RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ASXL2Q76L83 1435 aa6.9□□□□□ -1.31
CNOT1-209ENST00000566240 IGF2BP3O00425 579 aaKnown RBP eCLIP6.89□□□□□ -1.31
CNOT1-209ENST00000566240 AQP7O14520 342 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 RASGRP1O95267 797 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 CRTAMO95727 393 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 CD3EP07766 207 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 JMJD7P0C870 316 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 ZNF865P0CJ78 1059 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-209ENST00000566240 NOP2P46087 812 aaKnown RBP6.89□□□□□ -1.31
CNOT1-209ENST00000566240 TNK2Q07912 1038 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 STRN3Q13033 797 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 CLEC16AQ2KHT3 1053 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 CFAP100Q494V2 611 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 PKN3Q6P5Z2 889 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 CRTC3Q6UUV7 619 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 KCNT2Q6UVM3 1135 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 UBE2R2Q712K3 238 aaPredicted RBP6.89□□□□□ -1.31
CNOT1-209ENST00000566240 DAGLBQ8NCG7 672 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 PIWIL2Q8TC59 973 aaKnown RBP6.89□□□□□ -1.31
CNOT1-209ENST00000566240 GATA6Q92908 595 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 TBC1D32Q96NH3 1257 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 HDAC8Q9BY41 377 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 GPRC5CQ9NQ84 441 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 PCDHA9Q9Y5H5 950 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 ST14Q9Y5Y6 855 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 CAPN6Q9Y6Q1 641 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 WASHC2CQ9Y4E1 1318 aa6.89□□□□□ -1.31
CNOT1-209ENST00000566240 C2orf71A6NGG8 1288 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 B4E1Z4 1266 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 STXBP3O00186 592 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 AURKAO14965 403 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 KPNA6O60684 536 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 APPP05067 770 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 THBDP07204 575 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 ADMP35318 185 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 GATA4P43694 442 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 GUCY2FP51841 1108 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 DHCR24Q15392 516 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 CYP27C1Q4G0S4 372 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 ZMYM1Q5SVZ6 1142 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 CCDC181Q5TID7 509 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 ZAR1Q86SH2 424 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 MFSD4AQ8N468 514 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 ZNF655Q8N720 491 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-209ENST00000566240 FRS2Q8WU20 508 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 FCRL3Q96P31 734 aaPredicted RBP6.88□□□□□ -1.31
CNOT1-209ENST00000566240 GPR62Q9BZJ7 368 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 BACE2Q9Y5Z0 518 aa6.88□□□□□ -1.31
CNOT1-209ENST00000566240 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
CNOT1-209ENST00000566240 SRFP11831 508 aa6.87□□□□□ -1.31
CNOT1-209ENST00000566240 NAT1P18440 290 aa6.87□□□□□ -1.31
CNOT1-209ENST00000566240 GUCY1A3Q02108 690 aa6.87□□□□□ -1.31
CNOT1-209ENST00000566240 SEPT7Q16181 437 aaKnown RBP6.87□□□□□ -1.31
CNOT1-209ENST00000566240 ACBD5Q5T8D3 534 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-209ENST00000566240 CDCA2Q69YH5 1023 aaPredicted RBP6.87□□□□□ -1.31
CNOT1-209ENST00000566240 PPIL6Q8IXY8 311 aa6.87□□□□□ -1.31
CNOT1-209ENST00000566240 NPLOC4Q8TAT6 608 aa6.87□□□□□ -1.31
CNOT1-209ENST00000566240 WDR66Q8TBY9 1149 aa6.87□□□□□ -1.31
CNOT1-209ENST00000566240 THRAP3Q9Y2W1 955 aaKnown RBP6.87□□□□□ -1.31
CNOT1-209ENST00000566240 PCDHA8Q9Y5H6 950 aa6.87□□□□□ -1.31
CNOT1-209ENST00000566240 NPFFR2Q9Y5X5 522 aa6.87□□□□□ -1.31
CNOT1-209ENST00000566240 PHLDB1Q86UU1 1377 aa6.86□□□□□ -1.31
CNOT1-209ENST00000566240 HMX2A2RU54 273 aa6.86□□□□□ -1.31
CNOT1-209ENST00000566240 GNAT3A8MTJ3 354 aa6.86□□□□□ -1.31
CNOT1-209ENST00000566240 MEFVO15553 781 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-209ENST00000566240 IFNGR1P15260 489 aa6.86□□□□□ -1.31
CNOT1-209ENST00000566240 VAV1P15498 845 aa6.86□□□□□ -1.31
CNOT1-209ENST00000566240 SEPHS1P49903 392 aa6.86□□□□□ -1.31
CNOT1-209ENST00000566240 ZCCHC8Q6NZY4 707 aaKnown RBP6.86□□□□□ -1.31
CNOT1-209ENST00000566240 RSPO2Q6UXX9 243 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-209ENST00000566240 IFNL3Q8IZI9 196 aa6.86□□□□□ -1.31
CNOT1-209ENST00000566240 TCTN2Q96GX1 697 aa6.86□□□□□ -1.31
CNOT1-209ENST00000566240 WNK4Q96J92 1243 aa6.86□□□□□ -1.31
CNOT1-209ENST00000566240 ZFYVE21Q9BQ24 234 aa6.86□□□□□ -1.31
CNOT1-209ENST00000566240 PHF20Q9BVI0 1012 aa6.86□□□□□ -1.31
CNOT1-209ENST00000566240 SSBP4Q9BWG4 385 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-209ENST00000566240 SLC12A9Q9BXP2 914 aa6.86□□□□□ -1.31
CNOT1-209ENST00000566240 DUSP15Q9H1R2 295 aaPredicted RBP6.86□□□□□ -1.31
CNOT1-209ENST00000566240 FAM155AB1AL88 458 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-209ENST00000566240 ARNTLO00327 626 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 BRINP1O60477 761 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 KCNA6P17658 529 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 BMP8BP34820 402 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 GPR85P60893 370 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 CYP27A1Q02318 531 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 TESK1Q15569 626 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 RSPO4Q2I0M5 234 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-209ENST00000566240 HSP90AB2PQ58FF8 381 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 PIK3R6Q5UE93 754 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 RNF219Q5W0B1 726 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-209ENST00000566240 E4F1Q66K89 784 aaPredicted RBP6.85□□□□□ -1.31
CNOT1-209ENST00000566240 MTDHQ86UE4 582 aaKnown RBP6.85□□□□□ -1.31
CNOT1-209ENST00000566240 FMNL3Q8IVF7 1028 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 SHISA5Q8N114 240 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 TRIT1Q9H3H1 467 aaKnown RBP6.85□□□□□ -1.31
CNOT1-209ENST00000566240 C7orf69Q9H7B7 122 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 GPR27Q9NS67 375 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 GPATCH2Q9NW75 528 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 SLC5A4Q9NY91 659 aa6.85□□□□□ -1.31
CNOT1-209ENST00000566240 SAMD15Q9P1V8 674 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms