RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SH2D4BQ5SQS7 431 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 RPUSD2Q8IZ73 545 aaKnown RBP13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 WHAMMQ8TF30 809 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 AATFQ9NY61 560 aaKnown RBP eCLIP13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 BCORL1Q5H9F3 1711 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 EPSTI1Q96J88 318 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 DNAI2Q9GZS0 605 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 CXorf56Q9H5V9 222 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 DAAM1Q9Y4D1 1078 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 GSDMBQ8TAX9 411 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 MRPL44Q9H9J2 332 aaKnown RBP13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 NOP53Q9NZM5 478 aaKnown RBP13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 DENND2AQ9ULE3 1009 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 PCDHB6Q9Y5E3 794 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 ARHGEF10O15013 1369 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 LRRIQ1Q96JM4 1722 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 IFNB1P01574 187 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 BCRP11274 1271 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 ARL1P40616 181 aaPredicted RBP13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 TFAP4Q01664 338 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 MTF1Q14872 753 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 PROSER3Q2NL68 480 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 REXO1Q8N1G1 1221 aaKnown RBP13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 GBP7Q8N8V2 638 aaPredicted RBP13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 BPIFA3Q9BQP9 254 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 RNF14Q9UBS8 474 aa13.6□□□□□ -0.23
CSPG4P13-202ENST00000567704 MYOM2P54296 1465 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 DDIT3P35638 169 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 ZNF658Q5TYW1 1059 aaPredicted RBP13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 SCYL3Q8IZE3 742 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 CABLES1Q8TDN4 633 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 MAGOHBQ96A72 148 aaKnown RBP13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 NAP1L4Q99733 375 aaKnown RBP13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 PHF23Q9BUL5 403 aaPredicted RBP13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 MAK16Q9BXY0 300 aaKnown RBP13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 YIPF3Q9GZM5 350 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 HDAC6Q9UBN7 1215 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 DNM3Q9UQ16 869 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 PLAAQ9Y263 795 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 PGRMC1O00264 195 aaKnown RBP13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 LONP1P36776 959 aaKnown RBP13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 DPF2Q92785 391 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 GPKOWQ92917 476 aaPredicted RBP eCLIP13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 ELAC2Q9BQ52 826 aaKnown RBP13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 PKD2L1Q9P0L9 805 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 BIN2Q9UBW5 565 aaPredicted RBP13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 RWDD2AQ9UIY3 292 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 SMCO2A6NFE2 343 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 SCG2P13521 617 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 TRAF1Q13077 416 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 LIN9Q5TKA1 542 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 MAEAQ7L5Y9 396 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 LRRC8CQ8TDW0 803 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 P2RX5Q93086 422 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 ZSCAN10Q96SZ4 725 aaPredicted RBP13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 CNOT10Q9H9A5 744 aaKnown RBP13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 PCDHA13Q9Y5I0 950 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 ADCY7P51828 1080 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 MYCT1Q8N699 235 aa13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 LARSQ9P2J5 1176 aaKnown RBP13.59□□□□□ -0.23
CSPG4P13-202ENST00000567704 M0R2C6 588 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 SASH1O94885 1247 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 POLA2Q14181 598 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 COG1Q8WTW3 980 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 PAGE5Q96GU1 130 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 SLC52A2Q9HAB3 445 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 PTPN22Q9Y2R2 807 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 USP17L12C9JPN9 530 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 USP17L21D6R901 530 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 TEX33O43247 280 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 WDR44Q5JSH3 913 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 SDR42E1Q8WUS8 393 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 DHTKD1Q96HY7 919 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 TSC22D3Q99576 134 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 ABHD10Q9NUJ1 306 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 RPAP1Q9BWH6 1393 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 FMNL1O95466 1100 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 OR52Z1P0C646 297 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 CASP1P29466 404 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 KIF11P52732 1056 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 USP14P54578 494 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 SH3BGRP55822 239 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 CTAGE3PQ8IX95 158 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 P3H4Q92791 437 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 RUNDC3BQ96NL0 473 aa13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P13-202ENST00000567704 MED23Q9ULK4 1368 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 MMP1P03956 469 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 MYO1EQ12965 1108 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 ADAM9Q13443 819 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 DDX27Q96GQ7 796 aaKnown RBP13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 NUF2Q9BZD4 464 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 SCOCQ9UIL1 159 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 SRPRBQ9Y5M8 271 aaKnown RBP13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 IL9RQ01113 521 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 TCP11X2Q5H9J9 407 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 GPBP1Q86WP2 473 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 MAIP1Q8WWC4 291 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 AP1M1Q9BXS5 423 aa13.57□□□□□ -0.24
CSPG4P13-202ENST00000567704 HSPA2P54652 639 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms