RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 KCNB2Q92953 911 aa15.44■□□□□ 0.06
SMAD3-213ENST00000560175 CPVLQ9H3G5 476 aa15.44■□□□□ 0.06
SMAD3-213ENST00000560175 ABHD16BQ9H3Z7 469 aa15.44■□□□□ 0.06
SMAD3-213ENST00000560175 C11orf49Q9H6J7 331 aa15.44■□□□□ 0.06
SMAD3-213ENST00000560175 JMJD4Q9H9V9 463 aa15.44■□□□□ 0.06
SMAD3-213ENST00000560175 ANO2Q9NQ90 1003 aa15.44■□□□□ 0.06
SMAD3-213ENST00000560175 NFIBO00712 420 aa15.43■□□□□ 0.06
SMAD3-213ENST00000560175 NKX3-2P78367 333 aa15.43■□□□□ 0.06
SMAD3-213ENST00000560175 ACVR2BQ13705 512 aa15.43■□□□□ 0.06
SMAD3-213ENST00000560175 GRM4Q14833 912 aa15.43■□□□□ 0.06
SMAD3-213ENST00000560175 WTAPQ15007 396 aa15.43■□□□□ 0.06
SMAD3-213ENST00000560175 SART3Q15020 963 aaKnown RBP15.43■□□□□ 0.06
SMAD3-213ENST00000560175 CCDC144CPQ8IYA2 1237 aa15.43■□□□□ 0.06
SMAD3-213ENST00000560175 TMTC2Q8N394 836 aa15.43■□□□□ 0.06
SMAD3-213ENST00000560175 RIOX1Q9H6W3 641 aa15.43■□□□□ 0.06
SMAD3-213ENST00000560175 LY9Q9HBG7 655 aa15.43■□□□□ 0.06
SMAD3-213ENST00000560175 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.43■□□□□ 0.06
SMAD3-213ENST00000560175 CNPY2Q9Y2B0 182 aa15.43■□□□□ 0.06
SMAD3-213ENST00000560175 BAZ2BQ9UIF8 2168 aaKnown RBP15.43■□□□□ 0.06
SMAD3-213ENST00000560175 ERICH2A1L162 156 aa15.42■□□□□ 0.06
SMAD3-213ENST00000560175 ASB14A6NK59 587 aa15.42■□□□□ 0.06
SMAD3-213ENST00000560175 KLRF2D3W0D1 207 aa15.42■□□□□ 0.06
SMAD3-213ENST00000560175 AKR1A1P14550 325 aa15.42■□□□□ 0.06
SMAD3-213ENST00000560175 MCM5P33992 734 aa15.42■□□□□ 0.06
SMAD3-213ENST00000560175 LIFRP42702 1097 aa15.42■□□□□ 0.06
SMAD3-213ENST00000560175 BAATQ14032 418 aaPredicted RBP15.42■□□□□ 0.06
SMAD3-213ENST00000560175 SLC35G1Q2M3R5 365 aa15.42■□□□□ 0.06
SMAD3-213ENST00000560175 CASC1Q6TDU7 716 aa15.42■□□□□ 0.06
SMAD3-213ENST00000560175 ARMCX2Q7L311 632 aa15.42■□□□□ 0.06
SMAD3-213ENST00000560175 CHST3Q7LGC8 479 aa15.42■□□□□ 0.06
SMAD3-213ENST00000560175 DPF3Q92784 378 aa15.42■□□□□ 0.06
SMAD3-213ENST00000560175 TMEM87BQ96K49 555 aa15.42■□□□□ 0.06
SMAD3-213ENST00000560175 H0YGN5 161 aa15.41■□□□□ 0.06
SMAD3-213ENST00000560175 CENPBP07199 599 aaPredicted RBP15.41■□□□□ 0.06
SMAD3-213ENST00000560175 SMARCA1P28370 1054 aa15.41■□□□□ 0.06
SMAD3-213ENST00000560175 GHRHRQ02643 423 aa15.41■□□□□ 0.06
SMAD3-213ENST00000560175 LRRC41Q15345 812 aa15.41■□□□□ 0.06
SMAD3-213ENST00000560175 CDC37Q16543 378 aaPredicted RBP15.41■□□□□ 0.06
SMAD3-213ENST00000560175 TMEM67Q5HYA8 995 aa15.41■□□□□ 0.06
SMAD3-213ENST00000560175 KLHDC9Q8NEP7 349 aa15.41■□□□□ 0.06
SMAD3-213ENST00000560175 FAM184BQ9ULE4 1060 aa15.41■□□□□ 0.06
SMAD3-213ENST00000560175 NR2E3Q9Y5X4 410 aa15.41■□□□□ 0.06
SMAD3-213ENST00000560175 LRRC37A2A6NM11 1700 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 SH2B2O14492 632 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-213ENST00000560175 ADCY6O43306 1168 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 EPB41L2O43491 1005 aaKnown RBP15.4■□□□□ 0.06
SMAD3-213ENST00000560175 PRC1O43663 620 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 CYTH3O43739 400 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 ADAMTS4O75173 837 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 DUSP11O75319 330 aaKnown RBP15.4■□□□□ 0.06
SMAD3-213ENST00000560175 RARBP10826 455 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 RPS6P62753 249 aaKnown RBP15.4■□□□□ 0.06
SMAD3-213ENST00000560175 EXOSC10Q01780 885 aaKnown RBP15.4■□□□□ 0.06
SMAD3-213ENST00000560175 QRICH1Q2TAL8 776 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 RNF20Q5VTR2 975 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 C1orf53Q5VUE5 145 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 ANO1Q5XXA6 986 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 CCSAPQ6IQ19 270 aaPredicted RBP15.4■□□□□ 0.06
SMAD3-213ENST00000560175 NSMFQ6X4W1 530 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 SGMS1Q86VZ5 419 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 RASEFQ8IZ41 740 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 ADD3Q9UEY8 706 aaKnown RBP15.4■□□□□ 0.06
SMAD3-213ENST00000560175 RANBP2P49792 3224 aaKnown RBP15.4■□□□□ 0.06
SMAD3-213ENST00000560175 ABCB11O95342 1321 aa15.4■□□□□ 0.06
SMAD3-213ENST00000560175 EVI5O60447 810 aa15.39■□□□□ 0.05
SMAD3-213ENST00000560175 EDNRBP24530 442 aa15.39■□□□□ 0.05
SMAD3-213ENST00000560175 CST5P28325 142 aaPredicted RBP15.39■□□□□ 0.05
SMAD3-213ENST00000560175 SNX17Q15036 470 aa15.39■□□□□ 0.05
SMAD3-213ENST00000560175 CCDC144BQ3MJ40 725 aa15.39■□□□□ 0.05
SMAD3-213ENST00000560175 GJC2Q5T442 439 aaPredicted RBP15.39■□□□□ 0.05
SMAD3-213ENST00000560175 TAPT1Q6NXT6 567 aa15.39■□□□□ 0.05
SMAD3-213ENST00000560175 RNF207Q6ZRF8 634 aa15.39■□□□□ 0.05
SMAD3-213ENST00000560175 FBXO11Q86XK2 927 aa15.39■□□□□ 0.05
SMAD3-213ENST00000560175 DNERQ8NFT8 737 aa15.39■□□□□ 0.05
SMAD3-213ENST00000560175 PURBQ96QR8 312 aaKnown RBP15.39■□□□□ 0.05
SMAD3-213ENST00000560175 TSEN34Q9BSV6 310 aaKnown RBP15.39■□□□□ 0.05
SMAD3-213ENST00000560175 UPF3AQ9H1J1 476 aaKnown RBP15.39■□□□□ 0.05
SMAD3-213ENST00000560175 PRO3102Q9H379 93 aa15.39■□□□□ 0.05
SMAD3-213ENST00000560175 XPNPEP3Q9NQH7 507 aa15.39■□□□□ 0.05
SMAD3-213ENST00000560175 GPHNQ9NQX3 736 aaPredicted RBP15.39■□□□□ 0.05
SMAD3-213ENST00000560175 PHF24Q9UPV7 400 aa15.39■□□□□ 0.05
SMAD3-213ENST00000560175 RBM47A0AV96 593 aaKnown RBP15.38■□□□□ 0.05
SMAD3-213ENST00000560175 OPLAHO14841 1288 aa15.38■□□□□ 0.05
SMAD3-213ENST00000560175 ZBTB5O15062 677 aa15.38■□□□□ 0.05
SMAD3-213ENST00000560175 PPP1R11O60927 126 aaPredicted RBP15.38■□□□□ 0.05
SMAD3-213ENST00000560175 DDAH1O94760 285 aa15.38■□□□□ 0.05
SMAD3-213ENST00000560175 ALDH5A1P51649 535 aaPredicted RBP15.38■□□□□ 0.05
SMAD3-213ENST00000560175 GJA9P57773 515 aa15.38■□□□□ 0.05
SMAD3-213ENST00000560175 LRRC26Q2I0M4 334 aa15.38■□□□□ 0.05
SMAD3-213ENST00000560175 CATIPQ7Z7H3 387 aa15.38■□□□□ 0.05
SMAD3-213ENST00000560175 ZNF654Q8IZM8 581 aa15.38■□□□□ 0.05
SMAD3-213ENST00000560175 SAMD3Q8N6K7 520 aa15.38■□□□□ 0.05
SMAD3-213ENST00000560175 TBC1D5Q92609 795 aa15.38■□□□□ 0.05
SMAD3-213ENST00000560175 NEK1Q96PY6 1258 aa15.38■□□□□ 0.05
SMAD3-213ENST00000560175 AMNQ9BXJ7 453 aa15.38■□□□□ 0.05
SMAD3-213ENST00000560175 SENP6Q9GZR1 1112 aaPredicted RBP15.38■□□□□ 0.05
SMAD3-213ENST00000560175 VAT1LQ9HCJ6 419 aa15.38■□□□□ 0.05
SMAD3-213ENST00000560175 MAP3K20Q9NYL2 800 aaKnown RBP15.38■□□□□ 0.05
SMAD3-213ENST00000560175 GNEQ9Y223 722 aaKnown RBP15.38■□□□□ 0.05
SMAD3-213ENST00000560175 MRPL11Q9Y3B7 192 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms