RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 STRNO43815 780 aa19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 PFKFB2O60825 505 aa19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 GNRH1P01148 92 aa19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 CYP2B6P20813 491 aa19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 PPP2R5BQ15173 497 aa19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 ANKRD1Q15327 319 aa19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 FBXO11Q86XK2 927 aa19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 CHST13Q8NET6 341 aa19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 NPLOC4Q8TAT6 608 aa19.3■□□□□ 0.68
CNEP1R1-210ENST00000568890 CTDNEP1O95476 244 aa19.29■□□□□ 0.68
CNEP1R1-210ENST00000568890 FCER1AP12319 257 aa19.29■□□□□ 0.68
CNEP1R1-210ENST00000568890 CCL14Q16627 93 aa19.29■□□□□ 0.68
CNEP1R1-210ENST00000568890 NUDT12Q9BQG2 462 aa19.29■□□□□ 0.68
CNEP1R1-210ENST00000568890 MCOLN1Q9GZU1 580 aa19.29■□□□□ 0.68
CNEP1R1-210ENST00000568890 A1CFQ9NQ94 594 aaKnown RBP19.29■□□□□ 0.68
CNEP1R1-210ENST00000568890 PCDHA1Q9Y5I3 950 aa19.29■□□□□ 0.68
CNEP1R1-210ENST00000568890 DNAJC25-GNG10A0A024R161 153 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 SLC15A5A6NIM6 579 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 PKN1Q16512 942 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 RRP36Q96EU6 259 aaKnown RBP19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 AMNQ9BXJ7 453 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 FLRT1Q9NZU1 646 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 CCDC196A0A1B0GTZ2 297 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 IFNAR1P17181 557 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 CNTN2Q02246 1040 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 MAP2K5Q13163 448 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 TYW1BQ6NUM6 668 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 ABRAQ8N0Z2 381 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 MMP19Q99542 508 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 SLKQ9H2G2 1235 aaPredicted RBP19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 ACAD9Q9H845 621 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 LIMCH1Q9UPQ0 1083 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 IVNS1ABPQ9Y6Y0 642 aa19.28■□□□□ 0.68
CNEP1R1-210ENST00000568890 MKI67P46013 3256 aaKnown RBP19.27■□□□□ 0.68
CNEP1R1-210ENST00000568890 ELNP15502 786 aa19.27■□□□□ 0.68
CNEP1R1-210ENST00000568890 HOXD10P28358 340 aa19.27■□□□□ 0.68
CNEP1R1-210ENST00000568890 TKFCQ3LXA3 575 aa19.27■□□□□ 0.68
CNEP1R1-210ENST00000568890 SHISA4Q96DD7 197 aa19.27■□□□□ 0.68
CNEP1R1-210ENST00000568890 FGD4Q96M96 766 aa19.27■□□□□ 0.68
CNEP1R1-210ENST00000568890 DDX49Q9Y6V7 483 aaKnown RBP19.27■□□□□ 0.68
CNEP1R1-210ENST00000568890 IGHA2P01877 340 aa19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 BAATQ14032 418 aaPredicted RBP19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 ARHGEF6Q15052 776 aa19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 ANKRD35Q8N283 1001 aa19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 GPKOWQ92917 476 aaPredicted RBP eCLIP19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 CWC22Q9HCG8 908 aaKnown RBP19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 CYP39A1Q9NYL5 469 aa19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 ASTN1O14525 1302 aa19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 PLXNB2O15031 1838 aa19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 HOXC6P09630 235 aa19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 COPB2P35606 906 aa19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 TRIM32Q13049 653 aa19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 IRF5Q13568 498 aa19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 KCTD2Q14681 263 aa19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 ZNF792Q3KQV3 632 aa19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 NSMFQ6X4W1 530 aa19.26■□□□□ 0.67
CNEP1R1-210ENST00000568890 MGAMO43451 1857 aa19.25■□□□□ 0.67
CNEP1R1-210ENST00000568890 WWC2Q6AWC2 1192 aa19.25■□□□□ 0.67
CNEP1R1-210ENST00000568890 FBXO46Q6PJ61 603 aaPredicted RBP19.25■□□□□ 0.67
CNEP1R1-210ENST00000568890 DPP9Q86TI2 863 aa19.25■□□□□ 0.67
CNEP1R1-210ENST00000568890 RAET1EQ8TD07 263 aa19.25■□□□□ 0.67
CNEP1R1-210ENST00000568890 SH3TC2Q8TF17 1288 aa19.25■□□□□ 0.67
CNEP1R1-210ENST00000568890 TRIB2Q92519 343 aa19.25■□□□□ 0.67
CNEP1R1-210ENST00000568890 GTF3C6Q969F1 213 aa19.25■□□□□ 0.67
CNEP1R1-210ENST00000568890 FBXO40Q9UH90 709 aa19.25■□□□□ 0.67
CNEP1R1-210ENST00000568890 ADAMTS3O15072 1205 aa19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 PRPF3O43395 683 aaKnown RBP19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 ADCY3O60266 1144 aa19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 XRCC5P13010 732 aaKnown RBP19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 RPS6P62753 249 aaKnown RBP19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 SLC30A10Q6XR72 485 aa19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 SOCS4Q8WXH5 440 aa19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 DDX11Q96FC9 970 aa19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 COL20A1Q9P218 1284 aa19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 PRMT2P55345 433 aa19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 PKN2Q16513 984 aaKnown RBP19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 FAM133AQ8N9E0 248 aa19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 AIFM3Q96NN9 605 aa19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 SLC26A6Q9BXS9 759 aa19.24■□□□□ 0.67
CNEP1R1-210ENST00000568890 ABCB11O95342 1321 aa19.23■□□□□ 0.67
CNEP1R1-210ENST00000568890 SOWAHBA6NEL2 793 aa19.23■□□□□ 0.67
CNEP1R1-210ENST00000568890 FDPSP14324 419 aaKnown RBP19.23■□□□□ 0.67
CNEP1R1-210ENST00000568890 RGS2P41220 211 aa19.23■□□□□ 0.67
CNEP1R1-210ENST00000568890 MAML3Q96JK9 1138 aa19.23■□□□□ 0.67
CNEP1R1-210ENST00000568890 SEC63Q9UGP8 760 aaKnown RBP19.23■□□□□ 0.67
CNEP1R1-210ENST00000568890 MRPL11Q9Y3B7 192 aaKnown RBP19.23■□□□□ 0.67
CNEP1R1-210ENST00000568890 PTPDC1A2A3K4 754 aa19.23■□□□□ 0.67
CNEP1R1-210ENST00000568890 PFKFB3Q16875 520 aaPredicted RBP19.23■□□□□ 0.67
CNEP1R1-210ENST00000568890 HEATR3Q7Z4Q2 680 aa19.23■□□□□ 0.67
CNEP1R1-210ENST00000568890 RGS22Q8NE09 1264 aa19.23■□□□□ 0.67
CNEP1R1-210ENST00000568890 CPLX1O14810 134 aa19.22■□□□□ 0.67
CNEP1R1-210ENST00000568890 JAK2O60674 1132 aa19.22■□□□□ 0.67
CNEP1R1-210ENST00000568890 CFBP00751 764 aa19.22■□□□□ 0.67
CNEP1R1-210ENST00000568890 CALML3P27482 149 aa19.22■□□□□ 0.67
CNEP1R1-210ENST00000568890 HOXA13P31271 388 aaPredicted RBP19.22■□□□□ 0.67
CNEP1R1-210ENST00000568890 GRK4P32298 578 aa19.22■□□□□ 0.67
CNEP1R1-210ENST00000568890 RNF207Q6ZRF8 634 aa19.22■□□□□ 0.67
CNEP1R1-210ENST00000568890 PXYLP1Q8TE99 480 aa19.22■□□□□ 0.67
CNEP1R1-210ENST00000568890 TMX3Q96JJ7 454 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms