RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	ARHGAP4	P98171	946 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	TTC39A	Q5SRH9	613 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	SLC17A8	Q8NDX2	589 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	EFHD1	Q9BUP0	239 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	GYG2	O15488	501 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	ZFYVE27	Q5T4F4	411 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	UBE3B	Q7Z3V4	1068 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	SLF2	Q8IX21	1173 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	BAG2	O95816	211 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	KCTD16	Q68DU8	428 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	FUK	Q8N0W3	1084 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	ATP10B	O94823	1461 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	RASGRF2	O14827	1237 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	GJA8	P48165	433 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	TRPM8	Q7Z2W7	1104 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	PPP2R3C	Q969Q6	453 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	CCDC188	H7C350	402 aa		4.65	□□□□□ -1.66
MACF1-231	ENST00000564288	CD302	Q8IX05	232 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	AIDA	Q96BJ3	306 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	USP15	Q9Y4E8	981 aa	Predicted RBP	4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	MARK3	P27448	753 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	EMC10	Q5UCC4	262 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	SYTL4	Q96C24	671 aa	Predicted RBP	4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	PAGR1	Q9BTK6	254 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	FOXP3	Q9BZS1	431 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	BLVRA	P53004	296 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	PAPD7	Q5XG87	772 aa	Known RBP	4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	ANKRD2	Q9GZV1	360 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	CNOT7	Q9UIV1	285 aa	Known RBP	4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	TNFAIP3	P21580	790 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	TRIM65	Q6PJ69	517 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	STKLD1	Q8NE28	680 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	DSCC1	Q9BVC3	393 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	hCG_1984214	I3L0E3	225 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	PEX26	Q7Z412	305 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	ZNF473	Q8WTR7	871 aa	Known RBP	4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	SELENOS	Q9BQE4	189 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	ZNF446	Q9NWS9	450 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	GOLGA8Q	A0A0J9YX86	632 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	GOLGA8O	A6NCC3	632 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	GOLGA8N	F8WBI6	632 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	DHX40	Q8IX18	779 aa	Known RBP	4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	TRIML2	Q8N7C3	387 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	PARP3	Q9Y6F1	533 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	OCA2	Q04671	838 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	SULT6B1	Q6IMI4	303 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	SCYL3	Q8IZE3	742 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	KLHDC4	Q8TBB5	520 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	CCDC138	Q96M89	665 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	FUCA2	Q9BTY2	467 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	GOLGA8B	A8MQT2	603 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	ADCY3	O60266	1144 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	NUF2	Q9BZD4	464 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	INTU	Q9ULD6	942 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	ATP7A	Q04656	1500 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	TTC5	Q8N0Z6	440 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	JARID2	Q92833	1246 aa	Predicted RBP	4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	NR1H4	Q96RI1	486 aa	Predicted RBP	4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	PARVB	Q9HBI1	364 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	DKK3	Q9UBP4	350 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	SEC63	Q9UGP8	760 aa	Known RBP	4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	ZCWPW2	Q504Y3	356 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	CC2D2B	Q6DHV5	1058 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	CATSPER1	Q8NEC5	780 aa		4.65	□□□□□ -1.67
MACF1-231	ENST00000564288	POTEF	A5A3E0	1075 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	FAM187A	A6NFU0	413 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	LAD1	O00515	517 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	MCF2L	O15068	1137 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	POTEI	P0CG38	1075 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	SFMBT2	Q5VUG0	894 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	POTEE	Q6S8J3	1075 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288		A0A1W2PQC6	194 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	ARMCX5	Q6P1M9	558 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	SV2B	Q7L1I2	683 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	HS2ST1	Q7LGA3	356 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	PASD1	Q8IV76	773 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	REXO1L1P	Q8IX06	675 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	RAPGEF4	Q8WZA2	1011 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	NOC4L	Q9BVI4	516 aa	Known RBP	4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	BTBD7	Q9P203	1132 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	ABCC4	O15439	1325 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	PBRM1	Q86U86	1689 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	CDK17	Q00537	523 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	NSL1	Q96IY1	281 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	HPCAL4	Q9UM19	191 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	SLC4A7	Q9Y6M7	1214 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	MACROD2	A1Z1Q3	448 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	NECTIN1	Q15223	517 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	SERPINI1	Q99574	410 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	TRIM55	Q9BYV6	548 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	FLT4	P35916	1363 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	SPDYC	Q5MJ68	293 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	USP33	Q8TEY7	942 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	MTO1	Q9Y2Z2	717 aa	Known RBP	4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	ORC4	O43929	436 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	TMEM67	Q5HYA8	995 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	GALNT15	Q8N3T1	639 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	CDK19	Q9BWU1	502 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	CAPN11	Q9UMQ6	739 aa		4.64	□□□□□ -1.67
MACF1-231	ENST00000564288	ARHGEF9	O43307	516 aa		4.64	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms