RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 CCDC158Q5M9N0 1113 aa8.74□□□□□ -1.01
SMG6-205ENST00000570659 ZNF467Q7Z7K2 595 aaPredicted RBP8.74□□□□□ -1.01
SMG6-205ENST00000570659 SSH3Q8TE77 659 aa8.74□□□□□ -1.01
SMG6-205ENST00000570659 CLUAP1Q96AJ1 413 aa8.74□□□□□ -1.01
SMG6-205ENST00000570659 OSBPL7Q9BZF2 842 aa8.74□□□□□ -1.01
SMG6-205ENST00000570659 MYO15AQ9UKN7 3530 aa8.74□□□□□ -1.01
SMG6-205ENST00000570659 MYH4Q9Y623 1939 aa8.74□□□□□ -1.01
SMG6-205ENST00000570659 GRXCR2A6NFK2 248 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 E9PSI1 815 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 GTPBP6O43824 516 aaPredicted RBP8.73□□□□□ -1.01
SMG6-205ENST00000570659 RAD21O60216 631 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 ARP10275 920 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 SSTR3P32745 418 aaPredicted RBP8.73□□□□□ -1.01
SMG6-205ENST00000570659 TCF15Q12870 199 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 LEXMQ3ZCV2 418 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 MUM1L1Q5H9M0 696 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 C12orf60Q5U649 245 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 PTCRAQ6ISU1 281 aaPredicted RBP8.73□□□□□ -1.01
SMG6-205ENST00000570659 CCDC174Q6PII3 467 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.73□□□□□ -1.01
SMG6-205ENST00000570659 MSL3Q8N5Y2 521 aaKnown RBP8.73□□□□□ -1.01
SMG6-205ENST00000570659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.73□□□□□ -1.01
SMG6-205ENST00000570659 DHX38Q92620 1227 aaKnown RBP8.73□□□□□ -1.01
SMG6-205ENST00000570659 WNT8BQ93098 351 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 DDX11Q96FC9 970 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 SLF1Q9BQI6 1058 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 C17orf80Q9BSJ5 609 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 TEX13BQ9BXU2 312 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 API5Q9BZZ5 524 aaKnown RBP8.73□□□□□ -1.01
SMG6-205ENST00000570659 ABHD16BQ9H3Z7 469 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 A1CFQ9NQ94 594 aaKnown RBP8.73□□□□□ -1.01
SMG6-205ENST00000570659 ZFHX2Q9C0A1 2572 aaPredicted RBP8.73□□□□□ -1.01
SMG6-205ENST00000570659 ZDBF2Q9HCK1 2354 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 TNKSO95271 1327 aa8.73□□□□□ -1.01
SMG6-205ENST00000570659 COL4A6Q14031 1691 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 LINC01553A4QN01 128 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 USP17L12C9JPN9 530 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 USP17L21D6R901 530 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 SURF6O75683 361 aaKnown RBP8.72□□□□□ -1.01
SMG6-205ENST00000570659 MBD4O95243 580 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 GNAI2P04899 355 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 GNAI3P08754 354 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 IQCF3P0C7M6 154 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 IRS1P35568 1242 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 WDR5P61964 334 aaKnown RBP8.72□□□□□ -1.01
SMG6-205ENST00000570659 ZP2Q05996 745 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 DLX2Q07687 328 aaPredicted RBP8.72□□□□□ -1.01
SMG6-205ENST00000570659 SLC9C2Q5TAH2 1124 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 C16orf86Q6ZW13 317 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 TMEM57Q8N5G2 664 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 COPS5Q92905 334 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 SLC38A10Q9HBR0 1119 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 ARHGEF10LQ9HCE6 1279 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 MUTYHQ9UIF7 546 aa8.72□□□□□ -1.01
SMG6-205ENST00000570659 IGKV6D-41A0A0C4DH26 115 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 C19orf67A6NJJ6 358 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 F5H6K3 240 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 ATP2A1O14983 1001 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 DCXO43602 365 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 NBNO60934 754 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 RLBP1P12271 317 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 RASA1P20936 1047 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 LTBRP36941 435 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 ATP8B2P98198 1209 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 PURAQ00577 322 aaKnown RBP8.71□□□□□ -1.02
SMG6-205ENST00000570659 KLRC3Q07444 240 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 HIC1Q14526 733 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 MBTPS1Q14703 1052 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 NBPF20Q3BBV1 942 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 FAM117BQ6P1L5 589 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 CTR9Q6PD62 1173 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 TRAF7Q6Q0C0 670 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 NOL8Q76FK4 1167 aaKnown RBP8.71□□□□□ -1.02
SMG6-205ENST00000570659 NEK9Q8TD19 979 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 KIFC2Q96AC6 838 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 SLC9A7Q96T83 725 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 MTIF3Q9H2K0 278 aaKnown RBP8.71□□□□□ -1.02
SMG6-205ENST00000570659 IL1RAPL2Q9NP60 686 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 EXOC6BQ9Y2D4 811 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 NOP58Q9Y2X3 529 aaKnown RBP8.71□□□□□ -1.02
SMG6-205ENST00000570659 ZBED9Q6R2W3 1325 aa8.71□□□□□ -1.02
SMG6-205ENST00000570659 DMDP11532 3685 aa8.7□□□□□ -1.02
SMG6-205ENST00000570659 GOLIM4O00461 696 aa8.7□□□□□ -1.02
SMG6-205ENST00000570659 GTF2F1P35269 517 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMG6-205ENST00000570659 MKRN4PQ13434 485 aaPredicted RBP8.7□□□□□ -1.02
SMG6-205ENST00000570659 CLUL1Q15846 466 aa8.7□□□□□ -1.02
SMG6-205ENST00000570659 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMG6-205ENST00000570659 RPUSD2Q8IZ73 545 aaKnown RBP8.7□□□□□ -1.02
SMG6-205ENST00000570659 LRRC47Q8N1G4 583 aaKnown RBP8.7□□□□□ -1.02
SMG6-205ENST00000570659 ANKRD35Q8N283 1001 aa8.7□□□□□ -1.02
SMG6-205ENST00000570659 CRNKL1Q9BZJ0 848 aaKnown RBP8.7□□□□□ -1.02
SMG6-205ENST00000570659 CACNA1HO95180 2353 aa8.69□□□□□ -1.02
SMG6-205ENST00000570659 VPS13AQ96RL7 3174 aa8.69□□□□□ -1.02
SMG6-205ENST00000570659 LGR5O75473 907 aa8.69□□□□□ -1.02
SMG6-205ENST00000570659 PRDM1O75626 825 aa8.69□□□□□ -1.02
SMG6-205ENST00000570659 ARIH2O95376 493 aa8.69□□□□□ -1.02
SMG6-205ENST00000570659 MYL3P08590 195 aa8.69□□□□□ -1.02
SMG6-205ENST00000570659 VCPP55072 806 aaKnown RBP8.69□□□□□ -1.02
SMG6-205ENST00000570659 ERVK-21P61565 698 aa8.69□□□□□ -1.02
SMG6-205ENST00000570659 OS9Q13438 667 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms