RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 CTDP1Q9Y5B0 961 aaPredicted RBP20.35■□□□□ 0.85
SMG6-212ENST00000573153 TNKSO95271 1327 aa20.34■□□□□ 0.85
SMG6-212ENST00000573153 WDR19Q8NEZ3 1342 aa20.34■□□□□ 0.85
SMG6-212ENST00000573153 POTEB2H3BUK9 544 aa20.34■□□□□ 0.85
SMG6-212ENST00000573153 GOLGA8HP0CJ92 632 aa20.34■□□□□ 0.85
SMG6-212ENST00000573153 PTGS1P23219 599 aa20.34■□□□□ 0.85
SMG6-212ENST00000573153 CST5P28325 142 aaPredicted RBP20.34■□□□□ 0.85
SMG6-212ENST00000573153 IMMTQ16891 758 aaKnown RBP20.34■□□□□ 0.85
SMG6-212ENST00000573153 SLC35G1Q2M3R5 365 aa20.34■□□□□ 0.85
SMG6-212ENST00000573153 STOX1Q6ZVD7 989 aa20.34■□□□□ 0.85
SMG6-212ENST00000573153 PNMA1Q8ND90 353 aa20.34■□□□□ 0.85
SMG6-212ENST00000573153 ZSCAN10Q96SZ4 725 aaPredicted RBP20.34■□□□□ 0.85
SMG6-212ENST00000573153 UPF3AQ9H1J1 476 aaKnown RBP20.34■□□□□ 0.85
SMG6-212ENST00000573153 CTNNA3Q9UI47 895 aa20.34■□□□□ 0.85
SMG6-212ENST00000573153 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.33■□□□□ 0.85
SMG6-212ENST00000573153 KBTBD13C9JR72 458 aa20.33■□□□□ 0.85
SMG6-212ENST00000573153 COL9A3Q14050 684 aaPredicted RBP20.33■□□□□ 0.85
SMG6-212ENST00000573153 CCDC144BQ3MJ40 725 aa20.33■□□□□ 0.85
SMG6-212ENST00000573153 TRIM60Q495X7 471 aa20.33■□□□□ 0.85
SMG6-212ENST00000573153 TMEM63BQ5T3F8 832 aa20.33■□□□□ 0.85
SMG6-212ENST00000573153 FERMT2Q96AC1 680 aa20.33■□□□□ 0.85
SMG6-212ENST00000573153 ABHD16BQ9H3Z7 469 aa20.33■□□□□ 0.85
SMG6-212ENST00000573153 FAM184BQ9ULE4 1060 aa20.33■□□□□ 0.85
SMG6-212ENST00000573153 A0A1W2PQ45 241 aaPredicted RBP20.32■□□□□ 0.84
SMG6-212ENST00000573153 A0A1W2PQY0 241 aa20.32■□□□□ 0.84
SMG6-212ENST00000573153 DUSP11O75319 330 aaKnown RBP20.32■□□□□ 0.84
SMG6-212ENST00000573153 TAPT1Q6NXT6 567 aa20.32■□□□□ 0.84
SMG6-212ENST00000573153 SLC30A10Q6XR72 485 aa20.32■□□□□ 0.84
SMG6-212ENST00000573153 RUFY2Q8WXA3 655 aa20.32■□□□□ 0.84
SMG6-212ENST00000573153 UBA5Q9GZZ9 404 aa20.32■□□□□ 0.84
SMG6-212ENST00000573153 PDLIM7Q9NR12 457 aa20.32■□□□□ 0.84
SMG6-212ENST00000573153 GNEQ9Y223 722 aaKnown RBP20.32■□□□□ 0.84
SMG6-212ENST00000573153 GJA9P57773 515 aa20.31■□□□□ 0.84
SMG6-212ENST00000573153 GPATCH4Q5T3I0 446 aaKnown RBP20.31■□□□□ 0.84
SMG6-212ENST00000573153 SH3RF1Q7Z6J0 888 aa20.31■□□□□ 0.84
SMG6-212ENST00000573153 SENP2Q9HC62 589 aa20.31■□□□□ 0.84
SMG6-212ENST00000573153 ITGB8P26012 769 aa20.3■□□□□ 0.84
SMG6-212ENST00000573153 BAATQ14032 418 aaPredicted RBP20.3■□□□□ 0.84
SMG6-212ENST00000573153 CCDC178Q5BJE1 867 aa20.3■□□□□ 0.84
SMG6-212ENST00000573153 NSMFQ6X4W1 530 aa20.3■□□□□ 0.84
SMG6-212ENST00000573153 CENPQQ7L2Z9 268 aaPredicted RBP20.3■□□□□ 0.84
SMG6-212ENST00000573153 RNF180Q86T96 592 aa20.3■□□□□ 0.84
SMG6-212ENST00000573153 IQCA1Q86XH1 822 aa20.3■□□□□ 0.84
SMG6-212ENST00000573153 MAP4K1Q92918 833 aa20.3■□□□□ 0.84
SMG6-212ENST00000573153 TSEN34Q9BSV6 310 aaKnown RBP20.3■□□□□ 0.84
SMG6-212ENST00000573153 KRT23Q9C075 422 aa20.3■□□□□ 0.84
SMG6-212ENST00000573153 PDGFCQ9NRA1 345 aa20.3■□□□□ 0.84
SMG6-212ENST00000573153 TRIM43BA6NCK2 446 aa20.29■□□□□ 0.84
SMG6-212ENST00000573153 EDNRBP24530 442 aa20.29■□□□□ 0.84
SMG6-212ENST00000573153 ACLYP53396 1101 aa20.29■□□□□ 0.84
SMG6-212ENST00000573153 ANTXR2P58335 489 aa20.29■□□□□ 0.84
SMG6-212ENST00000573153 STAG2Q8N3U4 1231 aa20.29■□□□□ 0.84
SMG6-212ENST00000573153 TRIM43Q96BQ3 446 aaPredicted RBP20.29■□□□□ 0.84
SMG6-212ENST00000573153 LRCH3Q96II8 777 aa20.29■□□□□ 0.84
SMG6-212ENST00000573153 CNNM2Q9H8M5 875 aa20.29■□□□□ 0.84
SMG6-212ENST00000573153 ATP11BQ9Y2G3 1177 aa20.29■□□□□ 0.84
SMG6-212ENST00000573153 MYCNP04198 464 aaPredicted RBP20.28■□□□□ 0.84
SMG6-212ENST00000573153 SMPD1P17405 629 aa20.28■□□□□ 0.84
SMG6-212ENST00000573153 ALDH5A1P51649 535 aaPredicted RBP20.28■□□□□ 0.84
SMG6-212ENST00000573153 MDM2Q00987 491 aaPredicted RBP20.28■□□□□ 0.84
SMG6-212ENST00000573153 KCNA10Q16322 511 aa20.28■□□□□ 0.84
SMG6-212ENST00000573153 FBXO16Q8IX29 292 aaPredicted RBP20.28■□□□□ 0.84
SMG6-212ENST00000573153 MTMR8Q96EF0 704 aa20.28■□□□□ 0.84
SMG6-212ENST00000573153 LSG1Q9H089 658 aaKnown RBP20.28■□□□□ 0.84
SMG6-212ENST00000573153 KAT14Q9H8E8 782 aa20.28■□□□□ 0.84
SMG6-212ENST00000573153 ASB14A6NK59 587 aa20.27■□□□□ 0.84
SMG6-212ENST00000573153 E7EWF7 191 aa20.27■□□□□ 0.84
SMG6-212ENST00000573153 OPLAHO14841 1288 aa20.27■□□□□ 0.84
SMG6-212ENST00000573153 RPS6P62753 249 aaKnown RBP20.27■□□□□ 0.84
SMG6-212ENST00000573153 TLE2Q04725 743 aa20.27■□□□□ 0.84
SMG6-212ENST00000573153 CDC37Q16543 378 aaPredicted RBP20.27■□□□□ 0.84
SMG6-212ENST00000573153 ASPRV1Q53RT3 343 aa20.27■□□□□ 0.84
SMG6-212ENST00000573153 MB21D2Q8IYB1 491 aaPredicted RBP20.27■□□□□ 0.84
SMG6-212ENST00000573153 ADGRF4Q8IZF3 695 aa20.27■□□□□ 0.84
SMG6-212ENST00000573153 TBC1D5Q92609 795 aa20.27■□□□□ 0.84
SMG6-212ENST00000573153 JMJD4Q9H9V9 463 aa20.27■□□□□ 0.84
SMG6-212ENST00000573153 MOXD2PA6NHM9 499 aa20.26■□□□□ 0.83
SMG6-212ENST00000573153 PPP1R11O60927 126 aaPredicted RBP20.26■□□□□ 0.83
SMG6-212ENST00000573153 CDK7P50613 346 aa20.26■□□□□ 0.83
SMG6-212ENST00000573153 LRIT3Q3SXY7 679 aa20.26■□□□□ 0.83
SMG6-212ENST00000573153 TDHQ8IZJ6 230 aa20.26■□□□□ 0.83
SMG6-212ENST00000573153 COL20A1Q9P218 1284 aa20.26■□□□□ 0.83
SMG6-212ENST00000573153 MAD2L2Q9UI95 211 aa20.26■□□□□ 0.83
SMG6-212ENST00000573153 U3KPZ7 1027 aaPredicted RBP20.26■□□□□ 0.83
SMG6-212ENST00000573153 RBM47A0AV96 593 aaKnown RBP20.25■□□□□ 0.83
SMG6-212ENST00000573153 PALM3A6NDB9 673 aaPredicted RBP20.25■□□□□ 0.83
SMG6-212ENST00000573153 QRICH1Q2TAL8 776 aa20.25■□□□□ 0.83
SMG6-212ENST00000573153 ANKRD33Q7Z3H0 272 aa20.25■□□□□ 0.83
SMG6-212ENST00000573153 RBM8AQ9Y5S9 174 aaKnown RBP20.25■□□□□ 0.83
SMG6-212ENST00000573153 LOC102724159A0A0B4J2E5 919 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 ASGR1P07306 291 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 C6orf222P0C671 652 aaPredicted RBP20.24■□□□□ 0.83
SMG6-212ENST00000573153 BEX3Q00994 111 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 GHRHRQ02643 423 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 TNFAIP2Q03169 654 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 FAAP100Q0VG06 881 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 TROAPQ12815 778 aa20.24■□□□□ 0.83
SMG6-212ENST00000573153 PWP2Q15269 919 aaKnown RBP20.24■□□□□ 0.83
SMG6-212ENST00000573153 IFIT1BQ5T764 474 aaKnown RBP20.24■□□□□ 0.83
SMG6-212ENST00000573153 RNF207Q6ZRF8 634 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms