RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 SUSD5O60279 629 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 RFPL3O75679 317 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 SLC7A5Q01650 507 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 C21orf62-AS1Q17RA5 79 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 TM4SF20Q53R12 229 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 HSP90AB2PQ58FF8 381 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 KIAA1211LQ6NV74 962 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 FERMT3Q86UX7 667 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 IL22RA1Q8N6P7 574 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 ELMO3Q96BJ8 720 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 SGSM3Q96HU1 749 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 SLC9A7Q96T83 725 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 NRSN2Q9GZP1 204 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 HOMER2Q9NSB8 354 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 G3BP2Q9UN86 482 aaKnown RBP6.2□□□□□ -1.42
TPM1-222ENST00000560131 FANCAO15360 1455 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 COL3A1P02461 1466 aaPredicted RBP6.2□□□□□ -1.42
TPM1-222ENST00000560131 KIF1BO60333 1816 aa6.2□□□□□ -1.42
TPM1-222ENST00000560131 AK9Q5TCS8 1911 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 ELOA3CA0A087WX78 387 aaPredicted RBP6.19□□□□□ -1.42
TPM1-222ENST00000560131 ELOA3DA6NLF2 546 aaPredicted RBP6.19□□□□□ -1.42
TPM1-222ENST00000560131 ADCY3O60266 1144 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 ZNF862O60290 1169 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 DNAJA2O60884 412 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 ECEL1O95672 775 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 MAOBP27338 520 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 CDC25BP30305 580 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 CHAF1AQ13111 956 aaPredicted RBP6.19□□□□□ -1.42
TPM1-222ENST00000560131 CUL4AQ13619 759 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 ATP2B3Q16720 1220 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 SLC10A6Q3KNW5 377 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 RGL3Q3MIN7 710 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 ELOA3BQ3SY89 546 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 PRRT3Q5FWE3 981 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 NIM1KQ8IY84 436 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 ELOA3Q8NG57 546 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 CHAC2Q8WUX2 184 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 MFSD3Q96ES6 412 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 FMNL2Q96PY5 1086 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 USP26Q9BXU7 913 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 SMC4Q9NTJ3 1288 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 ADAM30Q9UKF2 790 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 PCDHB10Q9UN67 800 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 TNNQ9UQP3 1299 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 FAN1Q9Y2M0 1017 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 SUGT1Q9Y2Z0 365 aa6.19□□□□□ -1.42
TPM1-222ENST00000560131 NSD3Q9BZ95 1437 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 QRICH2Q9H0J4 1663 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 CHURC1-FNTBB4DL54 471 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 LINC01387J3KSC0 135 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 AGRPO00253 132 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 PTMAP06454 111 aaKnown RBP6.18□□□□□ -1.42
TPM1-222ENST00000560131 H2AFB1P0C5Y9 115 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 H2AFB2P0C5Z0 115 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 MYCLP1P12525 358 aaPredicted RBP6.18□□□□□ -1.42
TPM1-222ENST00000560131 ALAS2P22557 587 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 CNGA1P29973 690 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 FZD5Q13467 585 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 GRIK5Q16478 980 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 KIF4BQ2VIQ3 1234 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 GNPTABQ3T906 1256 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 THNSL2Q86YJ6 484 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 ITPRIPQ8IWB1 547 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 DHX37Q8IY37 1157 aaKnown RBP6.18□□□□□ -1.42
TPM1-222ENST00000560131 TMEM57Q8N5G2 664 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 KIAA1524Q8TCG1 905 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 SSH1Q8WYL5 1049 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 KLHL6Q8WZ60 621 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 CEP89Q96ST8 783 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 FAM53CQ9NYF3 392 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 CGNQ9P2M7 1197 aaKnown RBP6.18□□□□□ -1.42
TPM1-222ENST00000560131 ZNF214Q9UL59 606 aaPredicted RBP6.18□□□□□ -1.42
TPM1-222ENST00000560131 NAP1L2Q9ULW6 460 aaPredicted RBP6.18□□□□□ -1.42
TPM1-222ENST00000560131 ATP8A1Q9Y2Q0 1164 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 ZDHHC9Q9Y397 364 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 MORC2Q9Y6X9 1032 aaPredicted RBP6.18□□□□□ -1.42
TPM1-222ENST00000560131 TUBGCP6Q96RT7 1819 aa6.18□□□□□ -1.42
TPM1-222ENST00000560131 CD109Q6YHK3 1445 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 SSH2Q76I76 1423 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 ABCC1P33527 1531 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 SYCE3A1L190 88 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 DCDC2CA8MYV0 355 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 TULP2O00295 520 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 FSCN2O14926 492 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 KCNQ2O43526 872 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 PGRP06401 933 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 LIG1P18858 919 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 GRK4P32298 578 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 STAT3P40763 770 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 CCNFP41002 786 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 HNRNPMP52272 730 aaKnown RBP eCLIP6.17□□□□□ -1.42
TPM1-222ENST00000560131 ZNF143P52747 638 aaPredicted RBP6.17□□□□□ -1.42
TPM1-222ENST00000560131 CBX1P83916 185 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 PABPC4Q13310 644 aaKnown RBP eCLIP6.17□□□□□ -1.42
TPM1-222ENST00000560131 MORC1Q86VD1 984 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 FCHSD1Q86WN1 690 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 C12orf40Q86WS4 652 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 JAMLQ86YT9 394 aa6.17□□□□□ -1.42
TPM1-222ENST00000560131 PRPF38AQ8NAV1 312 aaKnown RBP6.17□□□□□ -1.42
TPM1-222ENST00000560131 NUDT8Q8WV74 236 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms