RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 KRT40Q6A162 431 aa17.73■□□□□ 0.43
USB1-214ENST00000568848 KCTD1Q719H9 257 aa17.73■□□□□ 0.43
USB1-214ENST00000568848 TLK2Q86UE8 772 aa17.73■□□□□ 0.43
USB1-214ENST00000568848 LRRCC1Q9C099 1032 aa17.73■□□□□ 0.43
USB1-214ENST00000568848 HIPK3Q9H422 1215 aa17.73■□□□□ 0.43
USB1-214ENST00000568848 CERS4Q9HA82 394 aa17.73■□□□□ 0.43
USB1-214ENST00000568848 THEGQ9P2T0 379 aa17.73■□□□□ 0.43
USB1-214ENST00000568848 DDX19BQ9UMR2 479 aa17.73■□□□□ 0.43
USB1-214ENST00000568848 GNEQ9Y223 722 aaKnown RBP17.73■□□□□ 0.43
USB1-214ENST00000568848 DYNC1LI2O43237 492 aaPredicted RBP17.72■□□□□ 0.43
USB1-214ENST00000568848 ARHGEF15O94989 841 aa17.72■□□□□ 0.43
USB1-214ENST00000568848 BMP3P12645 472 aa17.72■□□□□ 0.43
USB1-214ENST00000568848 ALAS1P13196 640 aa17.72■□□□□ 0.43
USB1-214ENST00000568848 MCCP23508 829 aa17.72■□□□□ 0.43
USB1-214ENST00000568848 PSRC1Q6PGN9 363 aaPredicted RBP17.72■□□□□ 0.43
USB1-214ENST00000568848 ZNF444Q8N0Y2 327 aaPredicted RBP17.72■□□□□ 0.43
USB1-214ENST00000568848 KBTBD3Q8NAB2 608 aa17.72■□□□□ 0.43
USB1-214ENST00000568848 OTUD7AQ8TE49 926 aaPredicted RBP17.72■□□□□ 0.43
USB1-214ENST00000568848 HERVK_113Q902F9 699 aa17.72■□□□□ 0.43
USB1-214ENST00000568848 APPBP2Q92624 585 aa17.72■□□□□ 0.43
USB1-214ENST00000568848 ASB2Q96Q27 587 aa17.72■□□□□ 0.43
USB1-214ENST00000568848 SPC25Q9HBM1 224 aa17.72■□□□□ 0.43
USB1-214ENST00000568848 ECHDC1Q9NTX5 307 aa17.72■□□□□ 0.43
USB1-214ENST00000568848 FEM1BQ9UK73 627 aa17.72■□□□□ 0.43
USB1-214ENST00000568848 PRRC2BQ5JSZ5 2229 aaKnown RBP17.72■□□□□ 0.43
USB1-214ENST00000568848 MROH7Q68CQ1 1323 aa17.72■□□□□ 0.43
USB1-214ENST00000568848 TLR3O15455 904 aaKnown RBP17.71■□□□□ 0.43
USB1-214ENST00000568848 RNF113AO15541 343 aaKnown RBP17.71■□□□□ 0.43
USB1-214ENST00000568848 CYP2C9P11712 490 aa17.71■□□□□ 0.43
USB1-214ENST00000568848 IKQ13123 557 aaPredicted RBP17.71■□□□□ 0.43
USB1-214ENST00000568848 ITGA7Q13683 1181 aa17.71■□□□□ 0.43
USB1-214ENST00000568848 FSCN1Q16658 493 aaKnown RBP17.71■□□□□ 0.43
USB1-214ENST00000568848 ZSCAN25Q6NSZ9 544 aa17.71■□□□□ 0.43
USB1-214ENST00000568848 SPRED2Q7Z698 418 aa17.71■□□□□ 0.43
USB1-214ENST00000568848 CHST13Q8NET6 341 aa17.71■□□□□ 0.43
USB1-214ENST00000568848 UHRF1Q96T88 793 aaPredicted RBP17.71■□□□□ 0.43
USB1-214ENST00000568848 NOC4LQ9BVI4 516 aaKnown RBP17.71■□□□□ 0.43
USB1-214ENST00000568848 ACAD9Q9H845 621 aa17.71■□□□□ 0.43
USB1-214ENST00000568848 TRMT13Q9NUP7 481 aaKnown RBP17.71■□□□□ 0.43
USB1-214ENST00000568848 EPOPA6NHQ4 379 aa17.7■□□□□ 0.42
USB1-214ENST00000568848 ZBBXA8MT70 800 aa17.7■□□□□ 0.42
USB1-214ENST00000568848 TTLL1O95922 423 aa17.7■□□□□ 0.42
USB1-214ENST00000568848 FGBP02675 491 aa17.7■□□□□ 0.42
USB1-214ENST00000568848 KCNQ1P51787 676 aa17.7■□□□□ 0.42
USB1-214ENST00000568848 TFAP4Q01664 338 aa17.7■□□□□ 0.42
USB1-214ENST00000568848 TTLL4Q14679 1199 aa17.7■□□□□ 0.42
USB1-214ENST00000568848 TAPT1Q6NXT6 567 aa17.7■□□□□ 0.42
USB1-214ENST00000568848 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
USB1-214ENST00000568848 SLC43A3Q8NBI5 491 aa17.7■□□□□ 0.42
USB1-214ENST00000568848 MKL1Q969V6 931 aa17.7■□□□□ 0.42
USB1-214ENST00000568848 TRERF1Q96PN7 1200 aa17.7■□□□□ 0.42
USB1-214ENST00000568848 MSRAQ9UJ68 235 aa17.7■□□□□ 0.42
USB1-214ENST00000568848 TSPY3P0CV98 308 aa17.69■□□□□ 0.42
USB1-214ENST00000568848 TSPY8P0CW00 308 aa17.69■□□□□ 0.42
USB1-214ENST00000568848 CTDSPL2Q05D32 466 aa17.69■□□□□ 0.42
USB1-214ENST00000568848 AKNAD1Q5T1N1 836 aa17.69■□□□□ 0.42
USB1-214ENST00000568848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.69■□□□□ 0.42
USB1-214ENST00000568848 DEFB128Q7Z7B8 93 aa17.69■□□□□ 0.42
USB1-214ENST00000568848 GMCL1P1Q8NEA9 526 aa17.69■□□□□ 0.42
USB1-214ENST00000568848 SLC28A3Q9HAS3 691 aa17.69■□□□□ 0.42
USB1-214ENST00000568848 FBXO40Q9UH90 709 aa17.69■□□□□ 0.42
USB1-214ENST00000568848 FOXP2O15409 715 aa17.68■□□□□ 0.42
USB1-214ENST00000568848 RAB30Q15771 203 aa17.68■□□□□ 0.42
USB1-214ENST00000568848 PPP2R2DQ66LE6 453 aa17.68■□□□□ 0.42
USB1-214ENST00000568848 TTBK2Q6IQ55 1244 aa17.68■□□□□ 0.42
USB1-214ENST00000568848 NSMFQ6X4W1 530 aa17.68■□□□□ 0.42
USB1-214ENST00000568848 NEDD1Q8NHV4 660 aa17.68■□□□□ 0.42
USB1-214ENST00000568848 TRANK1O15050 2925 aa17.67■□□□□ 0.42
USB1-214ENST00000568848 SLC16A2P36021 539 aa17.67■□□□□ 0.42
USB1-214ENST00000568848 STAT2P52630 851 aa17.67■□□□□ 0.42
USB1-214ENST00000568848 MRPS5P82675 430 aaKnown RBP17.67■□□□□ 0.42
USB1-214ENST00000568848 PPARAQ07869 468 aa17.67■□□□□ 0.42
USB1-214ENST00000568848 ATXN2LQ8WWM7 1075 aaKnown RBP17.67■□□□□ 0.42
USB1-214ENST00000568848 AP5M1Q9H0R1 490 aa17.67■□□□□ 0.42
USB1-214ENST00000568848 IL17RBQ9NRM6 502 aa17.67■□□□□ 0.42
USB1-214ENST00000568848 PRR12Q9ULL5 1215 aa17.67■□□□□ 0.42
USB1-214ENST00000568848 PLIN4Q96Q06 1357 aa17.66■□□□□ 0.42
USB1-214ENST00000568848 SLC1A4P43007 532 aa17.66■□□□□ 0.42
USB1-214ENST00000568848 OAZ1P54368 228 aa17.66■□□□□ 0.42
USB1-214ENST00000568848 NKX3-2P78367 333 aa17.66■□□□□ 0.42
USB1-214ENST00000568848 GIMAP6Q6P9H5 292 aa17.66■□□□□ 0.42
USB1-214ENST00000568848 TMCO2Q7Z6W1 182 aaPredicted RBP17.66■□□□□ 0.42
USB1-214ENST00000568848 STAG1Q8WVM7 1258 aa17.66■□□□□ 0.42
USB1-214ENST00000568848 COPS5Q92905 334 aa17.66■□□□□ 0.42
USB1-214ENST00000568848 CYP39A1Q9NYL5 469 aa17.66■□□□□ 0.42
USB1-214ENST00000568848 STX8Q9UNK0 236 aa17.66■□□□□ 0.42
USB1-214ENST00000568848 TET1Q8NFU7 2136 aa17.66■□□□□ 0.42
USB1-214ENST00000568848 PATL2C9JE40 543 aaKnown RBP17.65■□□□□ 0.42
USB1-214ENST00000568848 NFIBO00712 420 aa17.65■□□□□ 0.42
USB1-214ENST00000568848 CA3P07451 260 aa17.65■□□□□ 0.42
USB1-214ENST00000568848 MYL3P08590 195 aa17.65■□□□□ 0.42
USB1-214ENST00000568848 SKIV2LQ15477 1246 aaKnown RBP17.65■□□□□ 0.42
USB1-214ENST00000568848 KIAA1211Q6ZU35 1233 aa17.65■□□□□ 0.42
USB1-214ENST00000568848 ALDH8A1Q9H2A2 487 aaPredicted RBP17.65■□□□□ 0.42
USB1-214ENST00000568848 CCPG1Q9ULG6 757 aa17.65■□□□□ 0.42
USB1-214ENST00000568848 SLC4A7Q9Y6M7 1214 aa17.65■□□□□ 0.42
USB1-214ENST00000568848 FRMPD2Q68DX3 1309 aaPredicted RBP17.65■□□□□ 0.42
USB1-214ENST00000568848 CHMP4BP1P59074 171 aa17.64■□□□□ 0.41
USB1-214ENST00000568848 BAATQ14032 418 aaPredicted RBP17.64■□□□□ 0.41
USB1-214ENST00000568848 CCDC96Q2M329 555 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms