RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 PNMA2Q9UL42 364 aa14.45□□□□□ -0.1
RNF40-211ENST00000567365 CTDP1Q9Y5B0 961 aaPredicted RBP14.45□□□□□ -0.1
RNF40-211ENST00000567365 SLC12A7Q9Y666 1083 aa14.45□□□□□ -0.1
RNF40-211ENST00000567365 NFIBO00712 420 aa14.44□□□□□ -0.1
RNF40-211ENST00000567365 PLEKHA8P1O95397 391 aa14.44□□□□□ -0.1
RNF40-211ENST00000567365 PGK2P07205 417 aa14.44□□□□□ -0.1
RNF40-211ENST00000567365 ALAS1P13196 640 aa14.44□□□□□ -0.1
RNF40-211ENST00000567365 KCTD2Q14681 263 aa14.44□□□□□ -0.1
RNF40-211ENST00000567365 NFXL1Q6ZNB6 911 aa14.44□□□□□ -0.1
RNF40-211ENST00000567365 TMTC3Q6ZXV5 915 aa14.44□□□□□ -0.1
RNF40-211ENST00000567365 SRBD1Q8N5C6 995 aaKnown RBP14.44□□□□□ -0.1
RNF40-211ENST00000567365 MAML3Q96JK9 1138 aa14.44□□□□□ -0.1
RNF40-211ENST00000567365 LZTS2Q9BRK4 669 aa14.44□□□□□ -0.1
RNF40-211ENST00000567365 UPF3BQ9BZI7 483 aaKnown RBP14.44□□□□□ -0.1
RNF40-211ENST00000567365 ALDH8A1Q9H2A2 487 aaPredicted RBP14.44□□□□□ -0.1
RNF40-211ENST00000567365 CWC22Q9HCG8 908 aaKnown RBP14.44□□□□□ -0.1
RNF40-211ENST00000567365 CYP46A1Q9Y6A2 500 aa14.44□□□□□ -0.1
RNF40-211ENST00000567365 ASTN1O14525 1302 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 KLF18A0A0U1RQI7 1052 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 OPLAHO14841 1288 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 ZBTB5O15062 677 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 KIF5BP33176 963 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 GNAQP50148 359 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 GHRHRQ02643 423 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 APOBRQ0VD83 1088 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 MAMDC4Q6UXC1 1216 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 ZNF467Q7Z7K2 595 aaPredicted RBP14.43□□□□□ -0.1
RNF40-211ENST00000567365 DPP9Q86TI2 863 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 MICU3Q86XE3 530 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 RAB11FIP4Q86YS3 637 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 RGS22Q8NE09 1264 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 CTCFLQ8NI51 663 aaPredicted RBP14.43□□□□□ -0.1
RNF40-211ENST00000567365 BRF1Q92994 677 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 PIGSQ96S52 555 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 KIF2CQ99661 725 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 MAF1Q9H063 256 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 VAT1LQ9HCJ6 419 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 PAK6Q9NQU5 681 aaPredicted RBP14.43□□□□□ -0.1
RNF40-211ENST00000567365 HOMER2Q9NSB8 354 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 CYP39A1Q9NYL5 469 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 PDE4DIPQ5VU43 2346 aa14.43□□□□□ -0.1
RNF40-211ENST00000567365 ZBTB43O43298 467 aa14.42□□□□□ -0.1
RNF40-211ENST00000567365 CCL5P13501 91 aa14.42□□□□□ -0.1
RNF40-211ENST00000567365 CDC27P30260 824 aa14.42□□□□□ -0.1
RNF40-211ENST00000567365 CACNB2Q08289 660 aaPredicted RBP14.42□□□□□ -0.1
RNF40-211ENST00000567365 FBXO11Q86XK2 927 aa14.42□□□□□ -0.1
RNF40-211ENST00000567365 MCM3APO60318 1980 aa14.42□□□□□ -0.1
RNF40-211ENST00000567365 PFASO15067 1338 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 ABCB11O95342 1321 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 CNTNAP5Q8WYK1 1306 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 PNMA6FA0A0J9YX94 578 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 SOWAHBA6NEL2 793 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 PRKAR2AP13861 404 aaKnown RBP14.41□□□□□ -0.1
RNF40-211ENST00000567365 CYP2C19P33261 490 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 SLC4A3P48751 1232 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 UBXN2AP68543 259 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 NTRK3Q16288 839 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 CCDC144CPQ8IYA2 1237 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 CMTR1Q8N1G2 835 aaKnown RBP14.41□□□□□ -0.1
RNF40-211ENST00000567365 ANKRD35Q8N283 1001 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 MSL3Q8N5Y2 521 aaKnown RBP14.41□□□□□ -0.1
RNF40-211ENST00000567365 TRPV1Q8NER1 839 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 TINF2Q9BSI4 451 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 AMNQ9BXJ7 453 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 UNC93B1Q9H1C4 597 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 RBM28Q9NW13 759 aaKnown RBP14.41□□□□□ -0.1
RNF40-211ENST00000567365 LRRC37A2A6NM11 1700 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 RPTORQ8N122 1335 aa14.41□□□□□ -0.1
RNF40-211ENST00000567365 GJB1P08034 283 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 CYBAP13498 195 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 PDIA3P30101 505 aaKnown RBP14.4□□□□□ -0.1
RNF40-211ENST00000567365 RBM25P49756 843 aaKnown RBP14.4□□□□□ -0.1
RNF40-211ENST00000567365 CNTN2Q02246 1040 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 BAATQ14032 418 aaPredicted RBP14.4□□□□□ -0.1
RNF40-211ENST00000567365 PPP2R5BQ15173 497 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 RTN1Q16799 776 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 USH1GQ495M9 461 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 SYNE3Q6ZMZ3 975 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 MORC4Q8TE76 937 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 TBC1D5Q92609 795 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 DDX11Q96FC9 970 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 KATNBL1Q9H079 304 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 SLC5A4Q9NY91 659 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 FRMPD3Q5JV73 1810 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 SYNGAP1Q96PV0 1343 aa14.4□□□□□ -0.1
RNF40-211ENST00000567365 GOLGA8AA7E2F4 631 aa14.39□□□□□ -0.11
RNF40-211ENST00000567365 GOLGA8BA8MQT2 603 aa14.39□□□□□ -0.11
RNF40-211ENST00000567365 POTEB2H3BUK9 544 aa14.39□□□□□ -0.11
RNF40-211ENST00000567365 DHX16O60231 1041 aaKnown RBP14.39□□□□□ -0.11
RNF40-211ENST00000567365 SNAI1O95863 264 aaPredicted RBP14.39□□□□□ -0.11
RNF40-211ENST00000567365 ADD1P35611 737 aaKnown RBP14.39□□□□□ -0.11
RNF40-211ENST00000567365 RPS6P62753 249 aaKnown RBP14.39□□□□□ -0.11
RNF40-211ENST00000567365 MFSD14CQ5VZR4 134 aa14.39□□□□□ -0.11
RNF40-211ENST00000567365 SLC30A10Q6XR72 485 aa14.39□□□□□ -0.11
RNF40-211ENST00000567365 HOMER1Q86YM7 354 aa14.39□□□□□ -0.11
RNF40-211ENST00000567365 SHISA4Q96DD7 197 aa14.39□□□□□ -0.11
RNF40-211ENST00000567365 ZNF274Q96GC6 653 aaPredicted RBP14.39□□□□□ -0.11
RNF40-211ENST00000567365 PURBQ96QR8 312 aaKnown RBP14.39□□□□□ -0.11
RNF40-211ENST00000567365 CRISPLD2Q9H0B8 497 aa14.39□□□□□ -0.11
RNF40-211ENST00000567365 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms