCARF1-207ENST00000573867 ALPK3Q96L96 1907 aa32.27■■■□□ 2.76
SCARF1-207ENST00000573867 OPLAHO14841 1288 aa32.26■■■□□ 2.75
SCARF1-207ENST00000573867 MORC4Q8TE76 937 aa32.26■■■□□ 2.75
SCARF1-207ENST00000573867 HTATIP2Q9BUP3 242 aa32.26■■■□□ 2.75
SCARF1-207ENST00000573867 ASB14A6NK59 587 aa32.25■■■□□ 2.75
SCARF1-207ENST00000573867 PLEKHA8P1O95397 391 aa32.25■■■□□ 2.75
SCARF1-207ENST00000573867 ALDH5A1P51649 535 aaPredicted RBP32.25■■■□□ 2.75
SCARF1-207ENST00000573867 PRPF38BQ5VTL8 546 aaKnown RBP32.25■■■□□ 2.75
SCARF1-207ENST00000573867 RGS22Q8NE09 1264 aa32.25■■■□□ 2.75
SCARF1-207ENST00000573867 AMNQ9BXJ7 453 aa32.25■■■□□ 2.75
SCARF1-207ENST00000573867 MYH6P13533 1939 aa32.24■■■□□ 2.75
SCARF1-207ENST00000573867 DNAH12Q6ZR08 3092 aa32.24■■■□□ 2.75
SCARF1-207ENST00000573867 DNM1LO00429 736 aa32.24■■■□□ 2.75
SCARF1-207ENST00000573867 RARBP10826 455 aa32.24■■■□□ 2.75
SCARF1-207ENST00000573867 LRRC41Q15345 812 aa32.24■■■□□ 2.75
SCARF1-207ENST00000573867 CCDC144BQ3MJ40 725 aa32.24■■■□□ 2.75
SCARF1-207ENST00000573867 CTCFLQ8NI51 663 aaPredicted RBP32.24■■■□□ 2.75
SCARF1-207ENST00000573867 DPF3Q92784 378 aa32.24■■■□□ 2.75
SCARF1-207ENST00000573867 JAKMIP1Q96N16 626 aaKnown RBP32.24■■■□□ 2.75
SCARF1-207ENST00000573867 XPNPEP3Q9NQH7 507 aa32.24■■■□□ 2.75
SCARF1-207ENST00000573867 COL20A1Q9P218 1284 aa32.24■■■□□ 2.75
SCARF1-207ENST00000573867 BRPF3Q9ULD4 1205 aa32.24■■■□□ 2.75
SCARF1-207ENST00000573867 FAM184BQ9ULE4 1060 aa32.24■■■□□ 2.75
SCARF1-207ENST00000573867 PGK1P00558 417 aa32.23■■■□□ 2.75
SCARF1-207ENST00000573867 SRBD1Q8N5C6 995 aaKnown RBP32.23■■■□□ 2.75
SCARF1-207ENST00000573867 USP26Q9BXU7 913 aa32.23■■■□□ 2.75
SCARF1-207ENST00000573867 MRPL11Q9Y3B7 192 aaKnown RBP32.23■■■□□ 2.75
SCARF1-207ENST00000573867 SLC12A7Q9Y666 1083 aa32.23■■■□□ 2.75
SCARF1-207ENST00000573867 BAZ2BQ9UIF8 2168 aaKnown RBP32.22■■■□□ 2.75
SCARF1-207ENST00000573867 IRX5P78411 483 aaPredicted RBP32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms