RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 PFASO15067 1338 aa15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 SGPL1O95470 568 aa15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 FGD1P98174 961 aa15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 MSL3Q8N5Y2 521 aaKnown RBP15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 U2AF1L4Q8WU68 220 aaKnown RBP15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 DEFB118Q96PH6 123 aa15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 MYL10Q9BUA6 226 aa15.9■□□□□ 0.14
CHRNB4-204ENST00000559849 MKI67P46013 3256 aaKnown RBP15.89■□□□□ 0.13
CHRNB4-204ENST00000559849 POTEB2H3BUK9 544 aa15.89■□□□□ 0.13
CHRNB4-204ENST00000559849 GNAQP50148 359 aa15.89■□□□□ 0.13
CHRNB4-204ENST00000559849 QRICH1Q2TAL8 776 aa15.89■□□□□ 0.13
CHRNB4-204ENST00000559849 FBXO11Q86XK2 927 aa15.89■□□□□ 0.13
CHRNB4-204ENST00000559849 MTMR8Q96EF0 704 aa15.89■□□□□ 0.13
CHRNB4-204ENST00000559849 CYP39A1Q9NYL5 469 aa15.89■□□□□ 0.13
CHRNB4-204ENST00000559849 ZBTB5O15062 677 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 CASTP20810 708 aaKnown RBP15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 SMARCA1P28370 1054 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 USH1GQ495M9 461 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 NSMFQ6X4W1 530 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 ZNF467Q7Z7K2 595 aaPredicted RBP15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 LZTS2Q9BRK4 669 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 CPA1P15085 419 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 RPS6KB1P23443 525 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 CCND3P30281 292 aaPredicted RBP15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 TRAF1Q13077 416 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 APOA5Q6Q788 366 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 MAMDC4Q6UXC1 1216 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 FBXL16Q8N461 479 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 FAM133AQ8N9E0 248 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 FANCBQ8NB91 859 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 AMNQ9BXJ7 453 aa15.88■□□□□ 0.13
CHRNB4-204ENST00000559849 NFIBO00712 420 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 CYTH3O43739 400 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 TFRCP02786 760 aaKnown RBP15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 TAL1P17542 331 aaPredicted RBP15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 RXRAP19793 462 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 CNTN2Q02246 1040 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 CLEC4DQ8WXI8 215 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 TM6SF1Q9BZW5 370 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 MAF1Q9H063 256 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 ABCB11O95342 1321 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 CNGA1P29973 690 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 BAATQ14032 418 aaPredicted RBP15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 SLC35G1Q2M3R5 365 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 Q6ZUG5 572 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 RUFY3Q7L099 469 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 MICU3Q86XE3 530 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 HOMER1Q86YM7 354 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 RGS22Q8NE09 1264 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 PIGSQ96S52 555 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 SPZ1Q9BXG8 430 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 CRISPLD2Q9H0B8 497 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 ZSWIM6Q9HCJ5 1215 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 NRBP1Q9UHY1 535 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 BRPF3Q9ULD4 1205 aa15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 MRPL11Q9Y3B7 192 aaKnown RBP15.87■□□□□ 0.13
CHRNB4-204ENST00000559849 SYNGAP1Q96PV0 1343 aa15.86■□□□□ 0.13
CHRNB4-204ENST00000559849 PNMA6FA0A0J9YX94 578 aa15.86■□□□□ 0.13
CHRNB4-204ENST00000559849 PTPDC1A2A3K4 754 aa15.86■□□□□ 0.13
CHRNB4-204ENST00000559849 ZBTB43O43298 467 aa15.86■□□□□ 0.13
CHRNB4-204ENST00000559849 MSCO60682 206 aa15.86■□□□□ 0.13
CHRNB4-204ENST00000559849 CYBAP13498 195 aa15.86■□□□□ 0.13
CHRNB4-204ENST00000559849 RNF207Q6ZRF8 634 aa15.86■□□□□ 0.13
CHRNB4-204ENST00000559849 CCDC144CPQ8IYA2 1237 aa15.86■□□□□ 0.13
CHRNB4-204ENST00000559849 CNPY2Q9Y2B0 182 aa15.86■□□□□ 0.13
CHRNB4-204ENST00000559849 CYP46A1Q9Y6A2 500 aa15.86■□□□□ 0.13
CHRNB4-204ENST00000559849 RCAN1P53805 252 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 ANAPC15P60006 121 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 MLLT1Q03111 559 aaPredicted RBP15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 PRAMEF19Q5SWL8 479 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 MCF2L2Q86YR7 1114 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 FGD4Q96M96 766 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 AGXT2Q9BYV1 514 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 PCDHA1Q9Y5I3 950 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 KLF18A0A0U1RQI7 1052 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 SOWAHBA6NEL2 793 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 RPS6P62753 249 aaKnown RBP15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 PPP2R5BQ15173 497 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 LHX8Q68G74 356 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 RAB11FIP4Q86YS3 637 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 SRBD1Q8N5C6 995 aaKnown RBP15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 TRPV1Q8NER1 839 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 BRF1Q92994 677 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 SHISA4Q96DD7 197 aa15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 RRP36Q96EU6 259 aaKnown RBP15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 RBM28Q9NW13 759 aaKnown RBP15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 ADD3Q9UEY8 706 aaKnown RBP15.85■□□□□ 0.13
CHRNB4-204ENST00000559849 PDE4DIPQ5VU43 2346 aa15.84■□□□□ 0.13
CHRNB4-204ENST00000559849 MCM3APO60318 1980 aa15.84■□□□□ 0.13
CHRNB4-204ENST00000559849 ASB14A6NK59 587 aa15.84■□□□□ 0.13
CHRNB4-204ENST00000559849 SEPT4O43236 478 aa15.84■□□□□ 0.13
CHRNB4-204ENST00000559849 SEC24BO95487 1268 aa15.84■□□□□ 0.13
CHRNB4-204ENST00000559849 DDX20Q9UHI6 824 aaKnown RBP15.84■□□□□ 0.13
CHRNB4-204ENST00000559849 PPP1R11O60927 126 aaPredicted RBP15.83■□□□□ 0.13
CHRNB4-204ENST00000559849 PLEKHA8P1O95397 391 aa15.83■□□□□ 0.13
CHRNB4-204ENST00000559849 SNAI1O95863 264 aaPredicted RBP15.83■□□□□ 0.13
CHRNB4-204ENST00000559849 CALML3P27482 149 aa15.83■□□□□ 0.13
CHRNB4-204ENST00000559849 APOBRQ0VD83 1088 aa15.83■□□□□ 0.13
CHRNB4-204ENST00000559849 CMTR1Q8N1G2 835 aaKnown RBP15.83■□□□□ 0.13
CHRNB4-204ENST00000559849 ABHD16BQ9H3Z7 469 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms