RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 U2AF2P26368 475 aaKnown RBP eCLIP8.66□□□□□ -1.024e-8■■■■■ 38.8
TPM1-231ENST00000561395 MAGEA10P43363 369 aaPredicted RBP8.66□□□□□ -1.02
TPM1-231ENST00000561395 TNNI2P48788 182 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 PPIL2Q13356 520 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 SLC35G1Q2M3R5 365 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 CERKLQ49MI3 558 aaPredicted RBP8.66□□□□□ -1.02
TPM1-231ENST00000561395 MYSM1Q5VVJ2 828 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 NECAB2Q7Z6G3 386 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 ERO1BQ86YB8 467 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 CLEC10AQ8IUN9 316 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 STAG2Q8N3U4 1231 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 DIS3LQ8TF46 1054 aaKnown RBP8.66□□□□□ -1.02
TPM1-231ENST00000561395 SPATA32Q96LK8 384 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 GUCD1Q96NT3 240 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 DEFB118Q96PH6 123 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 TMEM39BQ9GZU3 492 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 TFIP11Q9UBB9 837 aaKnown RBP8.66□□□□□ -1.02
TPM1-231ENST00000561395 HERC5Q9UII4 1024 aaKnown RBP8.66□□□□□ -1.02
TPM1-231ENST00000561395 CFAP45Q9UL16 551 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 GABRQQ9UN88 632 aa8.66□□□□□ -1.02
TPM1-231ENST00000561395 BAZ2BQ9UIF8 2168 aaKnown RBP8.65□□□□□ -1.02
TPM1-231ENST00000561395 hCG_1642624A0A1W2PR95 340 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 USP17L5A8MUK1 530 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 ADCY3O60266 1144 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 PARP1P09874 1014 aaKnown RBP8.65□□□□□ -1.02
TPM1-231ENST00000561395 SNHG28P0DPA3 235 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 PDHBP11177 359 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 SCG2P13521 617 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 ELNP15502 786 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 CAPN2P17655 700 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 XBP1P17861 261 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 FCGRTP55899 365 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 GNL2Q13823 731 aaKnown RBP8.65□□□□□ -1.02
TPM1-231ENST00000561395 SAFBQ15424 915 aaKnown RBP eCLIP8.65□□□□□ -1.02
TPM1-231ENST00000561395 PFKFB3Q16875 520 aaPredicted RBP8.65□□□□□ -1.02
TPM1-231ENST00000561395 SHROOM1Q2M3G4 852 aaPredicted RBP8.65□□□□□ -1.02
TPM1-231ENST00000561395 ASPRV1Q53RT3 343 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 CAVIN1Q6NZI2 390 aaKnown RBP8.65□□□□□ -1.02
TPM1-231ENST00000561395 TMEM179Q6ZVK1 233 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 RASGRP2Q7LDG7 609 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 LRRC47Q8N1G4 583 aaKnown RBP8.65□□□□□ -1.02
TPM1-231ENST00000561395 ZKSCAN4Q969J2 545 aaPredicted RBP8.65□□□□□ -1.02
TPM1-231ENST00000561395 USP28Q96RU2 1077 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 WRNIP1Q96S55 665 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 PHF20Q9BVI0 1012 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 SPZ1Q9BXG8 430 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 FTOQ9C0B1 505 aaKnown RBP eCLIP8.65□□□□□ -1.02
TPM1-231ENST00000561395 UBE2OQ9C0C9 1292 aaKnown RBP8.65□□□□□ -1.02
TPM1-231ENST00000561395 CRISPLD2Q9H0B8 497 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 GZF1Q9H116 711 aaPredicted RBP8.65□□□□□ -1.02
TPM1-231ENST00000561395 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.65□□□□□ -1.02
TPM1-231ENST00000561395 PAK6Q9NQU5 681 aaPredicted RBP8.65□□□□□ -1.02
TPM1-231ENST00000561395 RTEL1Q9NZ71 1219 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 VPS54Q9P1Q0 977 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 NYAP2Q9P242 653 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 CLIP2Q9UDT6 1046 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 KCNJ14Q9UNX9 436 aa8.65□□□□□ -1.02
TPM1-231ENST00000561395 V9GY48 417 aaPredicted RBP8.65□□□□□ -1.02
TPM1-231ENST00000561395 MUC3AQ02505 3323 aa8.65□□□□□ -1.03
TPM1-231ENST00000561395 DNAH12Q6ZR08 3092 aa8.65□□□□□ -1.03
TPM1-231ENST00000561395 KLRF2D3W0D1 207 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 PDHXO00330 501 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 CYTH3O43739 400 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 TBC1D12O60347 775 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 GDF11O95390 407 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 SMARCA1P28370 1054 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 NASPP49321 788 aaPredicted RBP8.64□□□□□ -1.03
TPM1-231ENST00000561395 ICA1Q05084 483 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 ABCB5Q2M3G0 1257 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 USP17L2Q6R6M4 530 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 ANKRD23Q86SG2 305 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 NOSTRINQ8IVI9 506 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 DIS3L2Q8IYB7 885 aaKnown RBP8.64□□□□□ -1.03
TPM1-231ENST00000561395 MKL1Q969V6 931 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 FAM161BQ96MY7 647 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 PHF12Q96QT6 1004 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 FOXP1Q9H334 677 aaPredicted RBP8.64□□□□□ -1.03
TPM1-231ENST00000561395 KANSL2Q9H9L4 492 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 POLR3EQ9NVU0 708 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 RCOR1Q9UKL0 485 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 PCDHB8Q9UN66 801 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 MTMR7Q9Y216 660 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 PCDHB13Q9Y5F0 798 aa8.64□□□□□ -1.03
TPM1-231ENST00000561395 BTBD18B2RXH4 712 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 YEATS4O95619 227 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 GH2P01242 217 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 GOLGA8HP0CJ92 632 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 BCRP11274 1271 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 EEF2P13639 858 aaKnown RBP8.63□□□□□ -1.03
TPM1-231ENST00000561395 KRT2P35908 639 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 JAG1P78504 1218 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 ATP2B2Q01814 1243 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 MAP3K10Q02779 954 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 CEBPZQ03701 1054 aaKnown RBP8.63□□□□□ -1.03
TPM1-231ENST00000561395 ZNF543Q08ER8 600 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 RRP1BQ14684 758 aaKnown RBP8.63□□□□□ -1.03
TPM1-231ENST00000561395 SEPT2Q15019 361 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 NPY5RQ15761 445 aa8.63□□□□□ -1.03
TPM1-231ENST00000561395 FAM177A1Q8N128 213 aaPredicted RBP8.63□□□□□ -1.03
TPM1-231ENST00000561395 KCNG4Q8TDN1 519 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms