RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 A1BGP04217 495 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 ATF2P15336 505 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 TFAP4Q01664 338 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 TOGARAM2Q6ZUX3 1019 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 ZNF589Q86UQ0 364 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 SCYL3Q8IZE3 742 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 REXO1Q8N1G1 1221 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 ZBED2Q9BTP6 218 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 FGAP02671 866 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 PPP2R5BQ15173 497 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 MMS22LQ6ZRQ5 1243 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 TADA2BQ86TJ2 420 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 PANK4Q9NVE7 773 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 EXOC7Q9UPT5 735 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 ATF7P17544 494 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 NR1D1P20393 614 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 FANCBQ8NB91 859 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 ANKRD2Q9GZV1 360 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 NOVA2Q9UNW9 492 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 TRPM2O94759 1503 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 HIBADHP31937 336 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 NEURL1BA8MQ27 555 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 CD19P15391 556 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 TPH2Q8IWU9 490 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 GDAP1Q8TB36 358 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 MORC4Q8TE76 937 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 GRK7Q8WTQ7 553 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 IP6K1Q92551 441 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 H2AFZP0C0S5 128 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 PLTPP55058 493 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 EIF4A1P60842 406 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 KAZNQ674X7 775 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 H2AFVQ71UI9 128 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 AFAP1L2Q8N4X5 818 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 PPP4R1Q8TF05 950 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 RIC8AQ9NPQ8 531 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 KCNQ3O43525 872 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 STK10O94804 968 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 PHBP35232 272 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 STRN3Q13033 797 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 PDCLQ13371 301 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 ZSCAN10Q96SZ4 725 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 HOXB7P09629 217 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 CC2D1AQ6P1N0 951 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 TBC1D1Q86TI0 1168 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 GSPT2Q8IYD1 628 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 CNBD1Q8NA66 436 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 LPIN2Q92539 896 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 ST7Q9NRC1 585 aa11.17□□□□□ -0.62
GTF3C1-202ENST00000561623 KIAA0232Q92628 1395 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 NUP153P49790 1475 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 WDR7Q9Y4E6 1490 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 IRX4P78413 519 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 DHX9Q08211 1270 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 LLGL1Q15334 1064 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 MAPKAPK5Q8IW41 473 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 RNF34Q969K3 372 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 C19orf44Q9H6X5 657 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 ARMCX3Q9UH62 379 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 IL2RBP14784 551 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 ZYXQ15942 572 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 IFNL3Q8IZI9 196 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 HAUS7Q99871 368 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 BABAM1Q9NWV8 329 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 RAB20Q9NX57 234 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 INTUQ9ULD6 942 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 SPECC1L-ADORA2AF8WAN1 911 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 PPP6R2O75170 966 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 GCP02774 474 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 IL9RQ01113 521 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 MAP3K21Q5TCX8 1036 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 MIER3Q7Z3K6 550 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 FNBP4Q8N3X1 1017 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 SDR42E1Q8WUS8 393 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 PDE8AO60658 829 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 LINC00301Q8NCQ3 95 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 Q9H521 79 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 POLR3EQ9NVU0 708 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 PASKQ96RG2 1323 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 MYCLP12524 364 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 ADAM9Q13443 819 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 ATP2A3Q93084 1043 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 STAP2Q9UGK3 403 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 TTLL3Q9Y4R7 772 aa11.16□□□□□ -0.62
GTF3C1-202ENST00000561623 CYP21A2P08686 494 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 MX2P20592 715 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 CCDC144BQ3MJ40 725 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 LARSQ9P2J5 1176 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 TBK1Q9UHD2 729 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 YTHDC2Q9H6S0 1430 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 PEG3Q9GZU2 1588 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 SRGAP2O75044 1071 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 CYP27A1Q02318 531 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 SNX1Q13596 522 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 PPP2R5EQ16537 467 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 ACTR5Q9H9F9 607 aaPredicted RBP11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 NHEJ1Q9H9Q4 299 aaPredicted RBP11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 TNKSO95271 1327 aa11.15□□□□□ -0.62
GTF3C1-202ENST00000561623 PPIP5K2O43314 1243 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms