RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 PANX2Q96RD6 677 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 TESK2Q96S53 571 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 CCT7Q99832 543 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 TM6SF1Q9BZW5 370 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 EPB41L1Q9H4G0 881 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 CNOT10Q9H9A5 744 aaKnown RBP6.93□□□□□ -1.3
PTPN9-204ENST00000564970 PARVGQ9HBI0 331 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 HAUS2Q9NVX0 235 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 NLRP2Q9NX02 1062 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 COMMD8Q9NX08 183 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 UBAP1Q9NZ09 502 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.93□□□□□ -1.3
PTPN9-204ENST00000564970 SLC12A4Q9UP95 1085 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 LRCH1Q9Y2L9 728 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 TTC37Q6PGP7 1564 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 CARMIL2Q6F5E8 1435 aa6.93□□□□□ -1.3
PTPN9-204ENST00000564970 RNF17Q9BXT8 1623 aaKnown RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 MAGEA13PA6NCF6 341 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 PABPN1LA6NDY0 278 aaKnown RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 TACC1O75410 805 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 ALDH2P05091 517 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 HNRNPCP07910 306 aaKnown RBP eCLIP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 HSPA8P11142 646 aaKnown RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 PTPN2P17706 415 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 HSPA9P38646 679 aaKnown RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 STAT6P42226 847 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 MATR3P43243 847 aaKnown RBP eCLIP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 ATN1P54259 1190 aaPredicted RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 GEMIN4P57678 1058 aaKnown RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 CTAG1AP78358 180 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 ATP8B2P98198 1209 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 CDK17Q00537 523 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 DNM1Q05193 864 aaKnown RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 KCNA1Q09470 495 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 IKQ13123 557 aaPredicted RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 TRIM29Q14134 588 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 ANKRD1Q15327 319 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 ACCSLQ4AC99 568 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 FKBP15Q5T1M5 1219 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 SYCP2LQ5T4T6 812 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 SPECC1LQ69YQ0 1117 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 HIBCHQ6NVY1 386 aaPredicted RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 TMEM53Q6P2H8 277 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 LRIG3Q6UXM1 1119 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 CCNI2Q6ZMN8 369 aaPredicted RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 ZNF662Q6ZS27 426 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 ANKRD13DQ6ZTN6 518 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 VSTM4Q8IW00 320 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 ARL10Q8N8L6 244 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 CNBD1Q8NA66 436 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 AENQ8WTP8 325 aaKnown RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 CCT6BQ92526 530 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 USP6NLQ92738 828 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 UPF1Q92900 1129 aaKnown RBP eCLIP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 LENG1Q96BZ8 264 aaPredicted RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 EFHD2Q96C19 240 aaPredicted RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 HAUS1Q96CS2 278 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 CLMNQ96JQ2 1002 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 SENP7Q9BQF6 1050 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 CARD9Q9H257 536 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 PLEKHA4Q9H4M7 779 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 ATP8A2Q9NTI2 1148 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 CCDC87Q9NVE4 849 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 GTF3C4Q9UKN8 822 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 SCAF8Q9UPN6 1271 aaKnown RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 SAMM50Q9Y512 469 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.92□□□□□ -1.3
PTPN9-204ENST00000564970 SBNO1A3KN83 1393 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 ABCC5O15440 1437 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 POGZQ7Z3K3 1410 aa6.92□□□□□ -1.3
PTPN9-204ENST00000564970 SMIM31A0A1B0GVY4 71 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 CCT8L1PA6NM43 557 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 E9PMD0 336 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 GOLGA8TH3BQL2 631 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 AGPSO00116 658 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 ASAP2O43150 1006 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 AKR1B10O60218 316 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 ATP5HO75947 161 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 GFPT2O94808 682 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 MAP4K4O95819 1239 aaPredicted RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 POTEJP0CG39 1038 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 GOLGA8HP0CJ92 632 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 SDSP20132 328 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 SP100P23497 879 aaPredicted RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 GSTT1P30711 240 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 PCK1P35558 622 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 ABL2P42684 1182 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 POLE2P56282 527 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 BASP1P80723 227 aaKnown RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 ADAM9Q13443 819 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 CYLC2Q14093 348 aaPredicted RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 ARID5BQ14865 1188 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 PPP1R7Q15435 360 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 FXNQ16595 210 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 TSR1Q2NL82 804 aaKnown RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 MUM1Q2TAK8 710 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 FOXD4L5Q5VV16 416 aaPredicted RBP6.91□□□□□ -1.3
PTPN9-204ENST00000564970 CCDC174Q6PII3 467 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 RUFY4Q6ZNE9 571 aa6.91□□□□□ -1.3
PTPN9-204ENST00000564970 CROCCP2Q86T23 111 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms