RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 PFKFB2O60825 505 aa18.94■□□□□ 0.62
USB1-206ENST00000562534 XRCC5P13010 732 aaKnown RBP18.94■□□□□ 0.62
USB1-206ENST00000562534 RGS2P41220 211 aa18.94■□□□□ 0.62
USB1-206ENST00000562534 MAP2K5Q13163 448 aa18.94■□□□□ 0.62
USB1-206ENST00000562534 STK3Q13188 491 aa18.94■□□□□ 0.62
USB1-206ENST00000562534 FBXO46Q6PJ61 603 aaPredicted RBP18.94■□□□□ 0.62
USB1-206ENST00000562534 DPP9Q86TI2 863 aa18.94■□□□□ 0.62
USB1-206ENST00000562534 ANKRD35Q8N283 1001 aa18.94■□□□□ 0.62
USB1-206ENST00000562534 RGS22Q8NE09 1264 aa18.94■□□□□ 0.62
USB1-206ENST00000562534 RAET1EQ8TD07 263 aa18.94■□□□□ 0.62
USB1-206ENST00000562534 USP6NLQ92738 828 aa18.94■□□□□ 0.62
USB1-206ENST00000562534 ZSCAN31Q96LW9 406 aaPredicted RBP18.94■□□□□ 0.62
USB1-206ENST00000562534 RBM27Q9P2N5 1060 aaKnown RBP18.94■□□□□ 0.62
USB1-206ENST00000562534 GABRQQ9UN88 632 aa18.94■□□□□ 0.62
USB1-206ENST00000562534 V9GY48 417 aaPredicted RBP18.94■□□□□ 0.62
USB1-206ENST00000562534 IFNAR1P17181 557 aa18.93■□□□□ 0.62
USB1-206ENST00000562534 ADORA2AP29274 412 aa18.93■□□□□ 0.62
USB1-206ENST00000562534 AKAP17AQ02040 695 aaKnown RBP18.93■□□□□ 0.62
USB1-206ENST00000562534 PRKCZQ05513 592 aa18.93■□□□□ 0.62
USB1-206ENST00000562534 FUT2Q10981 343 aa18.93■□□□□ 0.62
USB1-206ENST00000562534 USH1GQ495M9 461 aa18.93■□□□□ 0.62
USB1-206ENST00000562534 MCF2L2Q86YR7 1114 aa18.93■□□□□ 0.62
USB1-206ENST00000562534 TRMT44Q8IYL2 757 aaKnown RBP18.93■□□□□ 0.62
USB1-206ENST00000562534 PIBF1Q8WXW3 757 aa18.93■□□□□ 0.62
USB1-206ENST00000562534 COL11A1P12107 1806 aaPredicted RBP18.93■□□□□ 0.62
USB1-206ENST00000562534 PRPF3O43395 683 aaKnown RBP18.92■□□□□ 0.62
USB1-206ENST00000562534 HOXC6P09630 235 aa18.92■□□□□ 0.62
USB1-206ENST00000562534 MCM2P49736 904 aa18.92■□□□□ 0.62
USB1-206ENST00000562534 NTRK3Q16288 839 aa18.92■□□□□ 0.62
USB1-206ENST00000562534 ME3Q16798 604 aa18.92■□□□□ 0.62
USB1-206ENST00000562534 MUM1L1Q5H9M0 696 aa18.92■□□□□ 0.62
USB1-206ENST00000562534 SAMD3Q8N6K7 520 aa18.92■□□□□ 0.62
USB1-206ENST00000562534 PXYLP1Q8TE99 480 aa18.92■□□□□ 0.62
USB1-206ENST00000562534 NCOA5Q9HCD5 579 aaKnown RBP18.92■□□□□ 0.62
USB1-206ENST00000562534 DIS3Q9Y2L1 958 aaKnown RBP18.92■□□□□ 0.62
USB1-206ENST00000562534 CDKL5O76039 1030 aa18.91■□□□□ 0.62
USB1-206ENST00000562534 CYP2B6P20813 491 aa18.91■□□□□ 0.62
USB1-206ENST00000562534 SCRN1Q12765 414 aa18.91■□□□□ 0.62
USB1-206ENST00000562534 NOL8Q76FK4 1167 aaKnown RBP18.91■□□□□ 0.62
USB1-206ENST00000562534 CLEC4DQ8WXI8 215 aa18.91■□□□□ 0.62
USB1-206ENST00000562534 RNF26Q9BY78 433 aaPredicted RBP18.91■□□□□ 0.62
USB1-206ENST00000562534 MAP3K20Q9NYL2 800 aaKnown RBP18.91■□□□□ 0.62
USB1-206ENST00000562534 PFASO15067 1338 aa18.91■□□□□ 0.62
USB1-206ENST00000562534 ADCY3O60266 1144 aa18.9■□□□□ 0.62
USB1-206ENST00000562534 PPP1R11O60927 126 aaPredicted RBP18.9■□□□□ 0.62
USB1-206ENST00000562534 SSRP1Q08945 709 aaKnown RBP18.9■□□□□ 0.62
USB1-206ENST00000562534 COL13A1Q5TAT6 717 aaPredicted RBP18.9■□□□□ 0.62
USB1-206ENST00000562534 TRIM22Q8IYM9 498 aa18.9■□□□□ 0.62
USB1-206ENST00000562534 A1CFQ9NQ94 594 aaKnown RBP18.9■□□□□ 0.62
USB1-206ENST00000562534 SH2B1Q9NRF2 756 aaPredicted RBP18.9■□□□□ 0.62
USB1-206ENST00000562534 PTCH2Q9Y6C5 1203 aa18.9■□□□□ 0.62
USB1-206ENST00000562534 MGAMO43451 1857 aa18.9■□□□□ 0.62
USB1-206ENST00000562534 DNAJC25-GNG10A0A024R161 153 aa18.89■□□□□ 0.61
USB1-206ENST00000562534 hCG_1984214I3L0E3 225 aa18.89■□□□□ 0.61
USB1-206ENST00000562534 COBLO75128 1261 aa18.89■□□□□ 0.61
USB1-206ENST00000562534 NSMFQ6X4W1 530 aa18.89■□□□□ 0.61
USB1-206ENST00000562534 RNF207Q6ZRF8 634 aa18.89■□□□□ 0.61
USB1-206ENST00000562534 ZNF713Q8N859 430 aaPredicted RBP18.89■□□□□ 0.61
USB1-206ENST00000562534 SLAIN1Q8ND83 568 aa18.89■□□□□ 0.61
USB1-206ENST00000562534 APBA2Q99767 749 aa18.89■□□□□ 0.61
USB1-206ENST00000562534 MCOLN1Q9GZU1 580 aa18.89■□□□□ 0.61
USB1-206ENST00000562534 CYP39A1Q9NYL5 469 aa18.89■□□□□ 0.61
USB1-206ENST00000562534 CNTNAP5Q8WYK1 1306 aa18.89■□□□□ 0.61
USB1-206ENST00000562534 hCG_1642624A0A1W2PR95 340 aa18.88■□□□□ 0.61
USB1-206ENST00000562534 PTPDC1A2A3K4 754 aa18.88■□□□□ 0.61
USB1-206ENST00000562534 POTEB2H3BUK9 544 aa18.88■□□□□ 0.61
USB1-206ENST00000562534 NFIBO00712 420 aa18.88■□□□□ 0.61
USB1-206ENST00000562534 PGK2P07205 417 aa18.88■□□□□ 0.61
USB1-206ENST00000562534 GRK4P32298 578 aa18.88■□□□□ 0.61
USB1-206ENST00000562534 BAATQ14032 418 aaPredicted RBP18.88■□□□□ 0.61
USB1-206ENST00000562534 PFKFB3Q16875 520 aaPredicted RBP18.88■□□□□ 0.61
USB1-206ENST00000562534 ZNF792Q3KQV3 632 aa18.88■□□□□ 0.61
USB1-206ENST00000562534 PHKBQ93100 1093 aa18.88■□□□□ 0.61
USB1-206ENST00000562534 GTF3C6Q969F1 213 aa18.88■□□□□ 0.61
USB1-206ENST00000562534 SLC26A6Q9BXS9 759 aa18.88■□□□□ 0.61
USB1-206ENST00000562534 BAZ2BQ9UIF8 2168 aaKnown RBP18.88■□□□□ 0.61
USB1-206ENST00000562534 SCG2P13521 617 aa18.87■□□□□ 0.61
USB1-206ENST00000562534 HEATR3Q7Z4Q2 680 aa18.87■□□□□ 0.61
USB1-206ENST00000562534 ZNF467Q7Z7K2 595 aaPredicted RBP18.87■□□□□ 0.61
USB1-206ENST00000562534 TEX2Q8IWB9 1127 aa18.87■□□□□ 0.61
USB1-206ENST00000562534 DOCK3Q8IZD9 2030 aa18.87■□□□□ 0.61
USB1-206ENST00000562534 MSL3Q8N5Y2 521 aaKnown RBP18.87■□□□□ 0.61
USB1-206ENST00000562534 NECAB1Q8N987 351 aa18.87■□□□□ 0.61
USB1-206ENST00000562534 NPLOC4Q8TAT6 608 aa18.87■□□□□ 0.61
USB1-206ENST00000562534 DEXIO95424 95 aa18.86■□□□□ 0.61
USB1-206ENST00000562534 CFBP00751 764 aa18.86■□□□□ 0.61
USB1-206ENST00000562534 TAL1P17542 331 aaPredicted RBP18.86■□□□□ 0.61
USB1-206ENST00000562534 RPS6P62753 249 aaKnown RBP18.86■□□□□ 0.61
USB1-206ENST00000562534 SLC9C1Q4G0N8 1177 aa18.86■□□□□ 0.61
USB1-206ENST00000562534 OLFML2BQ68BL8 750 aa18.86■□□□□ 0.61
USB1-206ENST00000562534 FAM133AQ8N9E0 248 aa18.86■□□□□ 0.61
USB1-206ENST00000562534 MAML3Q96JK9 1138 aa18.86■□□□□ 0.61
USB1-206ENST00000562534 BARHL2Q9NY43 387 aa18.86■□□□□ 0.61
USB1-206ENST00000562534 BIN2Q9UBW5 565 aaPredicted RBP18.86■□□□□ 0.61
USB1-206ENST00000562534 ADD3Q9UEY8 706 aaKnown RBP18.86■□□□□ 0.61
USB1-206ENST00000562534 B4DLN1 442 aa18.85■□□□□ 0.61
USB1-206ENST00000562534 GCOM1H8Y6P7 765 aaPredicted RBP18.85■□□□□ 0.61
USB1-206ENST00000562534 LARGE1O95461 756 aa18.85■□□□□ 0.61
USB1-206ENST00000562534 POLR2MP0CAP2 368 aa18.85■□□□□ 0.61
USB1-206ENST00000562534 CALML3P27482 149 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms