RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 USH1GQ495M9 461 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 PRAMEF19Q5SWL8 479 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 SLC30A10Q6XR72 485 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 RUFY3Q7L099 469 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 CATIPQ7Z7H3 387 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 HOMER1Q86YM7 354 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 CCAR1Q8IX12 1150 aaKnown RBP8.14□□□□□ -1.11
SMG6-209ENST00000571442 SLAIN1Q8ND83 568 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 PXYLP1Q8TE99 480 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 APBA2Q99767 749 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 SLC12A7Q9Y666 1083 aa8.14□□□□□ -1.11
SMG6-209ENST00000571442 STRNO43815 780 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 PPFIA3O75145 1194 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 LARGE1O95461 756 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 HMGCRP04035 888 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 FDX1P10109 184 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 XRCC5P13010 732 aaKnown RBP8.13□□□□□ -1.11
SMG6-209ENST00000571442 CCL5P13501 91 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 CCND3P30281 292 aaPredicted RBP8.13□□□□□ -1.11
SMG6-209ENST00000571442 ADD1P35611 737 aaKnown RBP8.13□□□□□ -1.11
SMG6-209ENST00000571442 CACNB2Q08289 660 aaPredicted RBP8.13□□□□□ -1.11
SMG6-209ENST00000571442 MAP3K21Q5TCX8 1036 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 TMTC3Q6ZXV5 915 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 DPP9Q86TI2 863 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 ABRAQ8N0Z2 381 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 FBXL16Q8N461 479 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 CCDC82Q8N4S0 544 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 FAM133AQ8N9E0 248 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 FANCBQ8NB91 859 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 CHST13Q8NET6 341 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 SHISA4Q96DD7 197 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 MAML3Q96JK9 1138 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 MAP3K14Q99558 947 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 TM6SF1Q9BZW5 370 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 ACAD9Q9H845 621 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 CWC22Q9HCG8 908 aaKnown RBP8.13□□□□□ -1.11
SMG6-209ENST00000571442 COL20A1Q9P218 1284 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 CTDP1Q9Y5B0 961 aaPredicted RBP8.13□□□□□ -1.11
SMG6-209ENST00000571442 IVNS1ABPQ9Y6Y0 642 aa8.13□□□□□ -1.11
SMG6-209ENST00000571442 NID2Q14112 1375 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 GOLGA8AA7E2F4 631 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 GOLGA8BA8MQT2 603 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 ZBTB5O15062 677 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 ADAMTS3O15072 1205 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 ZBTB43O43298 467 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 DHX16O60231 1041 aaKnown RBP8.12□□□□□ -1.11
SMG6-209ENST00000571442 SNAI1O95863 264 aaPredicted RBP8.12□□□□□ -1.11
SMG6-209ENST00000571442 HMGB1P09429 215 aaKnown RBP8.12□□□□□ -1.11
SMG6-209ENST00000571442 PRKAR2AP13861 404 aaKnown RBP8.12□□□□□ -1.11
SMG6-209ENST00000571442 EN2P19622 333 aaPredicted RBP8.12□□□□□ -1.11
SMG6-209ENST00000571442 PTGS1P23219 599 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 PSMA5P28066 241 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 PDIA3P30101 505 aaKnown RBP8.12□□□□□ -1.11
SMG6-209ENST00000571442 EVCP57679 992 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 CCT2P78371 535 aaKnown RBP8.12□□□□□ -1.11
SMG6-209ENST00000571442 ST3GAL1Q11201 340 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 BAATQ14032 418 aaPredicted RBP8.12□□□□□ -1.11
SMG6-209ENST00000571442 KCTD2Q14681 263 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 NTRK3Q16288 839 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 TKFCQ3LXA3 575 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 TYW1BQ6NUM6 668 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 NSMFQ6X4W1 530 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 TMTC2Q8N394 836 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 CTCFLQ8NI51 663 aaPredicted RBP8.12□□□□□ -1.11
SMG6-209ENST00000571442 SPZ1Q9BXG8 430 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 NCOA5Q9HCD5 579 aaKnown RBP8.12□□□□□ -1.11
SMG6-209ENST00000571442 PDRG1Q9NUG6 133 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 CYP39A1Q9NYL5 469 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 CYP46A1Q9Y6A2 500 aa8.12□□□□□ -1.11
SMG6-209ENST00000571442 ADCY6O43306 1168 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 CYBAP13498 195 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 COPB2P35606 906 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 MNX1P50219 401 aaPredicted RBP8.11□□□□□ -1.11
SMG6-209ENST00000571442 AK2P54819 239 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 ANAPC15P60006 121 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 RPS6P62753 249 aaKnown RBP8.11□□□□□ -1.11
SMG6-209ENST00000571442 IRX5P78411 483 aaPredicted RBP8.11□□□□□ -1.11
SMG6-209ENST00000571442 RTN1Q16799 776 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 TMEM63BQ5T3F8 832 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 ANO1Q5XXA6 986 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 OLFML2BQ68BL8 750 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 NOL8Q76FK4 1167 aaKnown RBP8.11□□□□□ -1.11
SMG6-209ENST00000571442 FBXO11Q86XK2 927 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 ANKRD35Q8N283 1001 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 GPKOWQ92917 476 aaPredicted RBP eCLIP8.11□□□□□ -1.11
SMG6-209ENST00000571442 LENG1Q96BZ8 264 aaPredicted RBP8.11□□□□□ -1.11
SMG6-209ENST00000571442 DDX11Q96FC9 970 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 KATNBL1Q9H079 304 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMG6-209ENST00000571442 PAK6Q9NQU5 681 aaPredicted RBP8.11□□□□□ -1.11
SMG6-209ENST00000571442 BIN2Q9UBW5 565 aaPredicted RBP8.11□□□□□ -1.11
SMG6-209ENST00000571442 FBXO40Q9UH90 709 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 TPCN1Q9ULQ1 816 aa8.11□□□□□ -1.11
SMG6-209ENST00000571442 NAP1L2Q9ULW6 460 aaPredicted RBP8.11□□□□□ -1.11
SMG6-209ENST00000571442 MKI67P46013 3256 aaKnown RBP8.11□□□□□ -1.11
SMG6-209ENST00000571442 ABCB11O95342 1321 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 RPTORQ8N122 1335 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 PNMA6FA0A0J9YX94 578 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 PTPDC1A2A3K4 754 aa8.1□□□□□ -1.11
SMG6-209ENST00000571442 POTEB2H3BUK9 544 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms