RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 DIS3Q9Y2L1 958 aaKnown RBP12.48□□□□□ -0.41
NSMCE1-211ENST00000566087 ZNF236Q9UL36 1845 aa12.48□□□□□ -0.41
NSMCE1-211ENST00000566087 SEPT4O43236 478 aa12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 REC8O95072 547 aa12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 FOSL2P15408 326 aa12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 SLC4A3P48751 1232 aa12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 EPHB4P54760 987 aa12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 PTH1RQ03431 593 aa12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 ASPRV1Q53RT3 343 aa12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 OLFML2BQ68BL8 750 aa12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 BTNL9Q6UXG8 535 aa12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 KCTD1Q719H9 257 aa12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 ANKRD35Q8N283 1001 aa12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 PNMA1Q8ND90 353 aa12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 ZNF214Q9UL59 606 aaPredicted RBP12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 RBM8AQ9Y5S9 174 aaKnown RBP12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 A0A0G2JMZ2 1700 aa12.47□□□□□ -0.41
NSMCE1-211ENST00000566087 NEDD4P46934 1319 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 E7EWF7 191 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 IFIT3O14879 490 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 CYP21A2P08686 494 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 SMAD3P84022 425 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 TLE2Q04725 743 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 KRT32Q14532 448 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 SNX17Q15036 470 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 LRRC41Q15345 812 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 MSL3Q8N5Y2 521 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 ZKSCAN3Q9BRR0 538 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 C22orf23Q9BZE7 217 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 MAF1Q9H063 256 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 RAVER2Q9HCJ3 691 aaKnown RBP12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 GPCPD1Q9NPB8 672 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 PRDM6Q9NQX0 595 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 NRBP1Q9UHY1 535 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 PRR12Q9ULL5 1215 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 TACC3Q9Y6A5 838 aa12.46□□□□□ -0.41
NSMCE1-211ENST00000566087 TNKSO95271 1327 aa12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 EPB41L2O43491 1005 aaKnown RBP12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 PARP1P09874 1014 aaKnown RBP12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 PDHBP11177 359 aa12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 MCM5P33992 734 aa12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 ZNF543Q08ER8 600 aa12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 WTAPQ15007 396 aa12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 SYDE2Q5VT97 1194 aa12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 CATIPQ7Z7H3 387 aa12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 ENAHQ8N8S7 591 aaPredicted RBP12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 REPS2Q8NFH8 660 aa12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 MAML3Q96JK9 1138 aa12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 RNPC3Q96LT9 517 aaKnown RBP12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 MPHOSPH6Q99547 160 aaKnown RBP12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 ACAD9Q9H845 621 aa12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 ZNFX1Q9P2E3 1918 aaKnown RBP12.45□□□□□ -0.42
NSMCE1-211ENST00000566087 SMCHD1A6NHR9 2005 aa12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 B4DLN1 442 aa12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 PQBP1O60828 265 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 ICAM1P05362 532 aa12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 HMGB1P09429 215 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 SNHG28P0DPA3 235 aa12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 MRPL12P52815 198 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 USP38Q8NB14 1042 aa12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 LENG1Q96BZ8 264 aaPredicted RBP12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 TMEM87BQ96K49 555 aa12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 TBC1D32Q96NH3 1257 aa12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 TRERF1Q96PN7 1200 aa12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 USP26Q9BXU7 913 aa12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 LSG1Q9H089 658 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 CCPG1Q9ULG6 757 aa12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 CNPY2Q9Y2B0 182 aa12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 COL11A1P12107 1806 aaPredicted RBP12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 LAMA4Q16363 1823 aa12.44□□□□□ -0.42
NSMCE1-211ENST00000566087 MUC3AQ02505 3323 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 DHX16O60231 1041 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 PGK1P00558 417 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 PGK2P07205 417 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 CLTBP09497 229 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 ALAS1P13196 640 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 TAL1P17542 331 aaPredicted RBP12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 ANP32AP39687 249 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 RBM25P49756 843 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 GRIN2CQ14957 1233 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 NECTIN1Q15223 517 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 TMEM67Q5HYA8 995 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 CREB3L3Q68CJ9 461 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 SYNE3Q6ZMZ3 975 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 ZNF467Q7Z7K2 595 aaPredicted RBP12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 CHMP4CQ96CF2 233 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 IL25Q9H293 177 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 RANBP17Q9H2T7 1088 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 XPNPEP3Q9NQH7 507 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 ADD3Q9UEY8 706 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 PARP14Q460N5 1801 aa12.43□□□□□ -0.42
NSMCE1-211ENST00000566087 PLXNA1Q9UIW2 1896 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 FRMPD2Q68DX3 1309 aaPredicted RBP12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 CCDC69A6NI79 296 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 ASB14A6NK59 587 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 SLC27A2O14975 620 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 CALM1P0DP23 149 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 CALM2P0DP24 149 aa12.42□□□□□ -0.42
NSMCE1-211ENST00000566087 CALM3P0DP25 149 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms