RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 SEC23AQ15436 765 aa20.79■□□□□ 0.92
CTDNEP1-207ENST00000572043 CDC37Q16543 378 aaPredicted RBP20.79■□□□□ 0.92
CTDNEP1-207ENST00000572043 ASPRV1Q53RT3 343 aa20.79■□□□□ 0.92
CTDNEP1-207ENST00000572043 EEPD1Q7L9B9 569 aa20.79■□□□□ 0.92
CTDNEP1-207ENST00000572043 NCOA7Q8NI08 942 aa20.79■□□□□ 0.92
CTDNEP1-207ENST00000572043 LSG1Q9H089 658 aaKnown RBP20.79■□□□□ 0.92
CTDNEP1-207ENST00000572043 ABHD16BQ9H3Z7 469 aa20.79■□□□□ 0.92
CTDNEP1-207ENST00000572043 ASTN1O14525 1302 aa20.78■□□□□ 0.92
CTDNEP1-207ENST00000572043 CALML3P27482 149 aa20.78■□□□□ 0.92
CTDNEP1-207ENST00000572043 IRX5P78411 483 aaPredicted RBP20.78■□□□□ 0.92
CTDNEP1-207ENST00000572043 CCDC144BQ3MJ40 725 aa20.78■□□□□ 0.92
CTDNEP1-207ENST00000572043 BMP2KLQ5H9B9 411 aa20.78■□□□□ 0.92
CTDNEP1-207ENST00000572043 SLC30A10Q6XR72 485 aa20.78■□□□□ 0.92
CTDNEP1-207ENST00000572043 RNF180Q86T96 592 aa20.78■□□□□ 0.92
CTDNEP1-207ENST00000572043 ADGRF4Q8IZF3 695 aa20.78■□□□□ 0.92
CTDNEP1-207ENST00000572043 STAG2Q8N3U4 1231 aa20.78■□□□□ 0.92
CTDNEP1-207ENST00000572043 CLEC4DQ8WXI8 215 aa20.78■□□□□ 0.92
CTDNEP1-207ENST00000572043 SENP2Q9HC62 589 aa20.78■□□□□ 0.92
CTDNEP1-207ENST00000572043 ANO2Q9NQ90 1003 aa20.78■□□□□ 0.92
CTDNEP1-207ENST00000572043 ERICH2A1L162 156 aa20.77■□□□□ 0.92
CTDNEP1-207ENST00000572043 ASB14A6NK59 587 aa20.77■□□□□ 0.92
CTDNEP1-207ENST00000572043 ADCY6O43306 1168 aa20.77■□□□□ 0.92
CTDNEP1-207ENST00000572043 RTP1P59025 263 aa20.77■□□□□ 0.92
CTDNEP1-207ENST00000572043 NOL8Q76FK4 1167 aaKnown RBP20.77■□□□□ 0.92
CTDNEP1-207ENST00000572043 ATP11BQ9Y2G3 1177 aa20.77■□□□□ 0.92
CTDNEP1-207ENST00000572043 SYNRGQ9UMZ2 1314 aa20.77■□□□□ 0.91
CTDNEP1-207ENST00000572043 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.76■□□□□ 0.91
CTDNEP1-207ENST00000572043 MYADML2A6NDP7 307 aa20.76■□□□□ 0.91
CTDNEP1-207ENST00000572043 ADAMTS4O75173 837 aa20.76■□□□□ 0.91
CTDNEP1-207ENST00000572043 SLC39A5Q6ZMH5 540 aa20.76■□□□□ 0.91
CTDNEP1-207ENST00000572043 RNF207Q6ZRF8 634 aa20.76■□□□□ 0.91
CTDNEP1-207ENST00000572043 FBXO16Q8IX29 292 aaPredicted RBP20.76■□□□□ 0.91
CTDNEP1-207ENST00000572043 KATNBL1Q9H079 304 aa20.76■□□□□ 0.91
CTDNEP1-207ENST00000572043 FRMPD3Q5JV73 1810 aa20.76■□□□□ 0.91
CTDNEP1-207ENST00000572043 WDR19Q8NEZ3 1342 aa20.76■□□□□ 0.91
CTDNEP1-207ENST00000572043 NEFLP07196 543 aa20.75■□□□□ 0.91
CTDNEP1-207ENST00000572043 PTGS1P23219 599 aa20.75■□□□□ 0.91
CTDNEP1-207ENST00000572043 ANTXR2P58335 489 aa20.75■□□□□ 0.91
CTDNEP1-207ENST00000572043 WTAPQ15007 396 aa20.75■□□□□ 0.91
CTDNEP1-207ENST00000572043 QRICH1Q2TAL8 776 aa20.75■□□□□ 0.91
CTDNEP1-207ENST00000572043 TRIM60Q495X7 471 aa20.75■□□□□ 0.91
CTDNEP1-207ENST00000572043 TMEM67Q5HYA8 995 aa20.75■□□□□ 0.91
CTDNEP1-207ENST00000572043 PNMA2Q9UL42 364 aa20.75■□□□□ 0.91
CTDNEP1-207ENST00000572043 SLC27A2O14975 620 aa20.74■□□□□ 0.91
CTDNEP1-207ENST00000572043 DUSP11O75319 330 aaKnown RBP20.74■□□□□ 0.91
CTDNEP1-207ENST00000572043 C6orf222P0C671 652 aaPredicted RBP20.74■□□□□ 0.91
CTDNEP1-207ENST00000572043 MAGEA10P43363 369 aaPredicted RBP20.74■□□□□ 0.91
CTDNEP1-207ENST00000572043 SART3Q15020 963 aaKnown RBP20.74■□□□□ 0.91
CTDNEP1-207ENST00000572043 MB21D2Q8IYB1 491 aaPredicted RBP20.74■□□□□ 0.91
CTDNEP1-207ENST00000572043 JMJD4Q9H9V9 463 aa20.74■□□□□ 0.91
CTDNEP1-207ENST00000572043 PDGFCQ9NRA1 345 aa20.74■□□□□ 0.91
CTDNEP1-207ENST00000572043 MAD2L2Q9UI95 211 aa20.74■□□□□ 0.91
CTDNEP1-207ENST00000572043 PLXNA1Q9UIW2 1896 aa20.74■□□□□ 0.91
CTDNEP1-207ENST00000572043 PHF24Q9UPV7 400 aa20.74■□□□□ 0.91
CTDNEP1-207ENST00000572043 ZNFX1Q9P2E3 1918 aaKnown RBP20.74■□□□□ 0.91
CTDNEP1-207ENST00000572043 A0A1W2PQ45 241 aaPredicted RBP20.73■□□□□ 0.91
CTDNEP1-207ENST00000572043 A0A1W2PQY0 241 aa20.73■□□□□ 0.91
CTDNEP1-207ENST00000572043 KLRF2D3W0D1 207 aa20.73■□□□□ 0.91
CTDNEP1-207ENST00000572043 ALDH5A1P51649 535 aaPredicted RBP20.73■□□□□ 0.91
CTDNEP1-207ENST00000572043 RPS6P62753 249 aaKnown RBP20.73■□□□□ 0.91
CTDNEP1-207ENST00000572043 TNFAIP2Q03169 654 aa20.73■□□□□ 0.91
CTDNEP1-207ENST00000572043 KCNA10Q16322 511 aa20.73■□□□□ 0.91
CTDNEP1-207ENST00000572043 CREB3L3Q68CJ9 461 aa20.73■□□□□ 0.91
CTDNEP1-207ENST00000572043 PRO3102Q9H379 93 aa20.73■□□□□ 0.91
CTDNEP1-207ENST00000572043 PRDM5Q9NQX1 630 aaPredicted RBP20.73■□□□□ 0.91
CTDNEP1-207ENST00000572043 GPHNQ9NQX3 736 aaPredicted RBP20.73■□□□□ 0.91
CTDNEP1-207ENST00000572043 ADD3Q9UEY8 706 aaKnown RBP20.73■□□□□ 0.91
CTDNEP1-207ENST00000572043 ALPK3Q96L96 1907 aa20.72■□□□□ 0.91
CTDNEP1-207ENST00000572043 MDM2Q00987 491 aaPredicted RBP20.72■□□□□ 0.91
CTDNEP1-207ENST00000572043 COL9A3Q14050 684 aaPredicted RBP20.72■□□□□ 0.91
CTDNEP1-207ENST00000572043 TMEM63BQ5T3F8 832 aa20.72■□□□□ 0.91
CTDNEP1-207ENST00000572043 CASC1Q6TDU7 716 aa20.72■□□□□ 0.91
CTDNEP1-207ENST00000572043 FBXO11Q86XK2 927 aa20.72■□□□□ 0.91
CTDNEP1-207ENST00000572043 KLHDC9Q8NEP7 349 aa20.72■□□□□ 0.91
CTDNEP1-207ENST00000572043 NUP133Q8WUM0 1156 aa20.72■□□□□ 0.91
CTDNEP1-207ENST00000572043 TBC1D5Q92609 795 aa20.72■□□□□ 0.91
CTDNEP1-207ENST00000572043 SPC25Q9HBM1 224 aa20.72■□□□□ 0.91
CTDNEP1-207ENST00000572043 PALM3A6NDB9 673 aaPredicted RBP20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 PRC1O43663 620 aa20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 CDC45O75419 566 aa20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 SLC34A2O95436 690 aa20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 SMPD1P17405 629 aa20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 FXR1P51114 621 aaKnown RBP eCLIP20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 ACLYP53396 1101 aa20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 BEX3Q00994 111 aa20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 GRM4Q14833 912 aa20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 CATIPQ7Z7H3 387 aa20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 HOMER1Q86YM7 354 aa20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 IGDCC4Q8TDY8 1250 aa20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 GDF15Q99988 308 aa20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 MYL10Q9BUA6 226 aa20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 ABCB11O95342 1321 aa20.71■□□□□ 0.91
CTDNEP1-207ENST00000572043 NECTIN1Q15223 517 aa20.7■□□□□ 0.9
CTDNEP1-207ENST00000572043 GNASQ5JWF2 1037 aa20.7■□□□□ 0.9
CTDNEP1-207ENST00000572043 TAPT1Q6NXT6 567 aa20.7■□□□□ 0.9
CTDNEP1-207ENST00000572043 STARD7Q9NQZ5 370 aa20.7■□□□□ 0.9
CTDNEP1-207ENST00000572043 PRKAG2Q9UGJ0 569 aa20.7■□□□□ 0.9
CTDNEP1-207ENST00000572043 DYNC1LI2O43237 492 aaPredicted RBP20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 PQBP1O60828 265 aaKnown RBP20.69■□□□□ 0.9
CTDNEP1-207ENST00000572043 GJA9P57773 515 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms