RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 COL6A3P12111 3177 aa9.73□□□□□ -0.85
GINS3-204ENST00000561952 MYH6P13533 1939 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 DNAJC25-GNG10A0A024R161 153 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 A0A1W2PPC1 479 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 A0A1W2PQ45 241 aaPredicted RBP9.72□□□□□ -0.85
GINS3-204ENST00000561952 A0A1W2PQY0 241 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 MYADML2A6NDP7 307 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 ADCY6O43306 1168 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 PQBP1O60828 265 aaKnown RBP9.72□□□□□ -0.85
GINS3-204ENST00000561952 C6orf222P0C671 652 aaPredicted RBP9.72□□□□□ -0.85
GINS3-204ENST00000561952 PTGS1P23219 599 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 BMP8BP34820 402 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 OAZ1P54368 228 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 MFAP1P55081 439 aaKnown RBP9.72□□□□□ -0.85
GINS3-204ENST00000561952 AAMPQ13685 434 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 AKNAD1Q5T1N1 836 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 RCSD1Q6JBY9 416 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 NOL8Q76FK4 1167 aaKnown RBP9.72□□□□□ -0.85
GINS3-204ENST00000561952 CCDC144CPQ8IYA2 1237 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 DCAF4Q8WV16 495 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 PURBQ96QR8 312 aaKnown RBP9.72□□□□□ -0.85
GINS3-204ENST00000561952 TMEM47Q9BQJ4 181 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 OCEL1Q9H607 264 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 A1CFQ9NQ94 594 aaKnown RBP9.72□□□□□ -0.85
GINS3-204ENST00000561952 NRBP1Q9UHY1 535 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 FAM184BQ9ULE4 1060 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 SYNGAP1Q96PV0 1343 aa9.72□□□□□ -0.85
GINS3-204ENST00000561952 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.71□□□□□ -0.86
GINS3-204ENST00000561952 ZNF213O14771 459 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 GOLGA8HP0CJ92 632 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 TOP1P11387 765 aaKnown RBP9.71□□□□□ -0.86
GINS3-204ENST00000561952 PDE4AP27815 886 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 ACVR2BQ13705 512 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 CCDC144BQ3MJ40 725 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 SYDE2Q5VT97 1194 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 Q7L0L9 218 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 EEPD1Q7L9B9 569 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 SH3RF1Q7Z6J0 888 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 VTI1AQ96AJ9 217 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 CPVLQ9H3G5 476 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 PDLIM7Q9NR12 457 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 PHF24Q9UPV7 400 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 ZMYM6O95789 1325 aa9.71□□□□□ -0.86
GINS3-204ENST00000561952 PTPDC1A2A3K4 754 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 SOWAHBA6NEL2 793 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 B4E1Z4 1266 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 KDM4AO75164 1064 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 ADAMTS4O75173 837 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 FGRP09769 529 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 FDX1P10109 184 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 PDHBP11177 359 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 BEX3Q00994 111 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 TLE2Q04725 743 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 MAMDC4Q6UXC1 1216 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 FBXO16Q8IX29 292 aaPredicted RBP9.7□□□□□ -0.86
GINS3-204ENST00000561952 MSL3Q8N5Y2 521 aaKnown RBP9.7□□□□□ -0.86
GINS3-204ENST00000561952 ESR2Q92731 530 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 BADQ92934 168 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 IL25Q9H293 177 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 RANBP17Q9H2T7 1088 aaKnown RBP9.7□□□□□ -0.86
GINS3-204ENST00000561952 ABHD16BQ9H3Z7 469 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 OSBPL3Q9H4L5 887 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 RNF41Q9H4P4 317 aaPredicted RBP9.7□□□□□ -0.86
GINS3-204ENST00000561952 STARD7Q9NQZ5 370 aa9.7□□□□□ -0.86
GINS3-204ENST00000561952 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.7□□□□□ -0.86
GINS3-204ENST00000561952 TRIM43BA6NCK2 446 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 HIP1O00291 1037 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 NFIBO00712 420 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 ASTN1O14525 1302 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 PLA2G6O60733 806 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 ICAM1P05362 532 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 CLTBP09497 229 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 GSPT1P15170 499 aaKnown RBP9.69□□□□□ -0.86
GINS3-204ENST00000561952 CALML3P27482 149 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 ACLYP53396 1101 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 SNX17Q15036 470 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 KCNA10Q16322 511 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 TKFCQ3LXA3 575 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 USH1GQ495M9 461 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 ZNF467Q7Z7K2 595 aaPredicted RBP9.69□□□□□ -0.86
GINS3-204ENST00000561952 DEFB123Q8N688 67 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 FAM133AQ8N9E0 248 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 TRIM43Q96BQ3 446 aaPredicted RBP9.69□□□□□ -0.86
GINS3-204ENST00000561952 FAM161BQ96MY7 647 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 CDH23Q9H251 3354 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 SPC25Q9HBM1 224 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 TCP11L1Q9NUJ3 509 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 CYP39A1Q9NYL5 469 aa9.69□□□□□ -0.86
GINS3-204ENST00000561952 EYSQ5T1H1 3165 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 DHX16O60231 1041 aaKnown RBP9.68□□□□□ -0.86
GINS3-204ENST00000561952 DUSP11O75319 330 aaKnown RBP9.68□□□□□ -0.86
GINS3-204ENST00000561952 ASGR1P07306 291 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 RAG1P15918 1043 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 ITGB8P26012 769 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 NOVP48745 357 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 TNFAIP2Q03169 654 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 ZNF543Q08ER8 600 aa9.68□□□□□ -0.86
GINS3-204ENST00000561952 BAATQ14032 418 aaPredicted RBP9.68□□□□□ -0.86
GINS3-204ENST00000561952 IMMTQ16891 758 aaKnown RBP9.68□□□□□ -0.86
GINS3-204ENST00000561952 GNASQ5JWF2 1037 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms