RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 NAT1P18440 290 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 RXRGP48443 463 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 RASGRP2Q7LDG7 609 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 TBC1D1Q86TI0 1168 aaPredicted RBP12.3□□□□□ -0.44
UBFD1-205ENST00000566136 GALNT12Q8IXK2 581 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 TRIM22Q8IYM9 498 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 ANTXR1Q9H6X2 564 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 VTA1Q9NP79 307 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 STRIP2Q9ULQ0 834 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 SYNPO2Q9UMS6 1093 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 GPR52Q9Y2T5 361 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 RREB1Q92766 1687 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 LRP5O75197 1615 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 PTPRCP08575 1304 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 ATP10DQ9P241 1426 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 MT-CO1P00395 513 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 CCNFP41002 786 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 BPIFB3P59826 476 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 G3BP1Q13283 466 aaKnown RBP eCLIP12.3□□□□□ -0.44
UBFD1-205ENST00000566136 ZNF460Q14592 562 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 SLC45A4Q5BKX6 768 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 RC3H1Q5TC82 1133 aaKnown RBP12.3□□□□□ -0.44
UBFD1-205ENST00000566136 C16orf71Q8IYS4 520 aaPredicted RBP12.3□□□□□ -0.44
UBFD1-205ENST00000566136 ZNF496Q96IT1 587 aaPredicted RBP12.3□□□□□ -0.44
UBFD1-205ENST00000566136 TMEM74Q96NL1 305 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 KIF24Q5T7B8 1368 aa12.3□□□□□ -0.44
UBFD1-205ENST00000566136 NUP188Q5SRE5 1749 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 PPP1R12BO60237 982 aaPredicted RBP12.29□□□□□ -0.44
UBFD1-205ENST00000566136 CFHP08603 1231 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 EPHA4P54764 986 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 PPP2R5BQ15173 497 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 CEP85Q6P2H3 762 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 MILR1Q7Z6M3 343 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 PI4K2BQ8TCG2 481 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 RSAD1Q9HA92 442 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 GNAT3A8MTJ3 354 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 GARTP22102 1010 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 SNX16P57768 344 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 PTK2Q05397 1052 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 LAMC2Q13753 1193 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 BNC2Q6ZN30 1099 aaPredicted RBP12.29□□□□□ -0.44
UBFD1-205ENST00000566136 LMNTD2Q8IXW0 634 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 ANKRD44Q8N8A2 993 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 EXOC2Q96KP1 924 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 DCTPP1Q9H773 170 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 ACAD8Q9UKU7 415 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 PCDHGA4Q9Y5G9 962 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 RTL1A6NKG5 1358 aa12.29□□□□□ -0.44
UBFD1-205ENST00000566136 GPR39O43194 453 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 ASGR2P07307 311 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 KRT20P35900 424 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 NBPF14Q5TI25 921 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 SLC41A1Q8IVJ1 513 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 OTUD7AQ8TE49 926 aaPredicted RBP12.28□□□□□ -0.44
UBFD1-205ENST00000566136 IP6K1Q92551 441 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 CPNE3O75131 537 aaKnown RBP12.28□□□□□ -0.44
UBFD1-205ENST00000566136 PF4P02776 101 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 GSPT1P15170 499 aaKnown RBP12.28□□□□□ -0.44
UBFD1-205ENST00000566136 TYRP1P17643 537 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 SCNN1DP51172 638 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 ODF1Q14990 250 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 SPOCD1Q6ZMY3 1216 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 IL17REQ8NFR9 667 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 MGARPQ8TDB4 240 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 RHOVQ96L33 236 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 ARHGAP9Q9BRR9 750 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 DHRS4Q9BTZ2 278 aa12.28□□□□□ -0.44
UBFD1-205ENST00000566136 ERICH4A6NGS2 130 aa12.27□□□□□ -0.45
UBFD1-205ENST00000566136 PLSCR1O15162 318 aa12.27□□□□□ -0.45
UBFD1-205ENST00000566136 IL2RBP14784 551 aa12.27□□□□□ -0.45
UBFD1-205ENST00000566136 FXR2P51116 673 aaKnown RBP eCLIP12.27□□□□□ -0.45
UBFD1-205ENST00000566136 ZNF131P52739 623 aa12.27□□□□□ -0.45
UBFD1-205ENST00000566136 ZNF280AP59817 542 aaPredicted RBP12.27□□□□□ -0.45
UBFD1-205ENST00000566136 GALNT5Q7Z7M9 940 aa12.27□□□□□ -0.45
UBFD1-205ENST00000566136 DZIP3Q86Y13 1208 aaKnown RBP12.27□□□□□ -0.45
UBFD1-205ENST00000566136 APPL2Q8NEU8 664 aa12.27□□□□□ -0.45
UBFD1-205ENST00000566136 LUC7LQ9NQ29 371 aaKnown RBP12.27□□□□□ -0.45
UBFD1-205ENST00000566136 CDC23Q9UJX2 597 aa12.27□□□□□ -0.45
UBFD1-205ENST00000566136 TNS2Q63HR2 1409 aa12.27□□□□□ -0.45
UBFD1-205ENST00000566136 PABPN1LA6NDY0 278 aaKnown RBP12.27□□□□□ -0.45
UBFD1-205ENST00000566136 FAM155AB1AL88 458 aaPredicted RBP12.27□□□□□ -0.45
UBFD1-205ENST00000566136 MTHFD1P11586 935 aaKnown RBP12.27□□□□□ -0.45
UBFD1-205ENST00000566136 APBA1Q02410 837 aa12.27□□□□□ -0.45
UBFD1-205ENST00000566136 NCOA5Q9HCD5 579 aaKnown RBP12.27□□□□□ -0.45
UBFD1-205ENST00000566136 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.27□□□□□ -0.45
UBFD1-205ENST00000566136 MAP3K5Q99683 1374 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 EYA2O00167 538 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 BCL9O00512 1426 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 SLC5A1P13866 664 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 MCM4P33991 863 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 SFSWAPQ12872 951 aaKnown RBP12.26□□□□□ -0.45
UBFD1-205ENST00000566136 GRIN2CQ14957 1233 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 NBPF9Q3BBW0 867 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 DESI1Q6ICB0 168 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 FRS2Q8WU20 508 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 ACSBG1Q96GR2 724 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 STK31Q9BXU1 1019 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 NLRC4Q9NPP4 1024 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 AFG3L2Q9Y4W6 797 aa12.26□□□□□ -0.45
UBFD1-205ENST00000566136 PCDHGB6Q9Y5F9 930 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms