RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 DNAH12Q6ZR08 3092 aa8.11□□□□□ -1.11
SF3B3-209ENST00000567635 A0A1W2PPC1 479 aa8.1□□□□□ -1.11
SF3B3-209ENST00000567635 SOWAHBA6NEL2 793 aa8.1□□□□□ -1.11
SF3B3-209ENST00000567635 SGSM2O43147 1006 aa8.1□□□□□ -1.11
SF3B3-209ENST00000567635 DUSP11O75319 330 aaKnown RBP8.1□□□□□ -1.11
SF3B3-209ENST00000567635 GOLGA8HP0CJ92 632 aa8.1□□□□□ -1.11
SF3B3-209ENST00000567635 BMP8BP34820 402 aa8.1□□□□□ -1.11
SF3B3-209ENST00000567635 FXR1P51114 621 aaKnown RBP eCLIP8.1□□□□□ -1.116e-7■□□□□ 11.1
SF3B3-209ENST00000567635 TRDNQ13061 729 aa8.1□□□□□ -1.11
SF3B3-209ENST00000567635 BAATQ14032 418 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-209ENST00000567635 CCDC144BQ3MJ40 725 aa8.1□□□□□ -1.11
SF3B3-209ENST00000567635 NSMFQ6X4W1 530 aa8.1□□□□□ -1.11
SF3B3-209ENST00000567635 GDF15Q99988 308 aa8.1□□□□□ -1.11
SF3B3-209ENST00000567635 TSEN34Q9BSV6 310 aaKnown RBP8.1□□□□□ -1.11
SF3B3-209ENST00000567635 UBA5Q9GZZ9 404 aa8.1□□□□□ -1.11
SF3B3-209ENST00000567635 ZHX1Q9UKY1 873 aaPredicted RBP8.1□□□□□ -1.11
SF3B3-209ENST00000567635 PHF24Q9UPV7 400 aa8.1□□□□□ -1.11
SF3B3-209ENST00000567635 KIAA1217Q5T5P2 1943 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 PARP1P09874 1014 aaKnown RBP8.09□□□□□ -1.11
SF3B3-209ENST00000567635 MAGEA10P43363 369 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-209ENST00000567635 ACLYP53396 1101 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 RTP1P59025 263 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 TNFAIP2Q03169 654 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 KCNA10Q16322 511 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 ASPRV1Q53RT3 343 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 IFIT1BQ5T764 474 aaKnown RBP8.09□□□□□ -1.11
SF3B3-209ENST00000567635 C1orf53Q5VUE5 145 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 IQSEC1Q6DN90 963 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 KIAA1211Q6ZU35 1233 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 CENPQQ7L2Z9 268 aaPredicted RBP8.09□□□□□ -1.11
SF3B3-209ENST00000567635 KLHDC9Q8NEP7 349 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 MAP4K1Q92918 833 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 SPC25Q9HBM1 224 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 ADD3Q9UEY8 706 aaKnown RBP8.09□□□□□ -1.11
SF3B3-209ENST00000567635 PRKAG2Q9UGJ0 569 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 ATP11BQ9Y2G3 1177 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 GTF3C3Q9Y5Q9 886 aa8.09□□□□□ -1.11
SF3B3-209ENST00000567635 TNKSO95271 1327 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 WDR19Q8NEZ3 1342 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 LOC102724159A0A0B4J2E5 919 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 PTPDC1A2A3K4 754 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 E7EWF7 191 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 NFIBO00712 420 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 ADAMTS4O75173 837 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 CYP21A2P08686 494 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 C6orf222P0C671 652 aaPredicted RBP8.08□□□□□ -1.12
SF3B3-209ENST00000567635 GJA9P57773 515 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 SNX17Q15036 470 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 PWP2Q15269 919 aaKnown RBP8.08□□□□□ -1.12
SF3B3-209ENST00000567635 SEC23AQ15436 765 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 GNASQ5JWF2 1037 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 CCSAPQ6IQ19 270 aaPredicted RBP8.08□□□□□ -1.12
SF3B3-209ENST00000567635 RNF207Q6ZRF8 634 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 NOL8Q76FK4 1167 aaKnown RBP8.08□□□□□ -1.12
SF3B3-209ENST00000567635 CYB5R4Q7L1T6 521 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 ADGRF4Q8IZF3 695 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 PCSK9Q8NBP7 692 aaKnown RBP8.08□□□□□ -1.12
SF3B3-209ENST00000567635 RGS22Q8NE09 1264 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 MORC4Q8TE76 937 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 NUP133Q8WUM0 1156 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 CLEC4DQ8WXI8 215 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 LENG1Q96BZ8 264 aaPredicted RBP8.08□□□□□ -1.12
SF3B3-209ENST00000567635 LBHD1Q9BQE6 289 aaPredicted RBP8.08□□□□□ -1.12
SF3B3-209ENST00000567635 UBE2OQ9C0C9 1292 aaKnown RBP8.08□□□□□ -1.12
SF3B3-209ENST00000567635 MAF1Q9H063 256 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 KATNBL1Q9H079 304 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 UPF3AQ9H1J1 476 aaKnown RBP8.08□□□□□ -1.12
SF3B3-209ENST00000567635 CPVLQ9H3G5 476 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 VAT1LQ9HCJ6 419 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 SSUH2Q9Y2M2 353 aa8.08□□□□□ -1.12
SF3B3-209ENST00000567635 ASTN1O14525 1302 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 SYNRGQ9UMZ2 1314 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 A0A1W2PQ45 241 aaPredicted RBP8.07□□□□□ -1.12
SF3B3-209ENST00000567635 A0A1W2PQY0 241 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 ERICH2A1L162 156 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 MOXD2PA6NHM9 499 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 B4DLN1 442 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 KLRF2D3W0D1 207 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 IFIT3O14879 490 aaKnown RBP8.07□□□□□ -1.12
SF3B3-209ENST00000567635 ADCY6O43306 1168 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 DHX16O60231 1041 aaKnown RBP8.07□□□□□ -1.12
SF3B3-209ENST00000567635 CALML3P27482 149 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 CST5P28325 142 aaPredicted RBP8.07□□□□□ -1.12
SF3B3-209ENST00000567635 MRPL12P52815 198 aaKnown RBP8.07□□□□□ -1.12
SF3B3-209ENST00000567635 NKX3-2P78367 333 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 MDM2Q00987 491 aaPredicted RBP8.07□□□□□ -1.12
SF3B3-209ENST00000567635 TLE2Q04725 743 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 SART3Q15020 963 aaKnown RBP8.07□□□□□ -1.12
SF3B3-209ENST00000567635 USH1GQ495M9 461 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 TRIM60Q495X7 471 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 TAPT1Q6NXT6 567 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 EEPD1Q7L9B9 569 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 RALYLQ86SE5 291 aaKnown RBP8.07□□□□□ -1.12
SF3B3-209ENST00000567635 NCOA7Q8NI08 942 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 VTI1AQ96AJ9 217 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 PURBQ96QR8 312 aaKnown RBP8.07□□□□□ -1.12
SF3B3-209ENST00000567635 MPHOSPH6Q99547 160 aaKnown RBP8.07□□□□□ -1.12
SF3B3-209ENST00000567635 AP5M1Q9H0R1 490 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 VTA1Q9NP79 307 aa8.07□□□□□ -1.12
SF3B3-209ENST00000567635 Q9Y3F1 56 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms