RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 SART3Q15020 963 aaKnown RBP15.22■□□□□ 0.03
CNOT1-220ENST00000569916 CDC37Q16543 378 aaPredicted RBP15.22■□□□□ 0.03
CNOT1-220ENST00000569916 CCDC144CPQ8IYA2 1237 aa15.22■□□□□ 0.03
CNOT1-220ENST00000569916 STAG2Q8N3U4 1231 aa15.22■□□□□ 0.03
CNOT1-220ENST00000569916 IGDCC4Q8TDY8 1250 aa15.22■□□□□ 0.03
CNOT1-220ENST00000569916 CLEC4DQ8WXI8 215 aa15.22■□□□□ 0.03
CNOT1-220ENST00000569916 KATNBL1Q9H079 304 aa15.22■□□□□ 0.03
CNOT1-220ENST00000569916 MAD2L2Q9UI95 211 aa15.22■□□□□ 0.03
CNOT1-220ENST00000569916 ZHX1Q9UKY1 873 aaPredicted RBP15.22■□□□□ 0.03
CNOT1-220ENST00000569916 RARBP10826 455 aa15.21■□□□□ 0.03
CNOT1-220ENST00000569916 BAATQ14032 418 aaPredicted RBP15.21■□□□□ 0.03
CNOT1-220ENST00000569916 GRM4Q14833 912 aa15.21■□□□□ 0.03
CNOT1-220ENST00000569916 TMEM67Q5HYA8 995 aa15.21■□□□□ 0.03
CNOT1-220ENST00000569916 GJC2Q5T442 439 aaPredicted RBP15.21■□□□□ 0.03
CNOT1-220ENST00000569916 ERICH6BQ5W0A0 696 aa15.21■□□□□ 0.03
CNOT1-220ENST00000569916 SLC30A10Q6XR72 485 aa15.21■□□□□ 0.03
CNOT1-220ENST00000569916 LENG1Q96BZ8 264 aaPredicted RBP15.21■□□□□ 0.03
CNOT1-220ENST00000569916 PURBQ96QR8 312 aaKnown RBP15.21■□□□□ 0.03
CNOT1-220ENST00000569916 JMJD4Q9H9V9 463 aa15.21■□□□□ 0.03
CNOT1-220ENST00000569916 LY9Q9HBG7 655 aa15.21■□□□□ 0.03
CNOT1-220ENST00000569916 XPNPEP3Q9NQH7 507 aa15.21■□□□□ 0.03
CNOT1-220ENST00000569916 PPP4R2Q9NY27 417 aa15.21■□□□□ 0.03
CNOT1-220ENST00000569916 PALM3A6NDB9 673 aaPredicted RBP15.2■□□□□ 0.02
CNOT1-220ENST00000569916 KLRF2D3W0D1 207 aa15.2■□□□□ 0.02
CNOT1-220ENST00000569916 PRC1O43663 620 aa15.2■□□□□ 0.02
CNOT1-220ENST00000569916 EVI5O60447 810 aa15.2■□□□□ 0.02
CNOT1-220ENST00000569916 TROAPQ12815 778 aa15.2■□□□□ 0.02
CNOT1-220ENST00000569916 ACVR2BQ13705 512 aa15.2■□□□□ 0.02
CNOT1-220ENST00000569916 LRRC41Q15345 812 aa15.2■□□□□ 0.02
CNOT1-220ENST00000569916 QRICH1Q2TAL8 776 aa15.2■□□□□ 0.02
CNOT1-220ENST00000569916 USH1GQ495M9 461 aa15.2■□□□□ 0.02
CNOT1-220ENST00000569916 ARRDC4Q8NCT1 418 aa15.2■□□□□ 0.02
CNOT1-220ENST00000569916 MTA3Q9BTC8 594 aa15.2■□□□□ 0.02
CNOT1-220ENST00000569916 ABHD16BQ9H3Z7 469 aa15.2■□□□□ 0.02
CNOT1-220ENST00000569916 GPHNQ9NQX3 736 aaPredicted RBP15.2■□□□□ 0.02
CNOT1-220ENST00000569916 NR2E3Q9Y5X4 410 aa15.2■□□□□ 0.02
CNOT1-220ENST00000569916 DDX49Q9Y6V7 483 aaKnown RBP15.2■□□□□ 0.02
CNOT1-220ENST00000569916 PTPDC1A2A3K4 754 aa15.19■□□□□ 0.02
CNOT1-220ENST00000569916 ASB14A6NK59 587 aa15.19■□□□□ 0.02
CNOT1-220ENST00000569916 ADCY6O43306 1168 aa15.19■□□□□ 0.02
CNOT1-220ENST00000569916 DHX16O60231 1041 aaKnown RBP15.19■□□□□ 0.02
CNOT1-220ENST00000569916 MCM5P33992 734 aa15.19■□□□□ 0.02
CNOT1-220ENST00000569916 LRRC26Q2I0M4 334 aa15.19■□□□□ 0.02
CNOT1-220ENST00000569916 SLC35G1Q2M3R5 365 aa15.19■□□□□ 0.02
CNOT1-220ENST00000569916 MTMR8Q96EF0 704 aa15.19■□□□□ 0.02
CNOT1-220ENST00000569916 VAT1LQ9HCJ6 419 aa15.19■□□□□ 0.02
CNOT1-220ENST00000569916 FAM184BQ9ULE4 1060 aa15.19■□□□□ 0.02
CNOT1-220ENST00000569916 ABCB11O95342 1321 aa15.18■□□□□ 0.02
CNOT1-220ENST00000569916 SYNRGQ9UMZ2 1314 aa15.18■□□□□ 0.02
CNOT1-220ENST00000569916 KBTBD13C9JR72 458 aa15.18■□□□□ 0.02
CNOT1-220ENST00000569916 SH2B2O14492 632 aaPredicted RBP15.18■□□□□ 0.02
CNOT1-220ENST00000569916 ADAMTS4O75173 837 aa15.18■□□□□ 0.02
CNOT1-220ENST00000569916 PGK1P00558 417 aa15.18■□□□□ 0.02
CNOT1-220ENST00000569916 ALDH5A1P51649 535 aaPredicted RBP15.18■□□□□ 0.02
CNOT1-220ENST00000569916 RPS6P62753 249 aaKnown RBP15.18■□□□□ 0.02
CNOT1-220ENST00000569916 CCDC144BQ3MJ40 725 aa15.18■□□□□ 0.02
CNOT1-220ENST00000569916 RNF20Q5VTR2 975 aa15.18■□□□□ 0.02
CNOT1-220ENST00000569916 RNF207Q6ZRF8 634 aa15.18■□□□□ 0.02
CNOT1-220ENST00000569916 CATIPQ7Z7H3 387 aa15.18■□□□□ 0.02
CNOT1-220ENST00000569916 C7orf61Q8IZ16 206 aa15.18■□□□□ 0.02
CNOT1-220ENST00000569916 MORC4Q8TE76 937 aa15.18■□□□□ 0.02
CNOT1-220ENST00000569916 TMEM87BQ96K49 555 aa15.18■□□□□ 0.02
CNOT1-220ENST00000569916 SENP6Q9GZR1 1112 aaPredicted RBP15.18■□□□□ 0.02
CNOT1-220ENST00000569916 CEP290O15078 2479 aa15.18■□□□□ 0.02
CNOT1-220ENST00000569916 LTBP2Q14767 1821 aa15.17■□□□□ 0.02
CNOT1-220ENST00000569916 BAZ2BQ9UIF8 2168 aaKnown RBP15.17■□□□□ 0.02
CNOT1-220ENST00000569916 PPP1R11O60927 126 aaPredicted RBP15.17■□□□□ 0.02
CNOT1-220ENST00000569916 DUSP11O75319 330 aaKnown RBP15.17■□□□□ 0.02
CNOT1-220ENST00000569916 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
CNOT1-220ENST00000569916 CALML3P27482 149 aa15.17■□□□□ 0.02
CNOT1-220ENST00000569916 FBXO11Q86XK2 927 aa15.17■□□□□ 0.02
CNOT1-220ENST00000569916 RASEFQ8IZ41 740 aa15.17■□□□□ 0.02
CNOT1-220ENST00000569916 ZNF654Q8IZM8 581 aa15.17■□□□□ 0.02
CNOT1-220ENST00000569916 MYL10Q9BUA6 226 aa15.17■□□□□ 0.02
CNOT1-220ENST00000569916 RIOX1Q9H6W3 641 aa15.17■□□□□ 0.02
CNOT1-220ENST00000569916 ADD3Q9UEY8 706 aaKnown RBP15.17■□□□□ 0.02
CNOT1-220ENST00000569916 KIAA1217Q5T5P2 1943 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 LOC102724159A0A0B4J2E5 919 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.16■□□□□ 0.02
CNOT1-220ENST00000569916 ZBTB5O15062 677 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 CYTH3O43739 400 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 DDAH1O94760 285 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 PWP2Q15269 919 aaKnown RBP15.16■□□□□ 0.02
CNOT1-220ENST00000569916 ADCK5Q3MIX3 580 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 TSGA10IPQ3SY00 556 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 RNF180Q86T96 592 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 FBXO16Q8IX29 292 aaPredicted RBP15.16■□□□□ 0.02
CNOT1-220ENST00000569916 RGS22Q8NE09 1264 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 TBC1D5Q92609 795 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 MAP3K14Q99558 947 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 AMNQ9BXJ7 453 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 LRRC2Q9BYS8 371 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 MAF1Q9H063 256 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 PHF24Q9UPV7 400 aa15.16■□□□□ 0.02
CNOT1-220ENST00000569916 MYADML2A6NDP7 307 aa15.15■□□□□ 0.02
CNOT1-220ENST00000569916 OPLAHO14841 1288 aa15.15■□□□□ 0.02
CNOT1-220ENST00000569916 EDNRBP24530 442 aa15.15■□□□□ 0.02
CNOT1-220ENST00000569916 ADCYAP1R1P41586 468 aa15.15■□□□□ 0.02
CNOT1-220ENST00000569916 LIFRP42702 1097 aa15.15■□□□□ 0.02
CNOT1-220ENST00000569916 ATN1P54259 1190 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms