RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 PFASO15067 1338 aa10.54□□□□□ -0.72
CHD9-219ENST00000569225 CNTNAP5Q8WYK1 1306 aa10.54□□□□□ -0.72
CHD9-219ENST00000569225 hCG_1984214I3L0E3 225 aa10.54□□□□□ -0.72
CHD9-219ENST00000569225 RGS2P41220 211 aa10.54□□□□□ -0.72
CHD9-219ENST00000569225 SLC35G1Q2M3R5 365 aa10.54□□□□□ -0.72
CHD9-219ENST00000569225 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.54□□□□□ -0.72
CHD9-219ENST00000569225 OTOP1Q7RTM1 612 aa10.54□□□□□ -0.72
CHD9-219ENST00000569225 MCF2L2Q86YR7 1114 aa10.54□□□□□ -0.72
CHD9-219ENST00000569225 ANKRD35Q8N283 1001 aa10.54□□□□□ -0.72
CHD9-219ENST00000569225 ZNF713Q8N859 430 aaPredicted RBP10.54□□□□□ -0.72
CHD9-219ENST00000569225 GTF3C6Q969F1 213 aa10.54□□□□□ -0.72
CHD9-219ENST00000569225 RIPK3Q9Y572 518 aa10.54□□□□□ -0.72
CHD9-219ENST00000569225 V9GY48 417 aaPredicted RBP10.54□□□□□ -0.72
CHD9-219ENST00000569225 CTGFP29279 349 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 SSRP1Q08945 709 aaKnown RBP10.53□□□□□ -0.72
CHD9-219ENST00000569225 FUT2Q10981 343 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 SCRN1Q12765 414 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 GRB14Q14449 540 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 ME3Q16798 604 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 RAET1EQ8TD07 263 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 DDX11Q96FC9 970 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 RNF26Q9BY78 433 aaPredicted RBP10.53□□□□□ -0.72
CHD9-219ENST00000569225 PRPF3O43395 683 aaKnown RBP10.53□□□□□ -0.72
CHD9-219ENST00000569225 ADORA2AP29274 412 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 PRKCZQ05513 592 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 MAP2K5Q13163 448 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 MORN1Q5T089 497 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 PPP1R18Q6NYC8 613 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 HEATR3Q7Z4Q2 680 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 DPP9Q86TI2 863 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 TRMT44Q8IYL2 757 aaKnown RBP10.53□□□□□ -0.72
CHD9-219ENST00000569225 RGS22Q8NE09 1264 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 APBA2Q99767 749 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 SLC26A6Q9BXS9 759 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 RLFQ13129 1914 aa10.53□□□□□ -0.72
CHD9-219ENST00000569225 PPP1R11O60927 126 aaPredicted RBP10.52□□□□□ -0.73
CHD9-219ENST00000569225 XRCC5P13010 732 aaKnown RBP10.52□□□□□ -0.73
CHD9-219ENST00000569225 FLT3LGP49771 235 aa10.52□□□□□ -0.73
CHD9-219ENST00000569225 IRF5Q13568 498 aa10.52□□□□□ -0.73
CHD9-219ENST00000569225 NTRK3Q16288 839 aa10.52□□□□□ -0.73
CHD9-219ENST00000569225 PFKFB3Q16875 520 aaPredicted RBP10.52□□□□□ -0.73
CHD9-219ENST00000569225 NSMFQ6X4W1 530 aa10.52□□□□□ -0.73
CHD9-219ENST00000569225 TEX2Q8IWB9 1127 aa10.52□□□□□ -0.73
CHD9-219ENST00000569225 SAMD3Q8N6K7 520 aa10.52□□□□□ -0.73
CHD9-219ENST00000569225 NECAB1Q8N987 351 aa10.52□□□□□ -0.73
CHD9-219ENST00000569225 CCDC12Q8WUD4 166 aaPredicted RBP10.52□□□□□ -0.73
CHD9-219ENST00000569225 WASF1Q92558 559 aa10.52□□□□□ -0.73
CHD9-219ENST00000569225 PHKBQ93100 1093 aa10.52□□□□□ -0.73
CHD9-219ENST00000569225 GJD2Q9UKL4 321 aa10.52□□□□□ -0.73
CHD9-219ENST00000569225 hCG_1642624A0A1W2PR95 340 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 PTPDC1A2A3K4 754 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 POTEB2H3BUK9 544 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 NFIBO00712 420 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 DEXIO95424 95 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 HOXC6P09630 235 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 SCG2P13521 617 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 MUM1L1Q5H9M0 696 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 FBXO46Q6PJ61 603 aaPredicted RBP10.51□□□□□ -0.73
CHD9-219ENST00000569225 RNF207Q6ZRF8 634 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 CLEC4DQ8WXI8 215 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 USP6NLQ92738 828 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 LLPHQ9BRT6 129 aaKnown RBP10.51□□□□□ -0.73
CHD9-219ENST00000569225 GLT8D2Q9H1C3 349 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 A1CFQ9NQ94 594 aaKnown RBP10.51□□□□□ -0.73
CHD9-219ENST00000569225 MAP3K20Q9NYL2 800 aaKnown RBP10.51□□□□□ -0.73
CHD9-219ENST00000569225 PTPN22Q9Y2R2 807 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 STK36Q9NRP7 1315 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 LARGE1O95461 756 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 TAL1P17542 331 aaPredicted RBP10.51□□□□□ -0.73
CHD9-219ENST00000569225 CYP2B6P20813 491 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 NAPAP54920 295 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 CAP1Q01518 475 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 FAM177A1Q8N128 213 aaPredicted RBP10.51□□□□□ -0.73
CHD9-219ENST00000569225 SLAIN1Q8ND83 568 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 CCDC148Q8NFR7 591 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 CUL5Q93034 780 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 MPHOSPH6Q99547 160 aaKnown RBP10.51□□□□□ -0.73
CHD9-219ENST00000569225 BARHL2Q9NY43 387 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 CYP39A1Q9NYL5 469 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 ADD3Q9UEY8 706 aaKnown RBP10.51□□□□□ -0.73
CHD9-219ENST00000569225 GABRQQ9UN88 632 aa10.51□□□□□ -0.73
CHD9-219ENST00000569225 DIS3Q9Y2L1 958 aaKnown RBP10.51□□□□□ -0.73
CHD9-219ENST00000569225 PARP14Q460N5 1801 aa10.5□□□□□ -0.73
CHD9-219ENST00000569225 B4DLN1 442 aa10.5□□□□□ -0.73
CHD9-219ENST00000569225 GCOM1H8Y6P7 765 aaPredicted RBP10.5□□□□□ -0.73
CHD9-219ENST00000569225 ADCY3O60266 1144 aa10.5□□□□□ -0.73
CHD9-219ENST00000569225 PGK2P07205 417 aa10.5□□□□□ -0.73
CHD9-219ENST00000569225 POLR2MP0CAP2 368 aa10.5□□□□□ -0.73
CHD9-219ENST00000569225 XBP1P17861 261 aa10.5□□□□□ -0.73
CHD9-219ENST00000569225 MRPL12P52815 198 aaKnown RBP10.5□□□□□ -0.73
CHD9-219ENST00000569225 BAATQ14032 418 aaPredicted RBP10.5□□□□□ -0.73
CHD9-219ENST00000569225 WWC2Q6AWC2 1192 aa10.5□□□□□ -0.73
CHD9-219ENST00000569225 CCDC83Q8IWF9 413 aa10.5□□□□□ -0.73
CHD9-219ENST00000569225 PXYLP1Q8TE99 480 aa10.5□□□□□ -0.73
CHD9-219ENST00000569225 GPKOWQ92917 476 aaPredicted RBP eCLIP10.5□□□□□ -0.73
CHD9-219ENST00000569225 TMX3Q96JJ7 454 aa10.5□□□□□ -0.73
CHD9-219ENST00000569225 PSTPIP2Q9H939 334 aa10.5□□□□□ -0.73
CHD9-219ENST00000569225 DNAJC25-GNG10A0A024R161 153 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 STXBP3O00186 592 aa10.49□□□□□ -0.73
CHD9-219ENST00000569225 CFBP00751 764 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms