RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 FBXO3Q9UK99 471 aa18.15■□□□□ 0.5
LINC00554-201ENST00000564841 KCNJ18B7U540 433 aa18.15■□□□□ 0.5
LINC00554-201ENST00000564841 PDE6AP16499 860 aa18.15■□□□□ 0.5
LINC00554-201ENST00000564841 ADD2P35612 726 aa18.15■□□□□ 0.5
LINC00554-201ENST00000564841 DNA2P51530 1060 aa18.15■□□□□ 0.5
LINC00554-201ENST00000564841 KCNJ12Q14500 433 aa18.15■□□□□ 0.5
LINC00554-201ENST00000564841 PPANQ9NQ55 473 aaKnown RBP18.15■□□□□ 0.5
LINC00554-201ENST00000564841 TRADDQ15628 312 aa18.14■□□□□ 0.49
LINC00554-201ENST00000564841 CREG2Q8IUH2 290 aa18.14■□□□□ 0.49
LINC00554-201ENST00000564841 GJD4Q96KN9 370 aaPredicted RBP18.14■□□□□ 0.49
LINC00554-201ENST00000564841 CCT8L2Q96SF2 557 aa18.14■□□□□ 0.49
LINC00554-201ENST00000564841 A1CFQ9NQ94 594 aaKnown RBP18.14■□□□□ 0.49
LINC00554-201ENST00000564841 RTCBQ9Y3I0 505 aaKnown RBP18.14■□□□□ 0.49
LINC00554-201ENST00000564841 NWD2Q9ULI1 1742 aa18.14■□□□□ 0.49
LINC00554-201ENST00000564841 RASSF9O75901 435 aa18.14■□□□□ 0.49
LINC00554-201ENST00000564841 GDAQ9Y2T3 454 aa18.14■□□□□ 0.49
LINC00554-201ENST00000564841 SRPRBQ9Y5M8 271 aaKnown RBP18.14■□□□□ 0.49
LINC00554-201ENST00000564841 MROH5Q6ZUA9 1318 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 NCK2O43639 380 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 MMP1P03956 469 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 HPDP32754 393 aaPredicted RBP18.13■□□□□ 0.49
LINC00554-201ENST00000564841 GUCY2FP51841 1108 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 SSRP1Q08945 709 aaKnown RBP18.13■□□□□ 0.49
LINC00554-201ENST00000564841 NFRKBQ6P4R8 1299 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 SEPT12Q8IYM1 358 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 FNBP4Q8N3X1 1017 aaPredicted RBP18.13■□□□□ 0.49
LINC00554-201ENST00000564841 OR8K1Q8NGG5 319 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 SGSM3Q96HU1 749 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 VCPKMTQ9H867 229 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 MLXIPQ9HAP2 919 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 HAUS2Q9NVX0 235 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 ZNF233A6NK53 670 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 MINDY4BA8MYZ0 360 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 PRDM1O75626 825 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 CDKL5O76039 1030 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 SKOR1P84550 965 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 CKAP4Q07065 602 aaKnown RBP18.13■□□□□ 0.49
LINC00554-201ENST00000564841 TCP11X2Q5H9J9 407 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 FAM196AQ6ZSG2 479 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 ARHGEF1Q92888 912 aaKnown RBP18.13■□□□□ 0.49
LINC00554-201ENST00000564841 CCDC43Q96MW1 224 aaKnown RBP18.13■□□□□ 0.49
LINC00554-201ENST00000564841 TFCP2L1Q9NZI6 479 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 CAPN6Q9Y6Q1 641 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 ITIH6Q6UXX5 1313 aa18.13■□□□□ 0.49
LINC00554-201ENST00000564841 E7EVH7 732 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 OPA1O60313 960 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 PLEKP08567 350 aaPredicted RBP18.12■□□□□ 0.49
LINC00554-201ENST00000564841 CCDC114Q96M63 670 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 EPB41L4AQ9HCS5 686 aaPredicted RBP18.12■□□□□ 0.49
LINC00554-201ENST00000564841 LUC7L2Q9Y383 392 aaKnown RBP18.12■□□□□ 0.49
LINC00554-201ENST00000564841 SLC12A7Q9Y666 1083 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 HSF2BPO75031 334 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 RFC4P35249 363 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 SPATA4Q8NEY3 305 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 STAG1Q8WVM7 1258 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 IFT81Q8WYA0 676 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 NAPBQ9H115 298 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 TAF1P21675 1872 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 NRAPQ86VF7 1730 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 DNM1LO00429 736 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 ZFYP08048 801 aaPredicted RBP18.12■□□□□ 0.49
LINC00554-201ENST00000564841 KLRK1P26718 216 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 CLNS1AP54105 237 aaKnown RBP18.12■□□□□ 0.49
LINC00554-201ENST00000564841 ANKRD13CQ8N6S4 541 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 MYCBPAPQ8TBZ2 947 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 IGDCC4Q8TDY8 1250 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 EPN3Q9H201 632 aa18.12■□□□□ 0.49
LINC00554-201ENST00000564841 LIMA1Q9UHB6 759 aaKnown RBP18.12■□□□□ 0.49
LINC00554-201ENST00000564841 CYP2D7A0A087X1C5 515 aa18.11■□□□□ 0.49
LINC00554-201ENST00000564841 CDC25CP30307 473 aa18.11■□□□□ 0.49
LINC00554-201ENST00000564841 CARSP49589 748 aaKnown RBP18.11■□□□□ 0.49
LINC00554-201ENST00000564841 SMTNP53814 917 aa18.11■□□□□ 0.49
LINC00554-201ENST00000564841 SAFBQ15424 915 aaKnown RBP eCLIP18.11■□□□□ 0.49
LINC00554-201ENST00000564841 NLRP14Q86W24 1093 aa18.11■□□□□ 0.49
LINC00554-201ENST00000564841 ELOA2Q8IYF1 753 aaPredicted RBP18.11■□□□□ 0.49
LINC00554-201ENST00000564841 NELFBQ8WX92 580 aa18.11■□□□□ 0.49
LINC00554-201ENST00000564841 MS4A14Q96JA4 679 aa18.11■□□□□ 0.49
LINC00554-201ENST00000564841 NFU1Q9UMS0 254 aa18.11■□□□□ 0.49
LINC00554-201ENST00000564841 UTRNP46939 3433 aa18.11■□□□□ 0.49
LINC00554-201ENST00000564841 NKRFO15226 690 aaKnown RBP eCLIP18.11■□□□□ 0.49
LINC00554-201ENST00000564841 PMS1P54277 932 aaKnown RBP18.11■□□□□ 0.49
LINC00554-201ENST00000564841 SDR42E1Q8WUS8 393 aa18.11■□□□□ 0.49
LINC00554-201ENST00000564841 SHISA4Q96DD7 197 aa18.11■□□□□ 0.49
LINC00554-201ENST00000564841 LY9Q9HBG7 655 aa18.11■□□□□ 0.49
LINC00554-201ENST00000564841 LRWD1Q9UFC0 647 aa18.11■□□□□ 0.49
LINC00554-201ENST00000564841 GCFC2P16383 781 aaKnown RBP18.1■□□□□ 0.49
LINC00554-201ENST00000564841 PTGISQ16647 500 aa18.1■□□□□ 0.49
LINC00554-201ENST00000564841 IRF2BP1Q8IU81 584 aa18.1■□□□□ 0.49
LINC00554-201ENST00000564841 RNF217Q8TC41 542 aa18.1■□□□□ 0.49
LINC00554-201ENST00000564841 MTRQ99707 1265 aa18.1■□□□□ 0.49
LINC00554-201ENST00000564841 TPX2Q9ULW0 747 aaKnown RBP18.1■□□□□ 0.49
LINC00554-201ENST00000564841 SRCAPQ6ZRS2 3230 aa18.1■□□□□ 0.49
LINC00554-201ENST00000564841 ZNF263O14978 683 aa18.1■□□□□ 0.49
LINC00554-201ENST00000564841 KRT86O43790 486 aa18.1■□□□□ 0.49
LINC00554-201ENST00000564841 MOCS3O95396 460 aa18.1■□□□□ 0.49
LINC00554-201ENST00000564841 FGFR2P21802 821 aa18.1■□□□□ 0.49
LINC00554-201ENST00000564841 CCNHP51946 323 aaPredicted RBP18.1■□□□□ 0.49
LINC00554-201ENST00000564841 EVX2Q03828 476 aa18.1■□□□□ 0.49
LINC00554-201ENST00000564841 ACCSLQ4AC99 568 aa18.1■□□□□ 0.49
LINC00554-201ENST00000564841 CHADLQ6NUI6 762 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms