RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 USH1GQ495M9 461 aa16.87■□□□□ 0.29
COMMD4-225ENST00000569245 ARMCX2Q7L311 632 aa16.87■□□□□ 0.29
COMMD4-225ENST00000569245 CCDC144CPQ8IYA2 1237 aa16.87■□□□□ 0.29
COMMD4-225ENST00000569245 FAM133AQ8N9E0 248 aa16.87■□□□□ 0.29
COMMD4-225ENST00000569245 XPNPEP3Q9NQH7 507 aa16.87■□□□□ 0.29
COMMD4-225ENST00000569245 CYP39A1Q9NYL5 469 aa16.87■□□□□ 0.29
COMMD4-225ENST00000569245 FAM184BQ9ULE4 1060 aa16.87■□□□□ 0.29
COMMD4-225ENST00000569245 SOWAHBA6NEL2 793 aa16.86■□□□□ 0.29
COMMD4-225ENST00000569245 ASB14A6NK59 587 aa16.86■□□□□ 0.29
COMMD4-225ENST00000569245 ACVR2BQ13705 512 aa16.86■□□□□ 0.29
COMMD4-225ENST00000569245 BAATQ14032 418 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-225ENST00000569245 WTAPQ15007 396 aa16.86■□□□□ 0.29
COMMD4-225ENST00000569245 NECTIN1Q15223 517 aa16.86■□□□□ 0.29
COMMD4-225ENST00000569245 CDC37Q16543 378 aaPredicted RBP16.86■□□□□ 0.29
COMMD4-225ENST00000569245 TMEM67Q5HYA8 995 aa16.86■□□□□ 0.29
COMMD4-225ENST00000569245 STOX1Q6ZVD7 989 aa16.86■□□□□ 0.29
COMMD4-225ENST00000569245 ADGRF4Q8IZF3 695 aa16.86■□□□□ 0.29
COMMD4-225ENST00000569245 KCNB2Q92953 911 aa16.86■□□□□ 0.29
COMMD4-225ENST00000569245 IL17RAQ96F46 866 aa16.86■□□□□ 0.29
COMMD4-225ENST00000569245 FGD4Q96M96 766 aa16.86■□□□□ 0.29
COMMD4-225ENST00000569245 ABHD16BQ9H3Z7 469 aa16.86■□□□□ 0.29
COMMD4-225ENST00000569245 NFIBO00712 420 aa16.85■□□□□ 0.29
COMMD4-225ENST00000569245 PGK1P00558 417 aa16.85■□□□□ 0.29
COMMD4-225ENST00000569245 ATN1P54259 1190 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-225ENST00000569245 ANAPC15P60006 121 aa16.85■□□□□ 0.29
COMMD4-225ENST00000569245 LRRC41Q15345 812 aa16.85■□□□□ 0.29
COMMD4-225ENST00000569245 RNF180Q86T96 592 aa16.85■□□□□ 0.29
COMMD4-225ENST00000569245 LENG1Q96BZ8 264 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-225ENST00000569245 KLRF2D3W0D1 207 aa16.84■□□□□ 0.29
COMMD4-225ENST00000569245 SLC27A2O14975 620 aa16.84■□□□□ 0.29
COMMD4-225ENST00000569245 CALML3P27482 149 aa16.84■□□□□ 0.29
COMMD4-225ENST00000569245 LRRC26Q2I0M4 334 aa16.84■□□□□ 0.29
COMMD4-225ENST00000569245 CCDC144BQ3MJ40 725 aa16.84■□□□□ 0.29
COMMD4-225ENST00000569245 RNF20Q5VTR2 975 aa16.84■□□□□ 0.29
COMMD4-225ENST00000569245 CREB3L3Q68CJ9 461 aa16.84■□□□□ 0.29
COMMD4-225ENST00000569245 CHRDL2Q6WN34 429 aa16.84■□□□□ 0.29
COMMD4-225ENST00000569245 RNF207Q6ZRF8 634 aa16.84■□□□□ 0.29
COMMD4-225ENST00000569245 NOL8Q76FK4 1167 aaKnown RBP16.84■□□□□ 0.29
COMMD4-225ENST00000569245 CATIPQ7Z7H3 387 aa16.84■□□□□ 0.29
COMMD4-225ENST00000569245 CLEC4DQ8WXI8 215 aa16.84■□□□□ 0.29
COMMD4-225ENST00000569245 FERMT2Q96AC1 680 aa16.84■□□□□ 0.29
COMMD4-225ENST00000569245 PURBQ96QR8 312 aaKnown RBP16.84■□□□□ 0.29
COMMD4-225ENST00000569245 ADD3Q9UEY8 706 aaKnown RBP16.84■□□□□ 0.29
COMMD4-225ENST00000569245 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
COMMD4-225ENST00000569245 WDR19Q8NEZ3 1342 aa16.84■□□□□ 0.29
COMMD4-225ENST00000569245 ZNFX1Q9P2E3 1918 aaKnown RBP16.84■□□□□ 0.29
COMMD4-225ENST00000569245 MCM5P33992 734 aa16.83■□□□□ 0.28
COMMD4-225ENST00000569245 ADCYAP1R1P41586 468 aa16.83■□□□□ 0.28
COMMD4-225ENST00000569245 MB21D2Q8IYB1 491 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-225ENST00000569245 STAG2Q8N3U4 1231 aa16.83■□□□□ 0.28
COMMD4-225ENST00000569245 JMJD4Q9H9V9 463 aa16.83■□□□□ 0.28
COMMD4-225ENST00000569245 SENP2Q9HC62 589 aa16.83■□□□□ 0.28
COMMD4-225ENST00000569245 ZMYND8Q9ULU4 1186 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-225ENST00000569245 COLQQ9Y215 455 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-225ENST00000569245 CEP290O15078 2479 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 DNAH12Q6ZR08 3092 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 ABCB11O95342 1321 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 PRC1O43663 620 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 ANTXR2P58335 489 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 QRICH1Q2TAL8 776 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 TSGA10IPQ3SY00 556 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 SLC30A10Q6XR72 485 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 NFXL1Q6ZNB6 911 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 EEPD1Q7L9B9 569 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 FBXO11Q86XK2 927 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 IGDCC4Q8TDY8 1250 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 NUP133Q8WUM0 1156 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 KIF2CQ99661 725 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 SPC25Q9HBM1 224 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 MAD2L2Q9UI95 211 aa16.82■□□□□ 0.28
COMMD4-225ENST00000569245 DDX49Q9Y6V7 483 aaKnown RBP16.82■□□□□ 0.28
COMMD4-225ENST00000569245 PALM3A6NDB9 673 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-225ENST00000569245 DUSP11O75319 330 aaKnown RBP16.81■□□□□ 0.28
COMMD4-225ENST00000569245 SYN1P17600 705 aa16.81■□□□□ 0.28
COMMD4-225ENST00000569245 RPS6P62753 249 aaKnown RBP16.81■□□□□ 0.28
COMMD4-225ENST00000569245 TNFAIP2Q03169 654 aa16.81■□□□□ 0.28
COMMD4-225ENST00000569245 GRM4Q14833 912 aa16.81■□□□□ 0.28
COMMD4-225ENST00000569245 MPHOSPH6Q99547 160 aaKnown RBP16.81■□□□□ 0.28
COMMD4-225ENST00000569245 MRPL11Q9Y3B7 192 aaKnown RBP16.81■□□□□ 0.28
COMMD4-225ENST00000569245 ASTN1O14525 1302 aa16.8■□□□□ 0.28
COMMD4-225ENST00000569245 SYNRGQ9UMZ2 1314 aa16.8■□□□□ 0.28
COMMD4-225ENST00000569245 C6orf222P0C671 652 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-225ENST00000569245 ALDH5A1P51649 535 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-225ENST00000569245 HABP4Q5JVS0 413 aaKnown RBP16.8■□□□□ 0.28
COMMD4-225ENST00000569245 SLC39A5Q6ZMH5 540 aa16.8■□□□□ 0.28
COMMD4-225ENST00000569245 HOMER1Q86YM7 354 aa16.8■□□□□ 0.28
COMMD4-225ENST00000569245 MCF2L2Q86YR7 1114 aa16.8■□□□□ 0.28
COMMD4-225ENST00000569245 FBXO16Q8IX29 292 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-225ENST00000569245 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
COMMD4-225ENST00000569245 RGS22Q8NE09 1264 aa16.8■□□□□ 0.28
COMMD4-225ENST00000569245 AMNQ9BXJ7 453 aa16.8■□□□□ 0.28
COMMD4-225ENST00000569245 GPHNQ9NQX3 736 aaPredicted RBP16.8■□□□□ 0.28
COMMD4-225ENST00000569245 ATP11BQ9Y2G3 1177 aa16.8■□□□□ 0.28
COMMD4-225ENST00000569245 SNX14Q9Y5W7 946 aa16.8■□□□□ 0.28
COMMD4-225ENST00000569245 PLXNA1Q9UIW2 1896 aa16.8■□□□□ 0.28
COMMD4-225ENST00000569245 CCDC69A6NI79 296 aa16.79■□□□□ 0.28
COMMD4-225ENST00000569245 B4DLN1 442 aa16.79■□□□□ 0.28
COMMD4-225ENST00000569245 ADAMTS4O75173 837 aa16.79■□□□□ 0.28
COMMD4-225ENST00000569245 MRPL12P52815 198 aaKnown RBP16.79■□□□□ 0.28
COMMD4-225ENST00000569245 RTP1P59025 263 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms