RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 TAF6LQ9Y6J9 622 aa15.62■□□□□ 0.09
CLK3-218ENST00000566926 PSMA5P28066 241 aa15.61■□□□□ 0.09
CLK3-218ENST00000566926 TRAF1Q13077 416 aa15.61■□□□□ 0.09
CLK3-218ENST00000566926 CHST3Q7LGC8 479 aa15.61■□□□□ 0.09
CLK3-218ENST00000566926 ADGRF4Q8IZF3 695 aa15.61■□□□□ 0.09
CLK3-218ENST00000566926 FAM133AQ8N9E0 248 aa15.61■□□□□ 0.09
CLK3-218ENST00000566926 ARRDC4Q8NCT1 418 aa15.61■□□□□ 0.09
CLK3-218ENST00000566926 TRPV1Q8NER1 839 aa15.61■□□□□ 0.09
CLK3-218ENST00000566926 IGDCC4Q8TDY8 1250 aa15.61■□□□□ 0.09
CLK3-218ENST00000566926 PAWRQ96IZ0 340 aaKnown RBP15.61■□□□□ 0.09
CLK3-218ENST00000566926 KIF2CQ99661 725 aa15.61■□□□□ 0.09
CLK3-218ENST00000566926 TM6SF1Q9BZW5 370 aa15.61■□□□□ 0.09
CLK3-218ENST00000566926 ASB14A6NK59 587 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 KLRF2D3W0D1 207 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 PRC1O43663 620 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 MCM2P49736 904 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 ANTXR2P58335 489 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 GRM4Q14833 912 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 CDC37Q16543 378 aaPredicted RBP15.6■□□□□ 0.09
CLK3-218ENST00000566926 MUM1L1Q5H9M0 696 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 PRAMEF19Q5SWL8 479 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 PRPF38BQ5VTL8 546 aaKnown RBP15.6■□□□□ 0.09
CLK3-218ENST00000566926 NSMFQ6X4W1 530 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 DPF3Q92784 378 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 MAP3K14Q99558 947 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 ABHD16BQ9H3Z7 469 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 C11orf49Q9H6J7 331 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 CYP39A1Q9NYL5 469 aa15.6■□□□□ 0.09
CLK3-218ENST00000566926 ADD3Q9UEY8 706 aaKnown RBP15.6■□□□□ 0.09
CLK3-218ENST00000566926 CEP290O15078 2479 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 MKI67P46013 3256 aaKnown RBP15.59■□□□□ 0.09
CLK3-218ENST00000566926 LCTP09848 1927 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 LOC102724159A0A0B4J2E5 919 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 PALM3A6NDB9 673 aaPredicted RBP15.59■□□□□ 0.09
CLK3-218ENST00000566926 CCDC69A6NI79 296 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 RARBP10826 455 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 AKR1A1P14550 325 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 KIF5BP33176 963 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 CNTN2Q02246 1040 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 PWP2Q15269 919 aaKnown RBP15.59■□□□□ 0.09
CLK3-218ENST00000566926 NFXL1Q6ZNB6 911 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 HSCBQ8IWL3 235 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 NEK1Q96PY6 1258 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 MPHOSPH6Q99547 160 aaKnown RBP15.59■□□□□ 0.09
CLK3-218ENST00000566926 VAT1LQ9HCJ6 419 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.59■□□□□ 0.09
CLK3-218ENST00000566926 MAD2L2Q9UI95 211 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 FAM184BQ9ULE4 1060 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 ABCB11O95342 1321 aa15.59■□□□□ 0.09
CLK3-218ENST00000566926 ALPK3Q96L96 1907 aa15.58■□□□□ 0.09
CLK3-218ENST00000566926 PTPDC1A2A3K4 754 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 B4DLN1 442 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 DDAH1O94760 285 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 HMGB1P09429 215 aaKnown RBP15.58■□□□□ 0.08
CLK3-218ENST00000566926 CALM1P0DP23 149 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 CALM2P0DP24 149 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 CALM3P0DP25 149 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 LIFRP42702 1097 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 MRPL12P52815 198 aaKnown RBP15.58■□□□□ 0.08
CLK3-218ENST00000566926 TROAPQ12815 778 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 ACVR2BQ13705 512 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 USH1GQ495M9 461 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 RNF207Q6ZRF8 634 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 ARMCX2Q7L311 632 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 FBXO11Q86XK2 927 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 MCF2L2Q86YR7 1114 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 STAG2Q8N3U4 1231 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 RGS22Q8NE09 1264 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 CTCFLQ8NI51 663 aaPredicted RBP15.58■□□□□ 0.08
CLK3-218ENST00000566926 CPVLQ9H3G5 476 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 JMJD4Q9H9V9 463 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 LY9Q9HBG7 655 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 ZHX1Q9UKY1 873 aaPredicted RBP15.58■□□□□ 0.08
CLK3-218ENST00000566926 MRPL11Q9Y3B7 192 aaKnown RBP15.58■□□□□ 0.08
CLK3-218ENST00000566926 SNX14Q9Y5W7 946 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 NR2E3Q9Y5X4 410 aa15.58■□□□□ 0.08
CLK3-218ENST00000566926 KBTBD13C9JR72 458 aa15.57■□□□□ 0.08
CLK3-218ENST00000566926 DNM1LO00429 736 aa15.57■□□□□ 0.08
CLK3-218ENST00000566926 SH2B2O14492 632 aaPredicted RBP15.57■□□□□ 0.08
CLK3-218ENST00000566926 SNAI1O95863 264 aaPredicted RBP15.57■□□□□ 0.08
CLK3-218ENST00000566926 ZNF865P0CJ78 1059 aaPredicted RBP15.57■□□□□ 0.08
CLK3-218ENST00000566926 GNAQP50148 359 aa15.57■□□□□ 0.08
CLK3-218ENST00000566926 BAATQ14032 418 aaPredicted RBP15.57■□□□□ 0.08
CLK3-218ENST00000566926 QRICH1Q2TAL8 776 aa15.57■□□□□ 0.08
CLK3-218ENST00000566926 SYNE3Q6ZMZ3 975 aa15.57■□□□□ 0.08
CLK3-218ENST00000566926 CCDC144CPQ8IYA2 1237 aa15.57■□□□□ 0.08
CLK3-218ENST00000566926 ZNF654Q8IZM8 581 aa15.57■□□□□ 0.08
CLK3-218ENST00000566926 DIS3LQ8TF46 1054 aaKnown RBP15.57■□□□□ 0.08
CLK3-218ENST00000566926 NUP133Q8WUM0 1156 aa15.57■□□□□ 0.08
CLK3-218ENST00000566926 FGD4Q96M96 766 aa15.57■□□□□ 0.08
CLK3-218ENST00000566926 AMNQ9BXJ7 453 aa15.57■□□□□ 0.08
CLK3-218ENST00000566926 SOWAHBA6NEL2 793 aa15.56■□□□□ 0.08
CLK3-218ENST00000566926 NFIBO00712 420 aa15.56■□□□□ 0.08
CLK3-218ENST00000566926 ZBTB5O15062 677 aa15.56■□□□□ 0.08
CLK3-218ENST00000566926 EVI5O60447 810 aa15.56■□□□□ 0.08
CLK3-218ENST00000566926 MNX1P50219 401 aaPredicted RBP15.56■□□□□ 0.08
CLK3-218ENST00000566926 DHX32Q7L7V1 743 aaKnown RBP15.56■□□□□ 0.08
CLK3-218ENST00000566926 RNF180Q86T96 592 aa15.56■□□□□ 0.08
CLK3-218ENST00000566926 CLEC4DQ8WXI8 215 aa15.56■□□□□ 0.08
CLK3-218ENST00000566926 LZTS2Q9BRK4 669 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms