RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 CCND3P30281 292 aaPredicted RBP11.43□□□□□ -0.58
CLN6-209ENST00000569336 LIFRP42702 1097 aa11.43□□□□□ -0.58
CLN6-209ENST00000569336 ANTXR2P58335 489 aa11.43□□□□□ -0.58
CLN6-209ENST00000569336 GRM4Q14833 912 aa11.43□□□□□ -0.58
CLN6-209ENST00000569336 CDC37Q16543 378 aaPredicted RBP11.43□□□□□ -0.58
CLN6-209ENST00000569336 TSGA10IPQ3SY00 556 aa11.43□□□□□ -0.58
CLN6-209ENST00000569336 NFXL1Q6ZNB6 911 aa11.43□□□□□ -0.58
CLN6-209ENST00000569336 CHST3Q7LGC8 479 aa11.43□□□□□ -0.58
CLN6-209ENST00000569336 ADGRF4Q8IZF3 695 aa11.43□□□□□ -0.58
CLN6-209ENST00000569336 ZNF654Q8IZM8 581 aa11.43□□□□□ -0.58
CLN6-209ENST00000569336 NEK1Q96PY6 1258 aa11.43□□□□□ -0.58
CLN6-209ENST00000569336 MPHOSPH6Q99547 160 aaKnown RBP11.43□□□□□ -0.58
CLN6-209ENST00000569336 HTATIP2Q9BUP3 242 aa11.43□□□□□ -0.58
CLN6-209ENST00000569336 LY9Q9HBG7 655 aa11.43□□□□□ -0.58
CLN6-209ENST00000569336 DDX20Q9UHI6 824 aaKnown RBP11.43□□□□□ -0.58
CLN6-209ENST00000569336 LOC102724159A0A0B4J2E5 919 aa11.42□□□□□ -0.58
CLN6-209ENST00000569336 PALM3A6NDB9 673 aaPredicted RBP11.42□□□□□ -0.58
CLN6-209ENST00000569336 SH2B2O14492 632 aaPredicted RBP11.42□□□□□ -0.58
CLN6-209ENST00000569336 SEPT4O43236 478 aa11.42□□□□□ -0.58
CLN6-209ENST00000569336 HSPA4P34932 840 aa11.42□□□□□ -0.58
CLN6-209ENST00000569336 SNAP25P60880 206 aa11.42□□□□□ -0.58
CLN6-209ENST00000569336 TROAPQ12815 778 aa11.42□□□□□ -0.58
CLN6-209ENST00000569336 PWP2Q15269 919 aaKnown RBP11.42□□□□□ -0.58
CLN6-209ENST00000569336 USH1GQ495M9 461 aa11.42□□□□□ -0.58
CLN6-209ENST00000569336 MAMDC4Q6UXC1 1216 aa11.42□□□□□ -0.58
CLN6-209ENST00000569336 NSMFQ6X4W1 530 aa11.42□□□□□ -0.58
CLN6-209ENST00000569336 IGDCC4Q8TDY8 1250 aa11.42□□□□□ -0.58
CLN6-209ENST00000569336 UBA5Q9GZZ9 404 aa11.42□□□□□ -0.58
CLN6-209ENST00000569336 CYP39A1Q9NYL5 469 aa11.42□□□□□ -0.58
CLN6-209ENST00000569336 ADD3Q9UEY8 706 aaKnown RBP11.42□□□□□ -0.58
CLN6-209ENST00000569336 MAD2L2Q9UI95 211 aa11.42□□□□□ -0.58
CLN6-209ENST00000569336 OGDHLQ9ULD0 1010 aa11.42□□□□□ -0.58
CLN6-209ENST00000569336 LAMA2P24043 3122 aaKnown RBP11.41□□□□□ -0.58
CLN6-209ENST00000569336 ASB14A6NK59 587 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 B4DLN1 442 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 GNAQP50148 359 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 MRPL12P52815 198 aaKnown RBP11.41□□□□□ -0.58
CLN6-209ENST00000569336 FGD1P98174 961 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 QRICH1Q2TAL8 776 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 MUM1L1Q5H9M0 696 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 SYNE3Q6ZMZ3 975 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 RNF207Q6ZRF8 634 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 DHX32Q7L7V1 743 aaKnown RBP11.41□□□□□ -0.58
CLN6-209ENST00000569336 NECAB2Q7Z6G3 386 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 FBXO11Q86XK2 927 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 FAM133AQ8N9E0 248 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 NUP133Q8WUM0 1156 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 AMNQ9BXJ7 453 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 ABHD16BQ9H3Z7 469 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 SLC12A7Q9Y666 1083 aa11.41□□□□□ -0.58
CLN6-209ENST00000569336 RANBP2P49792 3224 aaKnown RBP11.41□□□□□ -0.58
CLN6-209ENST00000569336 SCN10AQ9Y5Y9 1956 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 PTPDC1A2A3K4 754 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 NFIBO00712 420 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 ZBTB5O15062 677 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 RARBP10826 455 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 AKR1A1P14550 325 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 PSMA5P28066 241 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 ARMCX2Q7L311 632 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 UBE2Q1Q7Z7E8 422 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 SGMS1Q86VZ5 419 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 MCF2L2Q86YR7 1114 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 STAG2Q8N3U4 1231 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 LZTS2Q9BRK4 669 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 SPZ1Q9BXG8 430 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 CPVLQ9H3G5 476 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 JMJD4Q9H9V9 463 aa11.4□□□□□ -0.58
CLN6-209ENST00000569336 SEC63Q9UGP8 760 aaKnown RBP11.4□□□□□ -0.58
CLN6-209ENST00000569336 MRPL11Q9Y3B7 192 aaKnown RBP11.4□□□□□ -0.58
CLN6-209ENST00000569336 TRIP12Q14669 1992 aaPredicted RBP11.39□□□□□ -0.59
CLN6-209ENST00000569336 KBTBD13C9JR72 458 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 SMARCA1P28370 1054 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 RCAN1P53805 252 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 CNTN2Q02246 1040 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 LHX8Q68G74 356 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 BLOC1S2Q6QNY1 142 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 HOMER1Q86YM7 354 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 CCDC144CPQ8IYA2 1237 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 RASEFQ8IZ41 740 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 ARRDC4Q8NCT1 418 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 RGS22Q8NE09 1264 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 TRPV1Q8NER1 839 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 KCNB2Q92953 911 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 MTMR8Q96EF0 704 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 JAKMIP1Q96N16 626 aaKnown RBP11.39□□□□□ -0.59
CLN6-209ENST00000569336 RIOX1Q9H6W3 641 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 SENP2Q9HC62 589 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 VAT1LQ9HCJ6 419 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.39□□□□□ -0.59
CLN6-209ENST00000569336 ZHX1Q9UKY1 873 aaPredicted RBP11.39□□□□□ -0.59
CLN6-209ENST00000569336 TRIOBPQ9H2D6 2365 aa11.39□□□□□ -0.59
CLN6-209ENST00000569336 TANC1Q9C0D5 1861 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 PNMA6FA0A0J9YX94 578 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 DNM1LO00429 736 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 CALML3P27482 149 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 ALDH5A1P51649 535 aaPredicted RBP11.38□□□□□ -0.59
CLN6-209ENST00000569336 RPS6P62753 249 aaKnown RBP11.38□□□□□ -0.59
CLN6-209ENST00000569336 ACVR2BQ13705 512 aa11.38□□□□□ -0.59
CLN6-209ENST00000569336 BAATQ14032 418 aaPredicted RBP11.38□□□□□ -0.59
CLN6-209ENST00000569336 ADCK5Q3MIX3 580 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms