RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 TMEM67Q5HYA8 995 aa14.34□□□□□ -0.11
SPG7-211ENST00000565370 CCDC144CPQ8IYA2 1237 aa14.34□□□□□ -0.11
SPG7-211ENST00000565370 LSG1Q9H089 658 aaKnown RBP14.34□□□□□ -0.11
SPG7-211ENST00000565370 SPC25Q9HBM1 224 aa14.34□□□□□ -0.11
SPG7-211ENST00000565370 ABCB11O95342 1321 aa14.34□□□□□ -0.11
SPG7-211ENST00000565370 LOC102724159A0A0B4J2E5 919 aa14.33□□□□□ -0.12
SPG7-211ENST00000565370 ZNF865P0CJ78 1059 aaPredicted RBP14.33□□□□□ -0.12
SPG7-211ENST00000565370 CNTN2Q02246 1040 aa14.33□□□□□ -0.12
SPG7-211ENST00000565370 ACVR2BQ13705 512 aa14.33□□□□□ -0.12
SPG7-211ENST00000565370 PWP2Q15269 919 aaKnown RBP14.33□□□□□ -0.12
SPG7-211ENST00000565370 USH1GQ495M9 461 aa14.33□□□□□ -0.12
SPG7-211ENST00000565370 GJC2Q5T442 439 aaPredicted RBP14.33□□□□□ -0.12
SPG7-211ENST00000565370 CHRDL2Q6WN34 429 aa14.33□□□□□ -0.12
SPG7-211ENST00000565370 CATIPQ7Z7H3 387 aa14.33□□□□□ -0.12
SPG7-211ENST00000565370 MB21D2Q8IYB1 491 aaPredicted RBP14.33□□□□□ -0.12
SPG7-211ENST00000565370 MTA3Q9BTC8 594 aa14.33□□□□□ -0.12
SPG7-211ENST00000565370 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
SPG7-211ENST00000565370 LCTP09848 1927 aa14.33□□□□□ -0.12
SPG7-211ENST00000565370 B4DLN1 442 aa14.32□□□□□ -0.12
SPG7-211ENST00000565370 NFIBO00712 420 aa14.32□□□□□ -0.12
SPG7-211ENST00000565370 SLC27A2O14975 620 aa14.32□□□□□ -0.12
SPG7-211ENST00000565370 TAL1P17542 331 aaPredicted RBP14.32□□□□□ -0.12
SPG7-211ENST00000565370 MCM5P33992 734 aa14.32□□□□□ -0.12
SPG7-211ENST00000565370 MRPL12P52815 198 aaKnown RBP14.32□□□□□ -0.12
SPG7-211ENST00000565370 TRAF1Q13077 416 aa14.32□□□□□ -0.12
SPG7-211ENST00000565370 LRRC41Q15345 812 aa14.32□□□□□ -0.12
SPG7-211ENST00000565370 RNF207Q6ZRF8 634 aa14.32□□□□□ -0.12
SPG7-211ENST00000565370 STOX1Q6ZVD7 989 aa14.32□□□□□ -0.12
SPG7-211ENST00000565370 SKAP1Q86WV1 359 aa14.32□□□□□ -0.12
SPG7-211ENST00000565370 ADGRF4Q8IZF3 695 aa14.32□□□□□ -0.12
SPG7-211ENST00000565370 FGD4Q96M96 766 aa14.32□□□□□ -0.12
SPG7-211ENST00000565370 SENP6Q9GZR1 1112 aaPredicted RBP14.32□□□□□ -0.12
SPG7-211ENST00000565370 MAF1Q9H063 256 aa14.32□□□□□ -0.12
SPG7-211ENST00000565370 RBM27Q9P2N5 1060 aaKnown RBP14.32□□□□□ -0.12
SPG7-211ENST00000565370 KLRF2D3W0D1 207 aa14.31□□□□□ -0.12
SPG7-211ENST00000565370 SNAI1O95863 264 aaPredicted RBP14.31□□□□□ -0.12
SPG7-211ENST00000565370 BAATQ14032 418 aaPredicted RBP14.31□□□□□ -0.12
SPG7-211ENST00000565370 GRM4Q14833 912 aa14.31□□□□□ -0.12
SPG7-211ENST00000565370 CREB3L3Q68CJ9 461 aa14.31□□□□□ -0.12
SPG7-211ENST00000565370 SLC30A10Q6XR72 485 aa14.31□□□□□ -0.12
SPG7-211ENST00000565370 FBXO11Q86XK2 927 aa14.31□□□□□ -0.12
SPG7-211ENST00000565370 MCF2L2Q86YR7 1114 aa14.31□□□□□ -0.12
SPG7-211ENST00000565370 CTCFLQ8NI51 663 aaPredicted RBP14.31□□□□□ -0.12
SPG7-211ENST00000565370 TMEM87BQ96K49 555 aa14.31□□□□□ -0.12
SPG7-211ENST00000565370 CPVLQ9H3G5 476 aa14.31□□□□□ -0.12
SPG7-211ENST00000565370 VTA1Q9NP79 307 aa14.31□□□□□ -0.12
SPG7-211ENST00000565370 TAF6LQ9Y6J9 622 aa14.31□□□□□ -0.12
SPG7-211ENST00000565370 SYNRGQ9UMZ2 1314 aa14.31□□□□□ -0.12
SPG7-211ENST00000565370 SOWAHBA6NEL2 793 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 CCDC69A6NI79 296 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 PRC1O43663 620 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 DUSP11O75319 330 aaKnown RBP14.3□□□□□ -0.12
SPG7-211ENST00000565370 DDAH1O94760 285 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 PGK1P00558 417 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 CALML3P27482 149 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 KIF5BP33176 963 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 ALDH5A1P51649 535 aaPredicted RBP14.3□□□□□ -0.12
SPG7-211ENST00000565370 LRRC26Q2I0M4 334 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 QRICH1Q2TAL8 776 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 CCDC144BQ3MJ40 725 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 ERICH6BQ5W0A0 696 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 NFXL1Q6ZNB6 911 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 CHST3Q7LGC8 479 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 LENG1Q96BZ8 264 aaPredicted RBP14.3□□□□□ -0.12
SPG7-211ENST00000565370 PRKAG2Q9UGJ0 569 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 MAD2L2Q9UI95 211 aa14.3□□□□□ -0.12
SPG7-211ENST00000565370 MRPL11Q9Y3B7 192 aaKnown RBP14.3□□□□□ -0.12
SPG7-211ENST00000565370 MOXD2PA6NHM9 499 aa14.29□□□□□ -0.12
SPG7-211ENST00000565370 ADAMTS4O75173 837 aa14.29□□□□□ -0.12
SPG7-211ENST00000565370 C6orf222P0C671 652 aaPredicted RBP14.29□□□□□ -0.12
SPG7-211ENST00000565370 ATN1P54259 1190 aaPredicted RBP14.29□□□□□ -0.12
SPG7-211ENST00000565370 ANTXR2P58335 489 aa14.29□□□□□ -0.12
SPG7-211ENST00000565370 RPS6P62753 249 aaKnown RBP14.29□□□□□ -0.12
SPG7-211ENST00000565370 KRT32Q14532 448 aa14.29□□□□□ -0.12
SPG7-211ENST00000565370 NOL8Q76FK4 1167 aaKnown RBP14.29□□□□□ -0.12
SPG7-211ENST00000565370 FBXO16Q8IX29 292 aaPredicted RBP14.29□□□□□ -0.12
SPG7-211ENST00000565370 TMTC2Q8N394 836 aa14.29□□□□□ -0.12
SPG7-211ENST00000565370 DNERQ8NFT8 737 aa14.29□□□□□ -0.12
SPG7-211ENST00000565370 NUP133Q8WUM0 1156 aa14.29□□□□□ -0.12
SPG7-211ENST00000565370 CLEC4DQ8WXI8 215 aa14.29□□□□□ -0.12
SPG7-211ENST00000565370 TSEN34Q9BSV6 310 aaKnown RBP14.29□□□□□ -0.12
SPG7-211ENST00000565370 AMNQ9BXJ7 453 aa14.29□□□□□ -0.12
SPG7-211ENST00000565370 VAT1LQ9HCJ6 419 aa14.29□□□□□ -0.12
SPG7-211ENST00000565370 ZMYND8Q9ULU4 1186 aaPredicted RBP14.29□□□□□ -0.12
SPG7-211ENST00000565370 PHF24Q9UPV7 400 aa14.29□□□□□ -0.12
SPG7-211ENST00000565370 SMCHD1A6NHR9 2005 aa14.29□□□□□ -0.12
SPG7-211ENST00000565370 PALM3A6NDB9 673 aaPredicted RBP14.28□□□□□ -0.12
SPG7-211ENST00000565370 ASTN1O14525 1302 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 ZBTB5O15062 677 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 CALM1P0DP23 149 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 CALM2P0DP24 149 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 CALM3P0DP25 149 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 CST5P28325 142 aaPredicted RBP14.28□□□□□ -0.12
SPG7-211ENST00000565370 ADCYAP1R1P41586 468 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 RTP1P59025 263 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 TNFAIP2Q03169 654 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 PDE4DQ08499 809 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 NECTIN1Q15223 517 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 HOMER1Q86YM7 354 aa14.28□□□□□ -0.12
SPG7-211ENST00000565370 ZNF654Q8IZM8 581 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms