RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 KDM4AO75164 1064 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 PDHBP11177 359 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 NOVP48745 357 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 MUM1L1Q5H9M0 696 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 GPR153Q6NV75 609 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 BTNL9Q6UXG8 535 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 TBC1D10CQ8IV04 446 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 DEFB123Q8N688 67 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 KLHDC9Q8NEP7 349 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 BADQ92934 168 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 DSCC1Q9BVC3 393 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 KRT23Q9C075 422 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 KAT14Q9H8E8 782 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 PDLIM7Q9NR12 457 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 CYP39A1Q9NYL5 469 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 MROH7Q68CQ1 1323 aa10.48□□□□□ -0.73
NPLOC4-204ENST00000570324 B4DLN1 442 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 B4E1Z4 1266 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 TLR3O15455 904 aaKnown RBP10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 ZEB2O60315 1214 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 ASGR1P07306 291 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 CALML3P27482 149 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 MRPL12P52815 198 aaKnown RBP10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 GJA9P57773 515 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 IRX6P78412 446 aaPredicted RBP10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 ZNF543Q08ER8 600 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 BAATQ14032 418 aaPredicted RBP10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 GPATCH4Q5T3I0 446 aaKnown RBP10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 IQSEC1Q6DN90 963 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 EEPD1Q7L9B9 569 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 SH3RF1Q7Z6J0 888 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 DGKHQ86XP1 1220 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 RUFY2Q8WXA3 655 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 FGD4Q96M96 766 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 ZSCAN10Q96SZ4 725 aaPredicted RBP10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 UBAC1Q9BSL1 405 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 CNNM2Q9H8M5 875 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 ELP1O95163 1332 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 NEDD4P46934 1319 aa10.47□□□□□ -0.73
NPLOC4-204ENST00000570324 MCM3APO60318 1980 aa10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 A0A0U1RQG5 324 aaPredicted RBP10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 TRIM43BA6NCK2 446 aa10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 MYADML2A6NDP7 307 aa10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 DYNC1LI2O43237 492 aaPredicted RBP10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 GOLGA8HP0CJ92 632 aa10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 CST5P28325 142 aaPredicted RBP10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 BEX3Q00994 111 aa10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 PDE4DQ08499 809 aa10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 TRDNQ13061 729 aa10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 RNF207Q6ZRF8 634 aa10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 KIAA1211Q6ZU35 1233 aa10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 PNMA1Q8ND90 353 aa10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 TRIM43Q96BQ3 446 aaPredicted RBP10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 TOX2Q96NM4 488 aa10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 UPF3AQ9H1J1 476 aaKnown RBP10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 VTA1Q9NP79 307 aa10.46□□□□□ -0.73
NPLOC4-204ENST00000570324 WDR19Q8NEZ3 1342 aa10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 NFIBO00712 420 aa10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 KIAA0355O15063 1070 aa10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 CABYRO75952 493 aa10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 IRX5P78411 483 aaPredicted RBP10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 FPGSQ05932 587 aa10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 SHHQ15465 462 aa10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 USH1GQ495M9 461 aa10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 TTC22Q5TAA0 569 aa10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 Q7L0L9 218 aa10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 TLK2Q86UE8 772 aa10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 FBXO16Q8IX29 292 aaPredicted RBP10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 UBA5Q9GZZ9 404 aa10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 KATNBL1Q9H079 304 aa10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 ZSWIM5Q9P217 1185 aa10.45□□□□□ -0.74
NPLOC4-204ENST00000570324 TNKSO95271 1327 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 LOC102724159A0A0B4J2E5 919 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 ERICH2A1L162 156 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 ARVCFO00192 962 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 ADCY6O43306 1168 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 PARP1P09874 1014 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 SNHG28P0DPA3 235 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 SMPD1P17405 629 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 ALDH5A1P51649 535 aaPredicted RBP10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 FAAP100Q0VG06 881 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 PWP2Q15269 919 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 FSCN1Q16658 493 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 ASPRV1Q53RT3 343 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 BRDTQ58F21 947 aaPredicted RBP10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 IFIT1BQ5T764 474 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 ZNF697Q5TEC3 545 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 CCSAPQ6IQ19 270 aaPredicted RBP10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 CXCL17Q6UXB2 119 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 ANKRD33Q7Z3H0 272 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 RNPC3Q96LT9 517 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 PURBQ96QR8 312 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 WDR11Q9BZH6 1224 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 VAT1LQ9HCJ6 419 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 GPHNQ9NQX3 736 aaPredicted RBP10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 PDGFCQ9NRA1 345 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 Q9Y3F1 56 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 LTBP2Q14767 1821 aa10.44□□□□□ -0.74
NPLOC4-204ENST00000570324 LAMA4Q16363 1823 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms