RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 SGTAO43765 313 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 MSNP26038 577 aaKnown RBP10.04□□□□□ -0.8
TVP23A-205ENST00000572428 BPIFB3P59826 476 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 NMIQ13287 307 aaPredicted RBP10.04□□□□□ -0.8
TVP23A-205ENST00000572428 ZSCAN25Q6NSZ9 544 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 PI16Q6UXB8 463 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 PDCL2Q8N4E4 241 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 MYRIPQ8NFW9 859 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 ASIC4Q96FT7 647 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 BEGAINQ9BUH8 593 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 COA1Q9GZY4 146 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 C6orf203Q9P0P8 240 aaPredicted RBP10.04□□□□□ -0.8
TVP23A-205ENST00000572428 KIF11P52732 1056 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 HSD17B7P56937 341 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 TAF1CQ15572 869 aaPredicted RBP10.04□□□□□ -0.8
TVP23A-205ENST00000572428 GSDMBQ8TAX9 411 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 CD209Q9NNX6 404 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 AVENQ9NQS1 362 aaPredicted RBP10.04□□□□□ -0.8
TVP23A-205ENST00000572428 LCMT1Q9UIC8 334 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 CFAP45Q9UL16 551 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 SNX14Q9Y5W7 946 aa10.04□□□□□ -0.8
TVP23A-205ENST00000572428 A0A0D9SFI3 127 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 PSDA5PKW4 1024 aaPredicted RBP10.03□□□□□ -0.8
TVP23A-205ENST00000572428 INMTO95050 263 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 BAG4O95429 457 aaKnown RBP10.03□□□□□ -0.8
TVP23A-205ENST00000572428 FKBP1AP62942 108 aaKnown RBP10.03□□□□□ -0.8
TVP23A-205ENST00000572428 FKBP4Q02790 459 aaKnown RBP eCLIP10.03□□□□□ -0.8
TVP23A-205ENST00000572428 RTKN2Q8IZC4 609 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 SUPT20HQ8NEM7 779 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 GSDMAQ96QA5 445 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 EYA3Q99504 573 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.03□□□□□ -0.8
TVP23A-205ENST00000572428 AASDHPPTQ9NRN7 309 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 PIM2Q9P1W9 311 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 PRC1O43663 620 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 SNUPNO95149 360 aaKnown RBP10.03□□□□□ -0.8
TVP23A-205ENST00000572428 ADCY1Q08828 1119 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 MCMDC2Q4G0Z9 681 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 DPP8Q6V1X1 898 aaPredicted RBP10.03□□□□□ -0.8
TVP23A-205ENST00000572428 ZNF713Q8N859 430 aaPredicted RBP10.03□□□□□ -0.8
TVP23A-205ENST00000572428 IWS1Q96ST2 819 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 ATP8A1Q9Y2Q0 1164 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 MRFAP1Q9Y605 127 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 COL4A5P29400 1685 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 NAV1Q8NEY1 1877 aa10.03□□□□□ -0.8
TVP23A-205ENST00000572428 LTBP3Q9NS15 1303 aa10.02□□□□□ -0.8
TVP23A-205ENST00000572428 A0A0G2JLW4 131 aa10.02□□□□□ -0.8
TVP23A-205ENST00000572428 GUCY1B3Q02153 619 aa10.02□□□□□ -0.8
TVP23A-205ENST00000572428 APPBP2Q92624 585 aa10.02□□□□□ -0.8
TVP23A-205ENST00000572428 RMDN2Q96LZ7 410 aa10.02□□□□□ -0.8
TVP23A-205ENST00000572428 FAM227BQ96M60 508 aa10.02□□□□□ -0.8
TVP23A-205ENST00000572428 GRPEL1Q9HAV7 217 aa10.02□□□□□ -0.8
TVP23A-205ENST00000572428 SPON1Q9HCB6 807 aa10.02□□□□□ -0.8
TVP23A-205ENST00000572428 RNF19AQ9NV58 838 aa10.02□□□□□ -0.8
TVP23A-205ENST00000572428 EXOC1Q9NV70 894 aa10.02□□□□□ -0.8
TVP23A-205ENST00000572428 DDX56Q9NY93 547 aaKnown RBP10.02□□□□□ -0.8
TVP23A-205ENST00000572428 CCDC171Q6TFL3 1326 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 MSL3P1P0C860 447 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 GLULP15104 373 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 SLMAPQ14BN4 828 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 DBN1Q16643 649 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 FILIP1LQ4L180 1135 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 ZGPATQ8N5A5 531 aaKnown RBP10.02□□□□□ -0.81
TVP23A-205ENST00000572428 RNF214Q8ND24 703 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 MAP4K1Q92918 833 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 NAP1L4Q99733 375 aaKnown RBP10.02□□□□□ -0.81
TVP23A-205ENST00000572428 ABL1P00519 1130 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 HARSP12081 509 aaKnown RBP10.02□□□□□ -0.81
TVP23A-205ENST00000572428 ZKSCAN1P17029 563 aaPredicted RBP10.02□□□□□ -0.81
TVP23A-205ENST00000572428 BTF3P20290 206 aaKnown RBP10.02□□□□□ -0.81
TVP23A-205ENST00000572428 OAS2P29728 719 aaKnown RBP10.02□□□□□ -0.81
TVP23A-205ENST00000572428 MAN1A1P33908 653 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 RCAN1P53805 252 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 TAF11Q15544 211 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 MAPRE1Q15691 268 aaKnown RBP10.02□□□□□ -0.81
TVP23A-205ENST00000572428 ODR4Q5SWX8 454 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 CFAP58Q5T655 872 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 PHLDB3Q6NSJ2 640 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 OLFM4Q6UX06 510 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 SYT10Q6XYQ8 523 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 C3orf20Q8ND61 904 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 WDR66Q8TBY9 1149 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 GPT2Q8TD30 523 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 TMC2Q8TDI7 906 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 SYAP1Q96A49 352 aaPredicted RBP10.02□□□□□ -0.81
TVP23A-205ENST00000572428 TTC14Q96N46 770 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 MRGBPQ9NV56 204 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 CNPY2Q9Y2B0 182 aa10.02□□□□□ -0.81
TVP23A-205ENST00000572428 ADAMTSL1Q8N6G6 1762 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 ZMYM6O95789 1325 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 GNAT2P19087 354 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 SH3BGRP55822 239 aaPredicted RBP10.01□□□□□ -0.81
TVP23A-205ENST00000572428 MYBPC3Q14896 1274 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 KRT72Q14CN4 511 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 NOP9Q86U38 636 aaKnown RBP10.01□□□□□ -0.81
TVP23A-205ENST00000572428 STK11IPQ8N1F8 1099 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 RABGGTAQ92696 567 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 MAST3O60307 1309 aa10.01□□□□□ -0.81
TVP23A-205ENST00000572428 ZNF189O75820 626 aaPredicted RBP10.01□□□□□ -0.81
TVP23A-205ENST00000572428 PDE6AP16499 860 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms