RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 TMOD4Q9NZQ9 345 aa22.19■■□□□ 1.14
SPSB3-204ENST00000563741 PCDHA4Q9UN74 947 aa22.19■■□□□ 1.14
SPSB3-204ENST00000563741 KRT85P78386 507 aa22.18■■□□□ 1.14
SPSB3-204ENST00000563741 GALNT17Q6IS24 598 aa22.18■■□□□ 1.14
SPSB3-204ENST00000563741 GDPD2Q9HCC8 539 aa22.18■■□□□ 1.14
SPSB3-204ENST00000563741 DDX11L8A8MPP1 907 aa22.17■■□□□ 1.14
SPSB3-204ENST00000563741 PDHXO00330 501 aa22.17■■□□□ 1.14
SPSB3-204ENST00000563741 FIBPO43427 364 aa22.17■■□□□ 1.14
SPSB3-204ENST00000563741 FLOT1O75955 427 aa22.17■■□□□ 1.14
SPSB3-204ENST00000563741 GADL1Q6ZQY3 521 aa22.17■■□□□ 1.14
SPSB3-204ENST00000563741 BLIDQ8IZY5 108 aa22.17■■□□□ 1.14
SPSB3-204ENST00000563741 AMNQ9BXJ7 453 aa22.17■■□□□ 1.14
SPSB3-204ENST00000563741 FTOQ9C0B1 505 aaKnown RBP eCLIP22.17■■□□□ 1.14
SPSB3-204ENST00000563741 SMCO2A6NFE2 343 aa22.17■■□□□ 1.14
SPSB3-204ENST00000563741 GOLGA6L22H0YM25 854 aa22.17■■□□□ 1.14
SPSB3-204ENST00000563741 M0R2N6 131 aa22.17■■□□□ 1.14
SPSB3-204ENST00000563741 GPAT2Q6NUI2 795 aa22.17■■□□□ 1.14
SPSB3-204ENST00000563741 SAMD1Q6SPF0 538 aaPredicted RBP22.17■■□□□ 1.14
SPSB3-204ENST00000563741 CTU1Q7Z7A3 348 aaKnown RBP22.17■■□□□ 1.14
SPSB3-204ENST00000563741 PRPF38AQ8NAV1 312 aaKnown RBP22.17■■□□□ 1.14
SPSB3-204ENST00000563741 PPP1R9AQ9ULJ8 1098 aa22.17■■□□□ 1.14
SPSB3-204ENST00000563741 PCDHA1Q9Y5I3 950 aa22.17■■□□□ 1.14
SPSB3-204ENST00000563741 MYH15Q9Y2K3 1946 aa22.16■■□□□ 1.14
SPSB3-204ENST00000563741 EARS2Q5JPH6 523 aaKnown RBP22.16■■□□□ 1.14
SPSB3-204ENST00000563741 FBXO11Q86XK2 927 aa22.16■■□□□ 1.14
SPSB3-204ENST00000563741 USP28Q96RU2 1077 aa22.16■■□□□ 1.14
SPSB3-204ENST00000563741 C6orf50Q9HD87 102 aa22.16■■□□□ 1.14
SPSB3-204ENST00000563741 TFIP11Q9UBB9 837 aaKnown RBP22.16■■□□□ 1.14
SPSB3-204ENST00000563741 FAM205CA6NFA0 338 aa22.15■■□□□ 1.14
SPSB3-204ENST00000563741 TLR2O60603 784 aa22.15■■□□□ 1.14
SPSB3-204ENST00000563741 GNA11P29992 359 aa22.15■■□□□ 1.14
SPSB3-204ENST00000563741 ATL3Q6DD88 541 aa22.15■■□□□ 1.14
SPSB3-204ENST00000563741 TMEM87AQ8NBN3 555 aa22.15■■□□□ 1.14
SPSB3-204ENST00000563741 ZNF396Q96N95 335 aaPredicted RBP22.15■■□□□ 1.14
SPSB3-204ENST00000563741 SLC45A1Q9Y2W3 748 aa22.15■■□□□ 1.14
SPSB3-204ENST00000563741 LOC285556D6RIA3 1793 aa22.15■■□□□ 1.14
SPSB3-204ENST00000563741 TAL1P17542 331 aaPredicted RBP22.14■■□□□ 1.14
SPSB3-204ENST00000563741 ADCY7P51828 1080 aa22.14■■□□□ 1.14
SPSB3-204ENST00000563741 USH1GQ495M9 461 aa22.14■■□□□ 1.14
SPSB3-204ENST00000563741 CCDC174Q6PII3 467 aa22.14■■□□□ 1.14
SPSB3-204ENST00000563741 PROCA1Q8NCQ7 364 aaPredicted RBP22.14■■□□□ 1.14
SPSB3-204ENST00000563741 RASGRP4Q8TDF6 673 aa22.14■■□□□ 1.14
SPSB3-204ENST00000563741 MCOLN1Q9GZU1 580 aa22.14■■□□□ 1.14
SPSB3-204ENST00000563741 TCHHQ07283 1943 aa22.14■■□□□ 1.14
SPSB3-204ENST00000563741 SP3Q02447 781 aa22.14■■□□□ 1.13
SPSB3-204ENST00000563741 TREML2Q5T2D2 321 aa22.14■■□□□ 1.13
SPSB3-204ENST00000563741 ERO1AQ96HE7 468 aa22.14■■□□□ 1.13
SPSB3-204ENST00000563741 CFAP45Q9UL16 551 aa22.14■■□□□ 1.13
SPSB3-204ENST00000563741 AGTPBP1Q9UPW5 1226 aa22.14■■□□□ 1.13
SPSB3-204ENST00000563741 PARP14Q460N5 1801 aa22.13■■□□□ 1.13
SPSB3-204ENST00000563741 CATSPERGQ6ZRH7 1159 aa22.13■■□□□ 1.13
SPSB3-204ENST00000563741 PARK7Q99497 189 aaKnown RBP22.13■■□□□ 1.13
SPSB3-204ENST00000563741 SCAND2PQ9GZW5 306 aaPredicted RBP22.13■■□□□ 1.13
SPSB3-204ENST00000563741 SLC38A10Q9HBR0 1119 aa22.13■■□□□ 1.13
SPSB3-204ENST00000563741 RIC8AQ9NPQ8 531 aa22.13■■□□□ 1.13
SPSB3-204ENST00000563741 LMBRD1Q9NUN5 540 aa22.13■■□□□ 1.13
SPSB3-204ENST00000563741 PCDHA6Q9UN73 950 aa22.13■■□□□ 1.13
SPSB3-204ENST00000563741 PCDHA8Q9Y5H6 950 aa22.13■■□□□ 1.13
SPSB3-204ENST00000563741 ZNF536O15090 1300 aa22.13■■□□□ 1.13
SPSB3-204ENST00000563741 RLFQ13129 1914 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 USP17L15C9J2P7 530 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 USP17L13C9JLJ4 530 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 USP17L11C9JVI0 530 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 USP17L18D6R9N7 530 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 USP17L22D6RA61 530 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 USP17L17D6RBQ6 530 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 USP17L19D6RCP7 530 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 USP17L20D6RJB6 530 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 TOB1P50616 345 aaPredicted RBP22.12■■□□□ 1.13
SPSB3-204ENST00000563741 CEBPZQ03701 1054 aaKnown RBP22.12■■□□□ 1.13
SPSB3-204ENST00000563741 USP17L24Q0WX57 530 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 RILPL1Q5EBL4 403 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 PIK3AP1Q6ZUJ8 805 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 REXO1Q8N1G1 1221 aaKnown RBP22.12■■□□□ 1.13
SPSB3-204ENST00000563741 BICD2Q8TD16 824 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 LEO1Q8WVC0 666 aaPredicted RBP22.12■■□□□ 1.13
SPSB3-204ENST00000563741 ATG4CQ96DT6 458 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 POLR3EQ9NVU0 708 aa22.12■■□□□ 1.13
SPSB3-204ENST00000563741 PRPF40AO75400 957 aaKnown RBP22.11■■□□□ 1.13
SPSB3-204ENST00000563741 CUL5Q93034 780 aa22.11■■□□□ 1.13
SPSB3-204ENST00000563741 PSTPIP2Q9H939 334 aa22.11■■□□□ 1.13
SPSB3-204ENST00000563741 RTEL1Q9NZ71 1219 aa22.11■■□□□ 1.13
SPSB3-204ENST00000563741 CLIC4Q9Y696 253 aa22.11■■□□□ 1.13
SPSB3-204ENST00000563741 VWA5AO00534 786 aa22.11■■□□□ 1.13
SPSB3-204ENST00000563741 OPLAHO14841 1288 aa22.11■■□□□ 1.13
SPSB3-204ENST00000563741 ICAM1P05362 532 aa22.11■■□□□ 1.13
SPSB3-204ENST00000563741 NASPP49321 788 aaPredicted RBP22.11■■□□□ 1.13
SPSB3-204ENST00000563741 TRAF1Q13077 416 aa22.11■■□□□ 1.13
SPSB3-204ENST00000563741 NBR1Q14596 966 aa22.11■■□□□ 1.13
SPSB3-204ENST00000563741 PKN2Q16513 984 aaKnown RBP22.11■■□□□ 1.13
SPSB3-204ENST00000563741 SPATA32Q96LK8 384 aa22.11■■□□□ 1.13
SPSB3-204ENST00000563741 ELP1O95163 1332 aa22.11■■□□□ 1.13
SPSB3-204ENST00000563741 DSG3P32926 999 aa22.1■■□□□ 1.13
SPSB3-204ENST00000563741 PABPC4Q13310 644 aaKnown RBP eCLIP22.1■■□□□ 1.135e-6■□□□□ 10.8
SPSB3-204ENST00000563741 COG2Q14746 738 aa22.1■■□□□ 1.13
SPSB3-204ENST00000563741 ANO1Q5XXA6 986 aa22.1■■□□□ 1.13
SPSB3-204ENST00000563741 C17orf99Q6UX52 265 aa22.1■■□□□ 1.13
SPSB3-204ENST00000563741 CD99L2Q8TCZ2 262 aa22.1■■□□□ 1.13
SPSB3-204ENST00000563741 ABHD8Q96I13 439 aa22.1■■□□□ 1.13
SPSB3-204ENST00000563741 ADAMTS5Q9UNA0 930 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms