RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 TRIM43BA6NCK2 446 aa21.4■■□□□ 1.02
SYNGR3-205ENST00000568896 ZNF792Q3KQV3 632 aa21.4■■□□□ 1.02
SYNGR3-205ENST00000568896 TSGA10IPQ3SY00 556 aa21.4■■□□□ 1.02
SYNGR3-205ENST00000568896 TMEM67Q5HYA8 995 aa21.4■■□□□ 1.02
SYNGR3-205ENST00000568896 GPATCH4Q5T3I0 446 aaKnown RBP21.4■■□□□ 1.02
SYNGR3-205ENST00000568896 SYDE2Q5VT97 1194 aa21.4■■□□□ 1.02
SYNGR3-205ENST00000568896 FAM109BQ6ICB4 259 aaPredicted RBP21.4■■□□□ 1.02
SYNGR3-205ENST00000568896 TRIM43Q96BQ3 446 aaPredicted RBP21.4■■□□□ 1.02
SYNGR3-205ENST00000568896 SENP2Q9HC62 589 aa21.4■■□□□ 1.02
SYNGR3-205ENST00000568896 PDLIM7Q9NR12 457 aa21.4■■□□□ 1.02
SYNGR3-205ENST00000568896 PRC1O43663 620 aa21.39■■□□□ 1.01
SYNGR3-205ENST00000568896 GOLGA8HP0CJ92 632 aa21.39■■□□□ 1.01
SYNGR3-205ENST00000568896 MCM5P33992 734 aa21.39■■□□□ 1.01
SYNGR3-205ENST00000568896 HSPA4P34932 840 aa21.39■■□□□ 1.01
SYNGR3-205ENST00000568896 COPB2P35606 906 aa21.39■■□□□ 1.01
SYNGR3-205ENST00000568896 OAZ1P54368 228 aa21.39■■□□□ 1.01
SYNGR3-205ENST00000568896 WTAPQ15007 396 aa21.39■■□□□ 1.01
SYNGR3-205ENST00000568896 IGDCC4Q8TDY8 1250 aa21.39■■□□□ 1.01
SYNGR3-205ENST00000568896 TINF2Q9BSI4 451 aa21.39■■□□□ 1.01
SYNGR3-205ENST00000568896 RIPK3Q9Y572 518 aa21.39■■□□□ 1.01
SYNGR3-205ENST00000568896 ZNF536O15090 1300 aa21.38■■□□□ 1.01
SYNGR3-205ENST00000568896 PGK1P00558 417 aa21.38■■□□□ 1.01
SYNGR3-205ENST00000568896 SNAP25P60880 206 aa21.38■■□□□ 1.01
SYNGR3-205ENST00000568896 TLE2Q04725 743 aa21.38■■□□□ 1.01
SYNGR3-205ENST00000568896 KCTD2Q14681 263 aa21.38■■□□□ 1.01
SYNGR3-205ENST00000568896 ASPRV1Q53RT3 343 aa21.38■■□□□ 1.01
SYNGR3-205ENST00000568896 KCNB2Q92953 911 aa21.38■■□□□ 1.01
SYNGR3-205ENST00000568896 LENG1Q96BZ8 264 aaPredicted RBP21.38■■□□□ 1.01
SYNGR3-205ENST00000568896 MTA3Q9BTC8 594 aa21.38■■□□□ 1.01
SYNGR3-205ENST00000568896 XPNPEP3Q9NQH7 507 aa21.38■■□□□ 1.01
SYNGR3-205ENST00000568896 GPHNQ9NQX3 736 aaPredicted RBP21.38■■□□□ 1.01
SYNGR3-205ENST00000568896 CUL9Q8IWT3 2517 aa21.37■■□□□ 1.01
SYNGR3-205ENST00000568896 EPB41L2O43491 1005 aaKnown RBP21.37■■□□□ 1.01
SYNGR3-205ENST00000568896 ZNF865P0CJ78 1059 aaPredicted RBP21.37■■□□□ 1.01
SYNGR3-205ENST00000568896 RARBP10826 455 aa21.37■■□□□ 1.01
SYNGR3-205ENST00000568896 ITGB8P26012 769 aa21.37■■□□□ 1.01
SYNGR3-205ENST00000568896 SLC4A3P48751 1232 aa21.37■■□□□ 1.01
SYNGR3-205ENST00000568896 ADCK5Q3MIX3 580 aa21.37■■□□□ 1.01
SYNGR3-205ENST00000568896 TMEM87BQ96K49 555 aa21.37■■□□□ 1.01
SYNGR3-205ENST00000568896 NEK1Q96PY6 1258 aa21.37■■□□□ 1.01
SYNGR3-205ENST00000568896 RANBP17Q9H2T7 1088 aaKnown RBP21.37■■□□□ 1.01
SYNGR3-205ENST00000568896 LY9Q9HBG7 655 aa21.37■■□□□ 1.01
SYNGR3-205ENST00000568896 PHF24Q9UPV7 400 aa21.37■■□□□ 1.01
SYNGR3-205ENST00000568896 SH2B2O14492 632 aaPredicted RBP21.36■■□□□ 1.01
SYNGR3-205ENST00000568896 PARP1P09874 1014 aaKnown RBP21.36■■□□□ 1.01
SYNGR3-205ENST00000568896 KRT32Q14532 448 aa21.36■■□□□ 1.01
SYNGR3-205ENST00000568896 C1orf53Q5VUE5 145 aa21.36■■□□□ 1.01
SYNGR3-205ENST00000568896 CCDC174Q6PII3 467 aa21.36■■□□□ 1.01
SYNGR3-205ENST00000568896 AGBL1Q96MI9 1066 aa21.36■■□□□ 1.01
SYNGR3-205ENST00000568896 CPVLQ9H3G5 476 aa21.36■■□□□ 1.01
SYNGR3-205ENST00000568896 NRBP1Q9UHY1 535 aa21.36■■□□□ 1.01
SYNGR3-205ENST00000568896 DIS3Q9Y2L1 958 aaKnown RBP21.36■■□□□ 1.01
SYNGR3-205ENST00000568896 LTBP2Q14767 1821 aa21.35■■□□□ 1.01
SYNGR3-205ENST00000568896 ZNF697Q5TEC3 545 aa21.35■■□□□ 1.01
SYNGR3-205ENST00000568896 UBA5Q9GZZ9 404 aa21.35■■□□□ 1.01
SYNGR3-205ENST00000568896 SNX14Q9Y5W7 946 aa21.35■■□□□ 1.01
SYNGR3-205ENST00000568896 TROAPQ12815 778 aa21.34■■□□□ 1.01
SYNGR3-205ENST00000568896 RNF180Q86T96 592 aa21.34■■□□□ 1.01
SYNGR3-205ENST00000568896 STAG2Q8N3U4 1231 aa21.34■■□□□ 1.01
SYNGR3-205ENST00000568896 USP26Q9BXU7 913 aa21.34■■□□□ 1.01
SYNGR3-205ENST00000568896 LRRC2Q9BYS8 371 aa21.34■■□□□ 1.01
SYNGR3-205ENST00000568896 SEMA6BQ9H3T3 888 aa21.34■■□□□ 1.01
SYNGR3-205ENST00000568896 HOMER2Q9NSB8 354 aa21.34■■□□□ 1.01
SYNGR3-205ENST00000568896 WDR19Q8NEZ3 1342 aa21.33■■□□□ 1.01
SYNGR3-205ENST00000568896 SMCHD1A6NHR9 2005 aa21.33■■□□□ 1.01
SYNGR3-205ENST00000568896 ICAM1P05362 532 aa21.33■■□□□ 1.01
SYNGR3-205ENST00000568896 EPHB4P54760 987 aa21.33■■□□□ 1.01
SYNGR3-205ENST00000568896 GRM4Q14833 912 aa21.33■■□□□ 1.01
SYNGR3-205ENST00000568896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.33■■□□□ 1.01
SYNGR3-205ENST00000568896 CATIPQ7Z7H3 387 aa21.33■■□□□ 1.01
SYNGR3-205ENST00000568896 CHST13Q8NET6 341 aa21.33■■□□□ 1.01
SYNGR3-205ENST00000568896 CDX2Q99626 313 aaPredicted RBP21.33■■□□□ 1.01
SYNGR3-205ENST00000568896 RNF146Q9NTX7 359 aa21.33■■□□□ 1.01
SYNGR3-205ENST00000568896 FBXO40Q9UH90 709 aa21.33■■□□□ 1.01
SYNGR3-205ENST00000568896 MAD2L2Q9UI95 211 aa21.33■■□□□ 1.01
SYNGR3-205ENST00000568896 CCPG1Q9ULG6 757 aa21.33■■□□□ 1.01
SYNGR3-205ENST00000568896 ZNFX1Q9P2E3 1918 aaKnown RBP21.33■■□□□ 1
SYNGR3-205ENST00000568896 A0A1W2PQ45 241 aaPredicted RBP21.32■■□□□ 1
SYNGR3-205ENST00000568896 A0A1W2PQY0 241 aa21.32■■□□□ 1
SYNGR3-205ENST00000568896 PQBP1O60828 265 aaKnown RBP21.32■■□□□ 1
SYNGR3-205ENST00000568896 ADAMTS4O75173 837 aa21.32■■□□□ 1
SYNGR3-205ENST00000568896 SNAI1O95863 264 aaPredicted RBP21.32■■□□□ 1
SYNGR3-205ENST00000568896 CLTBP09497 229 aa21.32■■□□□ 1
SYNGR3-205ENST00000568896 ALAS1P13196 640 aa21.32■■□□□ 1
SYNGR3-205ENST00000568896 AKR1A1P14550 325 aa21.32■■□□□ 1
SYNGR3-205ENST00000568896 LIFRP42702 1097 aa21.32■■□□□ 1
SYNGR3-205ENST00000568896 EXOSC10Q01780 885 aaKnown RBP21.32■■□□□ 1
SYNGR3-205ENST00000568896 TKFCQ3LXA3 575 aa21.32■■□□□ 1
SYNGR3-205ENST00000568896 DHX32Q7L7V1 743 aaKnown RBP21.32■■□□□ 1
SYNGR3-205ENST00000568896 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.32■■□□□ 1
SYNGR3-205ENST00000568896 ZNF654Q8IZM8 581 aa21.32■■□□□ 1
SYNGR3-205ENST00000568896 TMTC2Q8N394 836 aa21.32■■□□□ 1
SYNGR3-205ENST00000568896 TCEANC2Q96MN5 208 aa21.32■■□□□ 1
SYNGR3-205ENST00000568896 COL25A1Q9BXS0 654 aaPredicted RBP21.32■■□□□ 1
SYNGR3-205ENST00000568896 EYSQ5T1H1 3165 aa21.32■■□□□ 1
SYNGR3-205ENST00000568896 PALM3A6NDB9 673 aaPredicted RBP21.31■■□□□ 1
SYNGR3-205ENST00000568896 KLRF2D3W0D1 207 aa21.31■■□□□ 1
SYNGR3-205ENST00000568896 DDAH1O94760 285 aa21.31■■□□□ 1
SYNGR3-205ENST00000568896 NFXL1Q6ZNB6 911 aa21.31■■□□□ 1
SYNGR3-205ENST00000568896 ADGRF4Q8IZF3 695 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms