RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 GJA9P57773 515 aa20.06■□□□□ 0.8
MAP1LC3B-208ENST00000570189 CCDC144BQ3MJ40 725 aa20.06■□□□□ 0.8
MAP1LC3B-208ENST00000570189 UBE2OQ9C0C9 1292 aaKnown RBP20.06■□□□□ 0.8
MAP1LC3B-208ENST00000570189 ADCY6O43306 1168 aa20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 SLC16A2P36021 539 aa20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 TRIM60Q495X7 471 aa20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 PCSK9Q8NBP7 692 aaKnown RBP20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 PNMA1Q8ND90 353 aa20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 NUP133Q8WUM0 1156 aa20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 RUFY2Q8WXA3 655 aa20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 LENG1Q96BZ8 264 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 TOX2Q96NM4 488 aa20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 ZSCAN10Q96SZ4 725 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 PDLIM7Q9NR12 457 aa20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 ZSWIM5Q9P217 1185 aa20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 PRKAG2Q9UGJ0 569 aa20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 ATP11BQ9Y2G3 1177 aa20.05■□□□□ 0.8
MAP1LC3B-208ENST00000570189 ELP1O95163 1332 aa20.04■□□□□ 0.8
MAP1LC3B-208ENST00000570189 FRMPD2Q68DX3 1309 aaPredicted RBP20.04■□□□□ 0.8
MAP1LC3B-208ENST00000570189 B4E1Z4 1266 aa20.04■□□□□ 0.8
MAP1LC3B-208ENST00000570189 SOX1O00570 391 aaPredicted RBP20.04■□□□□ 0.8
MAP1LC3B-208ENST00000570189 CHMLP26374 656 aa20.04■□□□□ 0.8
MAP1LC3B-208ENST00000570189 ACLYP53396 1101 aa20.04■□□□□ 0.8
MAP1LC3B-208ENST00000570189 SNAP25P60880 206 aa20.04■□□□□ 0.8
MAP1LC3B-208ENST00000570189 ANKRD33Q7Z3H0 272 aa20.04■□□□□ 0.8
MAP1LC3B-208ENST00000570189 ENAHQ8N8S7 591 aaPredicted RBP20.04■□□□□ 0.8
MAP1LC3B-208ENST00000570189 RGS22Q8NE09 1264 aa20.04■□□□□ 0.8
MAP1LC3B-208ENST00000570189 CHMP4CQ96CF2 233 aa20.04■□□□□ 0.8
MAP1LC3B-208ENST00000570189 GPCPD1Q9NPB8 672 aa20.04■□□□□ 0.8
MAP1LC3B-208ENST00000570189 MTMR7Q9Y216 660 aa20.04■□□□□ 0.8
MAP1LC3B-208ENST00000570189 ASPRV1Q53RT3 343 aa20.03■□□□□ 0.8
MAP1LC3B-208ENST00000570189 CLEC4DQ8WXI8 215 aa20.03■□□□□ 0.8
MAP1LC3B-208ENST00000570189 FERMT2Q96AC1 680 aa20.03■□□□□ 0.8
MAP1LC3B-208ENST00000570189 LBHD1Q9BQE6 289 aaPredicted RBP20.03■□□□□ 0.8
MAP1LC3B-208ENST00000570189 ZKSCAN3Q9BRR0 538 aa20.03■□□□□ 0.8
MAP1LC3B-208ENST00000570189 SPC25Q9HBM1 224 aa20.03■□□□□ 0.8
MAP1LC3B-208ENST00000570189 VTA1Q9NP79 307 aa20.03■□□□□ 0.8
MAP1LC3B-208ENST00000570189 ADD3Q9UEY8 706 aaKnown RBP20.03■□□□□ 0.8
MAP1LC3B-208ENST00000570189 GNEQ9Y223 722 aaKnown RBP20.03■□□□□ 0.8
MAP1LC3B-208ENST00000570189 Q9Y3F1 56 aa20.03■□□□□ 0.8
MAP1LC3B-208ENST00000570189 CTAGE5O15320 804 aa20.02■□□□□ 0.8
MAP1LC3B-208ENST00000570189 MDM2Q00987 491 aaPredicted RBP20.02■□□□□ 0.8
MAP1LC3B-208ENST00000570189 KCNA10Q16322 511 aa20.02■□□□□ 0.8
MAP1LC3B-208ENST00000570189 NSMFQ6X4W1 530 aa20.02■□□□□ 0.8
MAP1LC3B-208ENST00000570189 KAT14Q9H8E8 782 aa20.02■□□□□ 0.8
MAP1LC3B-208ENST00000570189 LAMA2P24043 3122 aaKnown RBP20.02■□□□□ 0.79
MAP1LC3B-208ENST00000570189 TNKSO95271 1327 aa20.02■□□□□ 0.79
MAP1LC3B-208ENST00000570189 NFIBO00712 420 aa20.01■□□□□ 0.79
MAP1LC3B-208ENST00000570189 KIAA0355O15063 1070 aa20.01■□□□□ 0.79
MAP1LC3B-208ENST00000570189 SGSM2O43147 1006 aa20.01■□□□□ 0.79
MAP1LC3B-208ENST00000570189 MYCNP04198 464 aaPredicted RBP20.01■□□□□ 0.79
MAP1LC3B-208ENST00000570189 IRX6P78412 446 aaPredicted RBP20.01■□□□□ 0.79
MAP1LC3B-208ENST00000570189 TNFAIP2Q03169 654 aa20.01■□□□□ 0.79
MAP1LC3B-208ENST00000570189 TLE2Q04725 743 aa20.01■□□□□ 0.79
MAP1LC3B-208ENST00000570189 SEC23AQ15436 765 aa20.01■□□□□ 0.79
MAP1LC3B-208ENST00000570189 IQSEC1Q6DN90 963 aa20.01■□□□□ 0.79
MAP1LC3B-208ENST00000570189 TAPT1Q6NXT6 567 aa20.01■□□□□ 0.79
MAP1LC3B-208ENST00000570189 STARD7Q9NQZ5 370 aa20.01■□□□□ 0.79
MAP1LC3B-208ENST00000570189 MROH7Q68CQ1 1323 aa20.01■□□□□ 0.79
MAP1LC3B-208ENST00000570189 MYADML2A6NDP7 307 aa20■□□□□ 0.79
MAP1LC3B-208ENST00000570189 CLTBP09497 229 aa20■□□□□ 0.79
MAP1LC3B-208ENST00000570189 C6orf222P0C671 652 aaPredicted RBP20■□□□□ 0.79
MAP1LC3B-208ENST00000570189 ALDH5A1P51649 535 aaPredicted RBP20■□□□□ 0.79
MAP1LC3B-208ENST00000570189 BAATQ14032 418 aaPredicted RBP20■□□□□ 0.79
MAP1LC3B-208ENST00000570189 DNERQ8NFT8 737 aa20■□□□□ 0.79
MAP1LC3B-208ENST00000570189 UBAC1Q9BSL1 405 aa20■□□□□ 0.79
MAP1LC3B-208ENST00000570189 U3KPZ7 1027 aaPredicted RBP20■□□□□ 0.79
MAP1LC3B-208ENST00000570189 TRIM43BA6NCK2 446 aa19.99■□□□□ 0.79
MAP1LC3B-208ENST00000570189 ASGR1P07306 291 aa19.99■□□□□ 0.79
MAP1LC3B-208ENST00000570189 CYP21A2P08686 494 aa19.99■□□□□ 0.79
MAP1LC3B-208ENST00000570189 EDNRBP24530 442 aa19.99■□□□□ 0.79
MAP1LC3B-208ENST00000570189 CDK7P50613 346 aa19.99■□□□□ 0.79
MAP1LC3B-208ENST00000570189 TRIM43Q96BQ3 446 aaPredicted RBP19.99■□□□□ 0.79
MAP1LC3B-208ENST00000570189 LRCH3Q96II8 777 aa19.99■□□□□ 0.79
MAP1LC3B-208ENST00000570189 GLT1D1Q96MS3 346 aa19.99■□□□□ 0.79
MAP1LC3B-208ENST00000570189 SEZ6LQ9BYH1 1024 aa19.99■□□□□ 0.79
MAP1LC3B-208ENST00000570189 KIAA1217Q5T5P2 1943 aa19.98■□□□□ 0.79
MAP1LC3B-208ENST00000570189 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.98■□□□□ 0.79
MAP1LC3B-208ENST00000570189 RBM47A0AV96 593 aaKnown RBP19.98■□□□□ 0.79
MAP1LC3B-208ENST00000570189 GOLGA8HP0CJ92 632 aa19.98■□□□□ 0.79
MAP1LC3B-208ENST00000570189 GNASQ5JWF2 1037 aa19.98■□□□□ 0.79
MAP1LC3B-208ENST00000570189 RNF207Q6ZRF8 634 aa19.98■□□□□ 0.79
MAP1LC3B-208ENST00000570189 A0A0U1RQG5 324 aaPredicted RBP19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 PTPDC1A2A3K4 754 aa19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 CABYRO75952 493 aa19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 PARP1P09874 1014 aaKnown RBP19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 SMPD1P17405 629 aa19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 RPS6P62753 249 aaKnown RBP19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 PTH1RQ03431 593 aa19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 FAAP100Q0VG06 881 aa19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 TRDNQ13061 729 aa19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 CDC37Q16543 378 aaPredicted RBP19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 DUSP28Q4G0W2 176 aa19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 IFIT1BQ5T764 474 aaKnown RBP19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 SLC30A10Q6XR72 485 aa19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 SH3RF1Q7Z6J0 888 aa19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 TLK2Q86UE8 772 aa19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 ADGRF4Q8IZF3 695 aa19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 SLC43A3Q8NBI5 491 aa19.97■□□□□ 0.79
MAP1LC3B-208ENST00000570189 MAP4K1Q92918 833 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms